RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 RNF7Q9UBF6 113 aa11.44□□□□□ -0.58
PABPC1-201ENST00000318607 COL27A1Q8IZC6 1860 aaPredicted RBP11.44□□□□□ -0.58
PABPC1-201ENST00000318607 TMEM213A2RRL7 107 aa11.44□□□□□ -0.58
PABPC1-201ENST00000318607 K7ERJ3 54 aa11.44□□□□□ -0.58
PABPC1-201ENST00000318607 MBD6Q96DN6 1003 aa11.44□□□□□ -0.58
PABPC1-201ENST00000318607 PERPQ96FX8 193 aa11.44□□□□□ -0.58
PABPC1-201ENST00000318607 SLC25A10Q9UBX3 287 aaPredicted RBP11.44□□□□□ -0.58
PABPC1-201ENST00000318607 SMAGPQ0VAQ4 97 aa11.43□□□□□ -0.58
PABPC1-201ENST00000318607 C22orf34Q6ZV56 151 aa11.43□□□□□ -0.58
PABPC1-201ENST00000318607 OR1N2Q8NGR9 330 aa11.43□□□□□ -0.58
PABPC1-201ENST00000318607 TNFRSF1AP19438 455 aa11.43□□□□□ -0.58
PABPC1-201ENST00000318607 LRRC10Q5BKY1 277 aa11.43□□□□□ -0.58
PABPC1-201ENST00000318607 PCP2Q8IVA1 136 aa11.43□□□□□ -0.58
PABPC1-201ENST00000318607 OTOGLQ3ZCN5 2332 aa11.43□□□□□ -0.58
PABPC1-201ENST00000318607 EVI2AP22794 236 aa11.43□□□□□ -0.58
PABPC1-201ENST00000318607 MEF2CQ06413 473 aaPredicted RBP11.42□□□□□ -0.58
PABPC1-201ENST00000318607 AMN1Q8IY45 258 aa11.42□□□□□ -0.58
PABPC1-201ENST00000318607 VSTM2AQ8TAG5 236 aa11.42□□□□□ -0.58
PABPC1-201ENST00000318607 FXYD5Q96DB9 178 aa11.42□□□□□ -0.58
PABPC1-201ENST00000318607 AKAP13Q12802 2813 aa11.42□□□□□ -0.58
PABPC1-201ENST00000318607 PRSS1P07477 247 aa11.42□□□□□ -0.58
PABPC1-201ENST00000318607 HES1Q14469 280 aa11.42□□□□□ -0.58
PABPC1-201ENST00000318607 COX19Q49B96 90 aa11.42□□□□□ -0.58
PABPC1-201ENST00000318607 MRPL27Q9P0M9 148 aaKnown RBP11.42□□□□□ -0.58
PABPC1-201ENST00000318607 TMPRSS3P57727 454 aa11.41□□□□□ -0.58
PABPC1-201ENST00000318607 PLP1P60201 277 aa11.41□□□□□ -0.58
PABPC1-201ENST00000318607 TMEM97Q5BJF2 176 aa11.41□□□□□ -0.58
PABPC1-201ENST00000318607 IGHV3-49A0A0A0MS15 119 aa11.41□□□□□ -0.58
PABPC1-201ENST00000318607 TRGV8A0A0C4DH27 118 aa11.41□□□□□ -0.58
PABPC1-201ENST00000318607 OR2J3O76001 311 aa11.41□□□□□ -0.58
PABPC1-201ENST00000318607 LIPFP07098 398 aa11.41□□□□□ -0.58
PABPC1-201ENST00000318607 KIR2DS2P43631 304 aa11.41□□□□□ -0.58
PABPC1-201ENST00000318607 SUB1P53999 127 aaKnown RBP eCLIP11.41□□□□□ -0.581e-11■□□□□ 9.5
PABPC1-201ENST00000318607 Q8TAT8 98 aa11.41□□□□□ -0.58
PABPC1-201ENST00000318607 GUCD1Q96NT3 240 aa11.41□□□□□ -0.58
PABPC1-201ENST00000318607 KLK15Q9H2R5 256 aa11.41□□□□□ -0.58
PABPC1-201ENST00000318607 FBXL15Q9H469 300 aa11.41□□□□□ -0.58
PABPC1-201ENST00000318607 C1RLQ9NZP8 487 aa11.41□□□□□ -0.58
PABPC1-201ENST00000318607 PTPRBP23467 1997 aa11.41□□□□□ -0.58
PABPC1-201ENST00000318607 IGHV3-66A0A0C4DH42 116 aa11.41□□□□□ -0.58
PABPC1-201ENST00000318607 C21orf140B9A014 251 aa11.41□□□□□ -0.58
PABPC1-201ENST00000318607 D6R8Y8 96 aa11.41□□□□□ -0.58
PABPC1-201ENST00000318607 SCGB2A2Q13296 93 aa11.41□□□□□ -0.58
PABPC1-201ENST00000318607 RBPMS2Q6ZRY4 209 aaKnown RBP11.41□□□□□ -0.58
PABPC1-201ENST00000318607 TMEM75Q8N9X5 138 aa11.41□□□□□ -0.58
PABPC1-201ENST00000318607 DDB2Q92466 427 aa11.41□□□□□ -0.58
PABPC1-201ENST00000318607 PEF1Q9UBV8 284 aaKnown RBP11.41□□□□□ -0.58
PABPC1-201ENST00000318607 RABAC1Q9UI14 185 aa11.41□□□□□ -0.58
PABPC1-201ENST00000318607 CHD8Q9HCK8 2581 aa11.4□□□□□ -0.58
PABPC1-201ENST00000318607 A0A1W2PPI3 338 aa11.4□□□□□ -0.58
PABPC1-201ENST00000318607 FCGR2BP31994 310 aaPredicted RBP11.4□□□□□ -0.58
PABPC1-201ENST00000318607 MBNL2Q5VZF2 373 aaKnown RBP11.4□□□□□ -0.58
PABPC1-201ENST00000318607 LYPD2Q6UXB3 125 aa11.4□□□□□ -0.58
PABPC1-201ENST00000318607 PNKDQ8N490 385 aa11.4□□□□□ -0.58
PABPC1-201ENST00000318607 SPRY2O43597 315 aa11.4□□□□□ -0.58
PABPC1-201ENST00000318607 TOMM40O96008 361 aa11.4□□□□□ -0.58
PABPC1-201ENST00000318607 IGKV3-15P01624 115 aa11.4□□□□□ -0.58
PABPC1-201ENST00000318607 HSPB8Q9UJY1 196 aa11.4□□□□□ -0.58
PABPC1-201ENST00000318607 ST20Q9HBF5 79 aa11.4□□□□□ -0.59
PABPC1-201ENST00000318607 SPCS1Q9Y6A9 102 aa11.4□□□□□ -0.59
PABPC1-201ENST00000318607 LY96Q9Y6Y9 160 aa11.4□□□□□ -0.59
PABPC1-201ENST00000318607 TCRBV4S1A1TA0A5B7 111 aa11.39□□□□□ -0.59
PABPC1-201ENST00000318607 TCRAP04437 139 aa11.39□□□□□ -0.59
PABPC1-201ENST00000318607 CSN1S1P47710 185 aa11.39□□□□□ -0.59
PABPC1-201ENST00000318607 KIR3DS1Q14943 382 aa11.39□□□□□ -0.59
PABPC1-201ENST00000318607 OR4A5Q8NH83 315 aa11.39□□□□□ -0.59
PABPC1-201ENST00000318607 PRR7Q8TB68 274 aa11.39□□□□□ -0.59
PABPC1-201ENST00000318607 COLQQ9Y215 455 aaPredicted RBP11.39□□□□□ -0.59
PABPC1-201ENST00000318607 OR10AG1Q8NH19 301 aa11.39□□□□□ -0.59
PABPC1-201ENST00000318607 ADTRPQ96IZ2 230 aa11.39□□□□□ -0.59
PABPC1-201ENST00000318607 CT45A10P0DMU9 189 aa11.39□□□□□ -0.59
PABPC1-201ENST00000318607 TWIST1Q15672 202 aa11.39□□□□□ -0.59
PABPC1-201ENST00000318607 DEFB125Q8N687 156 aa11.39□□□□□ -0.59
PABPC1-201ENST00000318607 C5orf17Q8NAS9 161 aa11.39□□□□□ -0.59
PABPC1-201ENST00000318607 MDS2Q8NDY4 140 aa11.39□□□□□ -0.59
PABPC1-201ENST00000318607 C8orf49Q96NF6 230 aa11.39□□□□□ -0.59
PABPC1-201ENST00000318607 A0A1B0GUT8 65 aa11.38□□□□□ -0.59
PABPC1-201ENST00000318607 SONP18583 2426 aaKnown RBP11.38□□□□□ -0.59
PABPC1-201ENST00000318607 SPAARA0A1B0GVQ0 90 aa11.38□□□□□ -0.59
PABPC1-201ENST00000318607 TGFAP01135 160 aa11.38□□□□□ -0.59
PABPC1-201ENST00000318607 ORM1P02763 201 aa11.38□□□□□ -0.59
PABPC1-201ENST00000318607 TMEM249Q2WGJ8 235 aa11.38□□□□□ -0.59
PABPC1-201ENST00000318607 FAM120AOSQ5T036 256 aa11.38□□□□□ -0.59
PABPC1-201ENST00000318607 MRPL52Q86TS9 123 aaKnown RBP11.38□□□□□ -0.59
PABPC1-201ENST00000318607 DEFB123Q8N688 67 aa11.38□□□□□ -0.59
PABPC1-201ENST00000318607 FER1L6-AS1Q8NA97 138 aa11.38□□□□□ -0.59
PABPC1-201ENST00000318607 CENPEQ02224 2701 aa11.38□□□□□ -0.59
PABPC1-201ENST00000318607 F2RL2O00254 374 aa11.37□□□□□ -0.59
PABPC1-201ENST00000318607 C2orf83Q53S99 150 aa11.37□□□□□ -0.59
PABPC1-201ENST00000318607 AMTNQ6UX39 209 aa11.37□□□□□ -0.59
PABPC1-201ENST00000318607 BOD1L2Q8IYS8 172 aa11.37□□□□□ -0.59
PABPC1-201ENST00000318607 BCL6BQ8N143 479 aaPredicted RBP11.37□□□□□ -0.59
PABPC1-201ENST00000318607 ZNF714Q96N38 554 aa11.37□□□□□ -0.59
PABPC1-201ENST00000318607 CUL9Q8IWT3 2517 aa11.37□□□□□ -0.59
PABPC1-201ENST00000318607 A0A0G2JLM5 398 aa11.37□□□□□ -0.59
PABPC1-201ENST00000318607 NPIPB5A8MRT5 1133 aa11.37□□□□□ -0.59
PABPC1-201ENST00000318607 IGHV1-46P01743 117 aa11.37□□□□□ -0.59
PABPC1-201ENST00000318607 OR2K2Q8NGT1 345 aa11.37□□□□□ -0.59
PABPC1-201ENST00000318607 JMJD8Q96S16 334 aa11.37□□□□□ -0.59
PABPC1-201ENST00000318607 DYNLRB1Q9NP97 96 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms