RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 SAA2P0DJI9 122 aaPredicted RBP2.8□□□□□ -1.96
SMCO3-201ENST00000316048 COL8A2P25067 703 aa2.8□□□□□ -1.96
SMCO3-201ENST00000316048 IL3RAP26951 378 aa2.8□□□□□ -1.96
SMCO3-201ENST00000316048 MAS1LP35410 378 aa2.8□□□□□ -1.96
SMCO3-201ENST00000316048 GNB2P62879 340 aa2.8□□□□□ -1.96
SMCO3-201ENST00000316048 DEFA5Q01523 94 aa2.8□□□□□ -1.96
SMCO3-201ENST00000316048 TMEM267Q0VDI3 215 aaPredicted RBP2.8□□□□□ -1.96
SMCO3-201ENST00000316048 LRRC75BQ2VPJ9 315 aa2.8□□□□□ -1.96
SMCO3-201ENST00000316048 LYPD2Q6UXB3 125 aa2.8□□□□□ -1.96
SMCO3-201ENST00000316048 TMEM14EPQ6UXP3 125 aa2.8□□□□□ -1.96
SMCO3-201ENST00000316048 SVBPQ8N300 66 aa2.8□□□□□ -1.96
SMCO3-201ENST00000316048 C8orf31Q8N9H6 132 aa2.8□□□□□ -1.96
SMCO3-201ENST00000316048 ZNF439Q8NDP4 499 aa2.8□□□□□ -1.96
SMCO3-201ENST00000316048 LYPD6BQ8NI32 183 aa2.8□□□□□ -1.96
SMCO3-201ENST00000316048 FAM213BQ8TBF2 198 aa2.8□□□□□ -1.96
SMCO3-201ENST00000316048 LEAP2Q969E1 77 aa2.8□□□□□ -1.96
SMCO3-201ENST00000316048 RASL11BQ9BPW5 248 aa2.8□□□□□ -1.96
SMCO3-201ENST00000316048 PSMG3Q9BT73 122 aaPredicted RBP2.8□□□□□ -1.96
SMCO3-201ENST00000316048 EIF5A2Q9GZV4 153 aaKnown RBP2.8□□□□□ -1.96
SMCO3-201ENST00000316048 SMDT1Q9H4I9 107 aa2.8□□□□□ -1.96
SMCO3-201ENST00000316048 ENY2Q9NPA8 101 aa2.8□□□□□ -1.96
SMCO3-201ENST00000316048 CBLN4Q9NTU7 201 aa2.8□□□□□ -1.96
SMCO3-201ENST00000316048 UQCC1Q9NVA1 299 aa2.8□□□□□ -1.96
SMCO3-201ENST00000316048 FKBP11Q9NYL4 201 aa2.8□□□□□ -1.96
SMCO3-201ENST00000316048 TSSC4Q9Y5U2 329 aaPredicted RBP2.8□□□□□ -1.96
SMCO3-201ENST00000316048 ZGRF1Q86YA3 2104 aa2.79□□□□□ -1.96
SMCO3-201ENST00000316048 C17orf112F2Z3M2 114 aa2.79□□□□□ -1.96
SMCO3-201ENST00000316048 SLC31A2O15432 143 aa2.79□□□□□ -1.96
SMCO3-201ENST00000316048 NUPL2O15504 423 aaKnown RBP2.79□□□□□ -1.96
SMCO3-201ENST00000316048 EIF3GO75821 320 aaKnown RBP eCLIP2.79□□□□□ -1.96
SMCO3-201ENST00000316048 IFNA10P01566 189 aa2.79□□□□□ -1.96
SMCO3-201ENST00000316048 APOA2P02652 100 aa2.79□□□□□ -1.96
SMCO3-201ENST00000316048 SNCAP37840 140 aa2.79□□□□□ -1.96
SMCO3-201ENST00000316048 HSPE1P61604 102 aaKnown RBP2.79□□□□□ -1.96
SMCO3-201ENST00000316048 AKR1C1Q04828 323 aa2.79□□□□□ -1.96
SMCO3-201ENST00000316048 SLC38A11Q08AI6 406 aa2.79□□□□□ -1.96
SMCO3-201ENST00000316048 DAZ2Q13117 558 aaKnown RBP2.79□□□□□ -1.96
SMCO3-201ENST00000316048 GUK1Q16774 197 aa2.79□□□□□ -1.96
SMCO3-201ENST00000316048 SSX9Q7RTT3 188 aa2.79□□□□□ -1.96
SMCO3-201ENST00000316048 TCF23Q7RTU1 214 aa2.79□□□□□ -1.96
SMCO3-201ENST00000316048 ZNF429Q86V71 674 aa2.79□□□□□ -1.96
SMCO3-201ENST00000316048 LINC00311Q8N616 119 aa2.79□□□□□ -1.96
SMCO3-201ENST00000316048 ZNF709Q8N972 641 aa2.79□□□□□ -1.96
SMCO3-201ENST00000316048 OR10X1Q8NGY0 326 aa2.79□□□□□ -1.96
SMCO3-201ENST00000316048 FLYWCH2Q96CP2 140 aaKnown RBP2.79□□□□□ -1.96
SMCO3-201ENST00000316048 RBMXL1Q96E39 390 aaKnown RBP2.79□□□□□ -1.96
SMCO3-201ENST00000316048 OR4C12Q96R67 309 aa2.79□□□□□ -1.96
SMCO3-201ENST00000316048 ZNF251Q9BRH9 671 aa2.79□□□□□ -1.96
SMCO3-201ENST00000316048 SEC11CQ9BY50 192 aa2.79□□□□□ -1.96
SMCO3-201ENST00000316048 SH3BGRL3Q9H299 93 aa2.79□□□□□ -1.96
SMCO3-201ENST00000316048 DAZ3Q9NR90 486 aaKnown RBP2.79□□□□□ -1.96
SMCO3-201ENST00000316048 PRNDQ9UKY0 176 aa2.79□□□□□ -1.96
SMCO3-201ENST00000316048 TIMM9Q9Y5J7 89 aa2.79□□□□□ -1.96
SMCO3-201ENST00000316048 KIAA2026Q5HYC2 2103 aa2.79□□□□□ -1.96
SMCO3-201ENST00000316048 TRBV9A0A0B4J1U6 114 aa2.78□□□□□ -1.96
SMCO3-201ENST00000316048 A0A1B0GW64 132 aa2.78□□□□□ -1.96
SMCO3-201ENST00000316048 H7C2Y5 167 aa2.78□□□□□ -1.96
SMCO3-201ENST00000316048 LY6G6DO95868 133 aa2.78□□□□□ -1.96
SMCO3-201ENST00000316048 CD5P06127 495 aa2.78□□□□□ -1.96
SMCO3-201ENST00000316048 CT45A6P0DMU7 189 aa2.78□□□□□ -1.96
SMCO3-201ENST00000316048 CT45A5P0DMU8 189 aa2.78□□□□□ -1.96
SMCO3-201ENST00000316048 CT45A7P0DMV0 189 aa2.78□□□□□ -1.96
SMCO3-201ENST00000316048 IGHV1-8P0DP01 117 aa2.78□□□□□ -1.96
SMCO3-201ENST00000316048 CCL3L1P16619 93 aa2.78□□□□□ -1.96
SMCO3-201ENST00000316048 LOXP28300 417 aaPredicted RBP2.78□□□□□ -1.96
SMCO3-201ENST00000316048 CTRLP40313 264 aa2.78□□□□□ -1.96
SMCO3-201ENST00000316048 CEBPGP53567 150 aa2.78□□□□□ -1.96
SMCO3-201ENST00000316048 OR2B8PP59922 312 aa2.78□□□□□ -1.96
SMCO3-201ENST00000316048 TFF3Q07654 80 aa2.78□□□□□ -1.96
SMCO3-201ENST00000316048 BTN1A1Q13410 526 aa2.78□□□□□ -1.96
SMCO3-201ENST00000316048 POU2AF1Q16633 256 aa2.78□□□□□ -1.96
SMCO3-201ENST00000316048 TMEM249Q2WGJ8 235 aa2.78□□□□□ -1.96
SMCO3-201ENST00000316048 TMEM155Q4W5P6 130 aa2.78□□□□□ -1.96
SMCO3-201ENST00000316048 C10orf91Q5T1B1 145 aa2.78□□□□□ -1.96
SMCO3-201ENST00000316048 CASC10Q5T4H9 136 aa2.78□□□□□ -1.96
SMCO3-201ENST00000316048 ZNF833PQ6ZTB9 187 aa2.78□□□□□ -1.96
SMCO3-201ENST00000316048 VKORC1L1Q8N0U8 176 aa2.78□□□□□ -1.96
SMCO3-201ENST00000316048 OR8B3Q8NGG8 313 aa2.78□□□□□ -1.96
SMCO3-201ENST00000316048 OR13D1Q8NGV5 346 aa2.78□□□□□ -1.96
SMCO3-201ENST00000316048 VSTM2AQ8TAG5 236 aa2.78□□□□□ -1.96
SMCO3-201ENST00000316048 SFT2D1Q8WV19 159 aa2.78□□□□□ -1.96
SMCO3-201ENST00000316048 OR8B2Q96RD0 313 aa2.78□□□□□ -1.96
SMCO3-201ENST00000316048 TMEM147Q9BVK8 224 aa2.78□□□□□ -1.96
SMCO3-201ENST00000316048 GGACTQ9BVM4 153 aa2.78□□□□□ -1.96
SMCO3-201ENST00000316048 WDR61Q9GZS3 305 aaKnown RBP2.78□□□□□ -1.96
SMCO3-201ENST00000316048 ZNF257Q9Y2Q1 563 aa2.78□□□□□ -1.96
SMCO3-201ENST00000316048 F11RQ9Y624 299 aaKnown RBP2.78□□□□□ -1.96
SMCO3-201ENST00000316048 AKAP13Q12802 2813 aa2.78□□□□□ -1.96
SMCO3-201ENST00000316048 TRAV1-1A0A0B4J248 108 aa2.78□□□□□ -1.96
SMCO3-201ENST00000316048 RBFOX3A6NFN3 312 aa2.78□□□□□ -1.96
SMCO3-201ENST00000316048 LYNX1G3V0Z9 82 aa2.78□□□□□ -1.96
SMCO3-201ENST00000316048 UPK2O00526 184 aa2.78□□□□□ -1.96
SMCO3-201ENST00000316048 MRPS12O15235 138 aaKnown RBP2.78□□□□□ -1.96
SMCO3-201ENST00000316048 CYB5BO43169 146 aa2.78□□□□□ -1.96
SMCO3-201ENST00000316048 MPDU1O75352 247 aa2.78□□□□□ -1.96
SMCO3-201ENST00000316048 SCO1O75880 301 aa2.78□□□□□ -1.96
SMCO3-201ENST00000316048 RBP4P02753 201 aa2.78□□□□□ -1.96
SMCO3-201ENST00000316048 IFNA4P05014 189 aa2.78□□□□□ -1.96
SMCO3-201ENST00000316048 SFTA3P0C7M3 94 aa2.78□□□□□ -1.96
SMCO3-201ENST00000316048 LYNX1P0DP58 116 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms