RNA–Protein interactions for RNA: ENST00000335509.10

TPCN1-201, Transcript of two pore segment channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPCN1, Length 5,274 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPCN1-201ENST00000335509 NUP35Q8NFH5 326 aa13.03□□□□□ -0.32
TPCN1-201ENST00000335509 Q9UFV3 132 aa13.03□□□□□ -0.32
TPCN1-201ENST00000335509 SIGLEC9Q9Y336 463 aa13.03□□□□□ -0.32
TPCN1-201ENST00000335509 NOTCH4Q99466 2003 aa13.03□□□□□ -0.32
TPCN1-201ENST00000335509 C3orf79P0CE67 100 aa13.03□□□□□ -0.32
TPCN1-201ENST00000335509 C5orf64Q2M2E5 130 aa13.03□□□□□ -0.32
TPCN1-201ENST00000335509 TRGV9Q99603 122 aa13.03□□□□□ -0.32
TPCN1-201ENST00000335509 MBD3L4A6NDZ8 208 aaPredicted RBP13.03□□□□□ -0.32
TPCN1-201ENST00000335509 MBD3L3A6NE82 208 aaPredicted RBP13.03□□□□□ -0.32
TPCN1-201ENST00000335509 MBD3L5A6NJ08 208 aaPredicted RBP13.03□□□□□ -0.32
TPCN1-201ENST00000335509 BRD3OSQ6XYD6 125 aa13.03□□□□□ -0.32
TPCN1-201ENST00000335509 MBD3L2Q8NHZ7 208 aaPredicted RBP13.03□□□□□ -0.32
TPCN1-201ENST00000335509 ORMDL2Q53FV1 153 aa13.02□□□□□ -0.32
TPCN1-201ENST00000335509 TPTE2P1Q5T6R2 138 aa13.02□□□□□ -0.32
TPCN1-201ENST00000335509 ORAOV1Q8WV07 137 aa13.02□□□□□ -0.32
TPCN1-201ENST00000335509 RNASE2P10153 161 aaKnown RBP13.02□□□□□ -0.33
TPCN1-201ENST00000335509 NDPQ00604 133 aa13.02□□□□□ -0.33
TPCN1-201ENST00000335509 TRBV7-9A0A0J9YWB2 115 aa13.02□□□□□ -0.33
TPCN1-201ENST00000335509 DPH3Q96FX2 82 aa13.02□□□□□ -0.33
TPCN1-201ENST00000335509 LIME1Q9H400 295 aa13.02□□□□□ -0.33
TPCN1-201ENST00000335509 ZNF815PA8K554 130 aa13.02□□□□□ -0.33
TPCN1-201ENST00000335509 C1orf194Q5T5A4 169 aa13.02□□□□□ -0.33
TPCN1-201ENST00000335509 SAMD13Q5VXD3 122 aa13.02□□□□□ -0.33
TPCN1-201ENST00000335509 SIGLEC15Q6ZMC9 328 aa13.02□□□□□ -0.33
TPCN1-201ENST00000335509 TSPAN13O95857 204 aa13.01□□□□□ -0.33
TPCN1-201ENST00000335509 ZNF688P0C7X2 276 aa13.01□□□□□ -0.33
TPCN1-201ENST00000335509 COL4A6Q14031 1691 aa13.01□□□□□ -0.33
TPCN1-201ENST00000335509 FREM1Q5H8C1 2179 aa13.01□□□□□ -0.33
TPCN1-201ENST00000335509 CNTFRP26992 372 aa13.01□□□□□ -0.33
TPCN1-201ENST00000335509 MCRIP2Q9BUT9 160 aaKnown RBP13.01□□□□□ -0.33
TPCN1-201ENST00000335509 IGHV3-64A0A075B6Q5 118 aa13□□□□□ -0.33
TPCN1-201ENST00000335509 hDV102S1A0JD36 115 aa13□□□□□ -0.33
TPCN1-201ENST00000335509 IGKCP01834 107 aa13□□□□□ -0.33
TPCN1-201ENST00000335509 IGHG3P01860 377 aa13□□□□□ -0.33
TPCN1-201ENST00000335509 PEMTQ9UBM1 199 aa13□□□□□ -0.33
TPCN1-201ENST00000335509 Q6ZS92 163 aa13□□□□□ -0.33
TPCN1-201ENST00000335509 OTOGLQ3ZCN5 2332 aa13□□□□□ -0.33
TPCN1-201ENST00000335509 TRAV2A0A0B4J234 112 aa13□□□□□ -0.33
TPCN1-201ENST00000335509 SRRM4A7MD48 611 aaKnown RBP13□□□□□ -0.33
TPCN1-201ENST00000335509 DUSP14O95147 198 aaKnown RBP13□□□□□ -0.33
TPCN1-201ENST00000335509 STHQ8IWL8 128 aa13□□□□□ -0.33
TPCN1-201ENST00000335509 YAE1D1Q9NRH1 226 aa13□□□□□ -0.33
TPCN1-201ENST00000335509 H3BUX3 64 aa12.99□□□□□ -0.33
TPCN1-201ENST00000335509 ACTL10Q5JWF8 245 aa12.99□□□□□ -0.33
TPCN1-201ENST00000335509 GTSCR1Q86UQ5 136 aa12.99□□□□□ -0.33
TPCN1-201ENST00000335509 HELZP42694 1942 aaKnown RBP12.99□□□□□ -0.33
TPCN1-201ENST00000335509 TRAV12-3A0A0B4J271 114 aa12.99□□□□□ -0.33
TPCN1-201ENST00000335509 CFPP27918 469 aa12.99□□□□□ -0.33
TPCN1-201ENST00000335509 EFNA4P52798 201 aa12.99□□□□□ -0.33
TPCN1-201ENST00000335509 LSM4Q9Y4Z0 139 aaKnown RBP12.99□□□□□ -0.33
TPCN1-201ENST00000335509 BUB1B-PAK6H3BSN5 160 aa12.99□□□□□ -0.33
TPCN1-201ENST00000335509 TDGF1P13385 188 aa12.99□□□□□ -0.33
TPCN1-201ENST00000335509 CHTOPQ9Y3Y2 248 aaKnown RBP12.99□□□□□ -0.33
TPCN1-201ENST00000335509 ABCA2Q9BZC7 2435 aa12.99□□□□□ -0.33
TPCN1-201ENST00000335509 OVOL1O14753 267 aa12.98□□□□□ -0.33
TPCN1-201ENST00000335509 COL8A2P25067 703 aa12.98□□□□□ -0.33
TPCN1-201ENST00000335509 TMEM8BA6NDV4 472 aa12.98□□□□□ -0.33
TPCN1-201ENST00000335509 VDAC2P45880 294 aaPredicted RBP12.98□□□□□ -0.33
TPCN1-201ENST00000335509 ZNF329Q86UD4 541 aa12.98□□□□□ -0.33
TPCN1-201ENST00000335509 ZNF479Q96JC4 524 aa12.98□□□□□ -0.33
TPCN1-201ENST00000335509 ETV2O00321 342 aaPredicted RBP12.98□□□□□ -0.33
TPCN1-201ENST00000335509 ZNF664Q8N3J9 261 aa12.98□□□□□ -0.33
TPCN1-201ENST00000335509 TRAV8-2A0A0B4J237 113 aa12.98□□□□□ -0.33
TPCN1-201ENST00000335509 A0A1B0GUS0 222 aa12.98□□□□□ -0.33
TPCN1-201ENST00000335509 CD28P10747 220 aa12.97□□□□□ -0.33
TPCN1-201ENST00000335509 MPV17L2Q567V2 206 aa12.97□□□□□ -0.33
TPCN1-201ENST00000335509 RPRMLQ8N4K4 120 aa12.97□□□□□ -0.33
TPCN1-201ENST00000335509 A0A1W2PPI3 338 aa12.97□□□□□ -0.33
TPCN1-201ENST00000335509 GUSBP1Q15486 140 aa12.97□□□□□ -0.33
TPCN1-201ENST00000335509 RSPO1Q2MKA7 263 aaPredicted RBP12.97□□□□□ -0.33
TPCN1-201ENST00000335509 BEND2Q8NDZ0 799 aa12.97□□□□□ -0.33
TPCN1-201ENST00000335509 RNF5Q99942 180 aa12.97□□□□□ -0.33
TPCN1-201ENST00000335509 LY96Q9Y6Y9 160 aa12.97□□□□□ -0.33
TPCN1-201ENST00000335509 PAX9P55771 341 aa12.97□□□□□ -0.33
TPCN1-201ENST00000335509 C10orf126Q8N4M7 172 aa12.97□□□□□ -0.33
TPCN1-201ENST00000335509 FNDC1Q4ZHG4 1894 aaPredicted RBP12.97□□□□□ -0.33
TPCN1-201ENST00000335509 PRR14LQ5THK1 2151 aa12.97□□□□□ -0.33
TPCN1-201ENST00000335509 E9PQ18 207 aa12.97□□□□□ -0.33
TPCN1-201ENST00000335509 TMEM249Q2WGJ8 235 aa12.97□□□□□ -0.33
TPCN1-201ENST00000335509 TMEM95Q3KNT9 176 aa12.97□□□□□ -0.33
TPCN1-201ENST00000335509 PROK2Q9HC23 129 aa12.97□□□□□ -0.33
TPCN1-201ENST00000335509 C3orf36Q3SXR2 165 aa12.97□□□□□ -0.33
TPCN1-201ENST00000335509 RNF182Q8N6D2 247 aa12.97□□□□□ -0.33
TPCN1-201ENST00000335509 A0A1B0GV72 72 aa12.96□□□□□ -0.33
TPCN1-201ENST00000335509 PLNP26678 52 aa12.96□□□□□ -0.33
TPCN1-201ENST00000335509 ZNF124Q15973 351 aa12.96□□□□□ -0.33
TPCN1-201ENST00000335509 AMN1Q8IY45 258 aa12.96□□□□□ -0.33
TPCN1-201ENST00000335509 A0A087X0K7 114 aa12.96□□□□□ -0.33
TPCN1-201ENST00000335509 HSD52Q0P140 79 aa12.96□□□□□ -0.33
TPCN1-201ENST00000335509 TRPM7Q96QT4 1865 aa12.96□□□□□ -0.34
TPCN1-201ENST00000335509 PIEZO1Q92508 2521 aa12.96□□□□□ -0.34
TPCN1-201ENST00000335509 SEC11AP67812 179 aa12.96□□□□□ -0.34
TPCN1-201ENST00000335509 ZNF876PQ49A33 203 aa12.96□□□□□ -0.34
TPCN1-201ENST00000335509 MS4A6AQ9H2W1 248 aa12.96□□□□□ -0.34
TPCN1-201ENST00000335509 SMKR1H3BMG3 65 aa12.95□□□□□ -0.34
TPCN1-201ENST00000335509 HOXA3O43365 443 aaPredicted RBP12.95□□□□□ -0.34
TPCN1-201ENST00000335509 MINOS1Q5TGZ0 78 aa12.95□□□□□ -0.34
TPCN1-201ENST00000335509 BCL6BQ8N143 479 aaPredicted RBP12.95□□□□□ -0.34
TPCN1-201ENST00000335509 MINOS1-NBL1R4GNA1 71 aa12.95□□□□□ -0.34
TPCN1-201ENST00000335509 SH2D1AO60880 128 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms