RNA–Protein interactions for RNA: ENST00000316308.8

CLK4-201, Transcript of CDC like kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK4, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-201ENST00000316308 ZNF253O75346 499 aa11.59□□□□□ -0.55
CLK4-201ENST00000316308 LTAP01374 205 aa11.59□□□□□ -0.55
CLK4-201ENST00000316308 PMCHP20382 165 aa11.59□□□□□ -0.55
CLK4-201ENST00000316308 DNLZQ5SXM8 178 aa11.59□□□□□ -0.55
CLK4-201ENST00000316308 STXBP6Q8NFX7 210 aa11.59□□□□□ -0.55
CLK4-201ENST00000316308 RNF125Q96EQ8 232 aa11.59□□□□□ -0.55
CLK4-201ENST00000316308 TBX15Q96SF7 602 aa11.59□□□□□ -0.55
CLK4-201ENST00000316308 A0A1W2PS18 150 aa11.58□□□□□ -0.56
CLK4-201ENST00000316308 OR2T8A6NH00 312 aa11.58□□□□□ -0.56
CLK4-201ENST00000316308 Q0VG73 95 aa11.58□□□□□ -0.56
CLK4-201ENST00000316308 FAM231DQ6ZW35 169 aa11.58□□□□□ -0.56
CLK4-201ENST00000316308 ARPC1AQ92747 370 aa11.58□□□□□ -0.56
CLK4-201ENST00000316308 GRAMD2BQ96HH9 432 aa11.58□□□□□ -0.56
CLK4-201ENST00000316308 SIRPDQ9H106 197 aa11.58□□□□□ -0.56
CLK4-201ENST00000316308 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.58□□□□□ -0.564e-7■■■■■ 47
CLK4-201ENST00000316308 IGLV11-55A0A075B6I3 123 aa11.58□□□□□ -0.56
CLK4-201ENST00000316308 ZNF705FA8MVS1 300 aaPredicted RBP11.58□□□□□ -0.56
CLK4-201ENST00000316308 M0QZ24 198 aa11.58□□□□□ -0.56
CLK4-201ENST00000316308 APCSP02743 223 aa11.58□□□□□ -0.56
CLK4-201ENST00000316308 ZNF705DP0CH99 300 aaPredicted RBP11.58□□□□□ -0.56
CLK4-201ENST00000316308 ZNF705BP0CI00 300 aaPredicted RBP11.58□□□□□ -0.56
CLK4-201ENST00000316308 CEACAM3P40198 252 aa11.58□□□□□ -0.56
CLK4-201ENST00000316308 SAMD10Q9BYL1 202 aa11.58□□□□□ -0.56
CLK4-201ENST00000316308 TOMM40O96008 361 aa11.57□□□□□ -0.56
CLK4-201ENST00000316308 TOMM20LQ6UXN7 152 aa11.57□□□□□ -0.56
CLK4-201ENST00000316308 Q8N6K4 173 aa11.57□□□□□ -0.56
CLK4-201ENST00000316308 OR2D3Q8NGH3 330 aa11.57□□□□□ -0.56
CLK4-201ENST00000316308 VN1R17PQ8TDU5 208 aa11.57□□□□□ -0.56
CLK4-201ENST00000316308 PGLYRP4Q96LB8 373 aa11.57□□□□□ -0.56
CLK4-201ENST00000316308 NOL4LQ96MY1 436 aaPredicted RBP11.57□□□□□ -0.56
CLK4-201ENST00000316308 SHANK2-AS3Q9BTD1 123 aa11.57□□□□□ -0.56
CLK4-201ENST00000316308 CHRDL1Q9BU40 450 aa11.57□□□□□ -0.56
CLK4-201ENST00000316308 ZNF331Q9NQX6 463 aaPredicted RBP11.57□□□□□ -0.56
CLK4-201ENST00000316308 TBL2Q9Y4P3 447 aaKnown RBP11.57□□□□□ -0.56
CLK4-201ENST00000316308 CSPG4Q6UVK1 2322 aa11.57□□□□□ -0.56
CLK4-201ENST00000316308 IGHV7-81A0A0B4J1V7 117 aa11.57□□□□□ -0.56
CLK4-201ENST00000316308 MRPS12O15235 138 aaKnown RBP11.57□□□□□ -0.56
CLK4-201ENST00000316308 HIST1H1EP10412 219 aaKnown RBP11.57□□□□□ -0.56
CLK4-201ENST00000316308 ZNF562Q6V9R5 426 aa11.57□□□□□ -0.56
CLK4-201ENST00000316308 TSKUQ8WUA8 353 aa11.57□□□□□ -0.56
CLK4-201ENST00000316308 TRBV19A0A075B6N1 114 aa11.56□□□□□ -0.56
CLK4-201ENST00000316308 A0A1B0GV90 55 aa11.56□□□□□ -0.56
CLK4-201ENST00000316308 C19orf71A6NCJ1 209 aa11.56□□□□□ -0.56
CLK4-201ENST00000316308 H3BRN7 92 aa11.56□□□□□ -0.56
CLK4-201ENST00000316308 GNG7O60262 68 aa11.56□□□□□ -0.56
CLK4-201ENST00000316308 GPX1P07203 203 aa11.56□□□□□ -0.56
CLK4-201ENST00000316308 IGLC2P0DOY2 106 aa11.56□□□□□ -0.56
CLK4-201ENST00000316308 ESDP10768 282 aa11.56□□□□□ -0.56
CLK4-201ENST00000316308 TPPP2P59282 170 aa11.56□□□□□ -0.56
CLK4-201ENST00000316308 SIGLEC15Q6ZMC9 328 aa11.56□□□□□ -0.56
CLK4-201ENST00000316308 Q86TA4 180 aa11.56□□□□□ -0.56
CLK4-201ENST00000316308 PIP4P2Q8N4L2 257 aa11.56□□□□□ -0.56
CLK4-201ENST00000316308 C18orf32Q8TCD1 76 aa11.56□□□□□ -0.56
CLK4-201ENST00000316308 PRSS22Q9GZN4 317 aa11.56□□□□□ -0.56
CLK4-201ENST00000316308 PRORYQ9H606 182 aa11.56□□□□□ -0.56
CLK4-201ENST00000316308 USP9YO00507 2555 aaPredicted RBP11.56□□□□□ -0.56
CLK4-201ENST00000316308 TRBV9A0A0B4J1U6 114 aa11.56□□□□□ -0.56
CLK4-201ENST00000316308 TMEM11P17152 192 aa11.56□□□□□ -0.56
CLK4-201ENST00000316308 SSTP61278 116 aa11.56□□□□□ -0.56
CLK4-201ENST00000316308 Q56UQ5 140 aa11.56□□□□□ -0.56
CLK4-201ENST00000316308 WDR73Q6P4I2 378 aa11.56□□□□□ -0.56
CLK4-201ENST00000316308 SOX21Q9Y651 276 aaPredicted RBP11.56□□□□□ -0.56
CLK4-201ENST00000316308 OVOL3O00110 214 aa11.55□□□□□ -0.56
CLK4-201ENST00000316308 FOXA3P55318 350 aaPredicted RBP11.55□□□□□ -0.56
CLK4-201ENST00000316308 LMO4P61968 165 aa11.55□□□□□ -0.56
CLK4-201ENST00000316308 REC114Q7Z4M0 266 aa11.55□□□□□ -0.56
CLK4-201ENST00000316308 Q8N976 141 aa11.55□□□□□ -0.56
CLK4-201ENST00000316308 Q8N9W7 124 aa11.55□□□□□ -0.56
CLK4-201ENST00000316308 ZC2HC1AQ96GY0 325 aa11.55□□□□□ -0.56
CLK4-201ENST00000316308 ZNF414Q96IQ9 312 aa11.55□□□□□ -0.56
CLK4-201ENST00000316308 FBN2P35556 2912 aa11.55□□□□□ -0.56
CLK4-201ENST00000316308 HLA-DQA1P01909 254 aa11.55□□□□□ -0.56
CLK4-201ENST00000316308 HLA-DRB1P01911 266 aa11.55□□□□□ -0.56
CLK4-201ENST00000316308 SAA4P35542 130 aa11.55□□□□□ -0.56
CLK4-201ENST00000316308 AMTP48728 403 aa11.55□□□□□ -0.56
CLK4-201ENST00000316308 KRTDAPP60985 99 aa11.55□□□□□ -0.56
CLK4-201ENST00000316308 RPP21Q9H633 154 aaKnown RBP11.55□□□□□ -0.56
CLK4-201ENST00000316308 G3V318 75 aa11.54□□□□□ -0.56
CLK4-201ENST00000316308 EREGO14944 169 aa11.54□□□□□ -0.56
CLK4-201ENST00000316308 MT-ND6P03923 174 aa11.54□□□□□ -0.56
CLK4-201ENST00000316308 NTF3P20783 257 aa11.54□□□□□ -0.56
CLK4-201ENST00000316308 HLA-DMBP28068 263 aa11.54□□□□□ -0.56
CLK4-201ENST00000316308 CRIP1P50238 77 aa11.54□□□□□ -0.56
CLK4-201ENST00000316308 NIT1Q86X76 327 aa11.54□□□□□ -0.56
CLK4-201ENST00000316308 FMC1Q96HJ9 113 aa11.54□□□□□ -0.56
CLK4-201ENST00000316308 C8orf49Q96NF6 230 aa11.54□□□□□ -0.56
CLK4-201ENST00000316308 NRN1Q9NPD7 142 aa11.54□□□□□ -0.56
CLK4-201ENST00000316308 OTORQ9NRC9 128 aa11.54□□□□□ -0.56
CLK4-201ENST00000316308 DOPEY1Q5JWR5 2465 aa11.54□□□□□ -0.56
CLK4-201ENST00000316308 WI2-2373I1.2A0A1W2PRP0 233 aa11.54□□□□□ -0.56
CLK4-201ENST00000316308 P01737 135 aa11.54□□□□□ -0.56
CLK4-201ENST00000316308 BRS3P32247 399 aa11.54□□□□□ -0.56
CLK4-201ENST00000316308 PMCHL1Q16048 86 aa11.54□□□□□ -0.56
CLK4-201ENST00000316308 ECSCRQ19T08 205 aa11.54□□□□□ -0.56
CLK4-201ENST00000316308 TMEM14CQ9P0S9 112 aa11.54□□□□□ -0.56
CLK4-201ENST00000316308 PAM16Q9Y3D7 125 aa11.54□□□□□ -0.56
CLK4-201ENST00000316308 A0A1B0GXF2 115 aa11.53□□□□□ -0.56
CLK4-201ENST00000316308 CTSGP08311 255 aa11.53□□□□□ -0.56
CLK4-201ENST00000316308 BPIFA4PQ86YQ2 179 aa11.53□□□□□ -0.56
CLK4-201ENST00000316308 URB1-AS1Q96HZ7 61 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms