RNA–Protein interactions for RNA: ENST00000315571.5

LDLRAD3-201, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD3, Length 3,798 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-201ENST00000315571 SPATA46Q5T0L3 261 aa9.49□□□□□ -0.89
LDLRAD3-201ENST00000315571 GTSCR1Q86UQ5 136 aa9.49□□□□□ -0.89
LDLRAD3-201ENST00000315571 GCSAMQ8N6F7 178 aa9.49□□□□□ -0.89
LDLRAD3-201ENST00000315571 ZNF645Q8N7E2 425 aa9.49□□□□□ -0.89
LDLRAD3-201ENST00000315571 ZNF502Q8TBZ5 544 aa9.49□□□□□ -0.89
LDLRAD3-201ENST00000315571 GTSF1Q8WW33 167 aa9.49□□□□□ -0.89
LDLRAD3-201ENST00000315571 RAX2Q96IS3 184 aa9.49□□□□□ -0.89
LDLRAD3-201ENST00000315571 TMEM160Q9NX00 188 aa9.49□□□□□ -0.89
LDLRAD3-201ENST00000315571 C17orf98A8MV24 154 aa9.49□□□□□ -0.89
LDLRAD3-201ENST00000315571 AREGP15514 252 aa9.49□□□□□ -0.89
LDLRAD3-201ENST00000315571 C5orf47Q569G3 176 aa9.49□□□□□ -0.89
LDLRAD3-201ENST00000315571 Q6ZR03 302 aa9.49□□□□□ -0.89
LDLRAD3-201ENST00000315571 CNEP1R1Q8N9A8 125 aa9.49□□□□□ -0.89
LDLRAD3-201ENST00000315571 USP24Q9UPU5 2620 aa9.49□□□□□ -0.89
LDLRAD3-201ENST00000315571 ATMQ13315 3056 aa9.49□□□□□ -0.89
LDLRAD3-201ENST00000315571 BOD1L1Q8NFC6 3051 aa9.49□□□□□ -0.89
LDLRAD3-201ENST00000315571 RP1L1Q8IWN7 2480 aaPredicted RBP9.48□□□□□ -0.89
LDLRAD3-201ENST00000315571 FNDC10F2Z333 226 aa9.48□□□□□ -0.89
LDLRAD3-201ENST00000315571 ZBTB34Q8NCN2 500 aa9.48□□□□□ -0.89
LDLRAD3-201ENST00000315571 DOCK7Q96N67 2140 aa9.48□□□□□ -0.89
LDLRAD3-201ENST00000315571 C12orf49Q9H741 205 aa9.48□□□□□ -0.89
LDLRAD3-201ENST00000315571 DSCAML1Q8TD84 2053 aa9.48□□□□□ -0.89
LDLRAD3-201ENST00000315571 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.48□□□□□ -0.89
LDLRAD3-201ENST00000315571 COX7A2P2O60397 106 aa9.48□□□□□ -0.89
LDLRAD3-201ENST00000315571 BRI3O95415 125 aa9.48□□□□□ -0.89
LDLRAD3-201ENST00000315571 SCGB1D4Q6XE38 83 aa9.48□□□□□ -0.89
LDLRAD3-201ENST00000315571 C9orf106Q8NAJ2 232 aa9.48□□□□□ -0.89
LDLRAD3-201ENST00000315571 OR1L8Q8NGR8 309 aa9.48□□□□□ -0.89
LDLRAD3-201ENST00000315571 ZNF747Q9BV97 191 aa9.48□□□□□ -0.89
LDLRAD3-201ENST00000315571 B9A039 149 aa9.48□□□□□ -0.89
LDLRAD3-201ENST00000315571 NPIPB6E9PJ23 425 aa9.48□□□□□ -0.89
LDLRAD3-201ENST00000315571 FGF12P61328 243 aa9.48□□□□□ -0.89
LDLRAD3-201ENST00000315571 GNG5P63218 68 aa9.48□□□□□ -0.89
LDLRAD3-201ENST00000315571 C20orf204Q6ZNR8 217 aa9.48□□□□□ -0.89
LDLRAD3-201ENST00000315571 C10orf126Q8N4M7 172 aa9.48□□□□□ -0.89
LDLRAD3-201ENST00000315571 HS3ST6Q96QI5 342 aa9.48□□□□□ -0.89
LDLRAD3-201ENST00000315571 GNG12Q9UBI6 72 aa9.48□□□□□ -0.89
LDLRAD3-201ENST00000315571 TANC2Q9HCD6 1990 aa9.48□□□□□ -0.89
LDLRAD3-201ENST00000315571 TRGV8A0A0C4DH27 118 aa9.47□□□□□ -0.89
LDLRAD3-201ENST00000315571 CRXO43186 299 aaPredicted RBP9.47□□□□□ -0.89
LDLRAD3-201ENST00000315571 LINC00205P59089 165 aa9.47□□□□□ -0.89
LDLRAD3-201ENST00000315571 ZGRF1Q86YA3 2104 aa9.47□□□□□ -0.89
LDLRAD3-201ENST00000315571 PPDPFLQ8WWR9 84 aa9.47□□□□□ -0.89
LDLRAD3-201ENST00000315571 DLX4Q92988 240 aaPredicted RBP9.47□□□□□ -0.89
LDLRAD3-201ENST00000315571 TMEM54Q969K7 222 aa9.47□□□□□ -0.89
LDLRAD3-201ENST00000315571 A8MWV9 139 aa9.47□□□□□ -0.89
LDLRAD3-201ENST00000315571 H3BTX0 84 aa9.47□□□□□ -0.89
LDLRAD3-201ENST00000315571 RPL30P62888 115 aaKnown RBP9.47□□□□□ -0.89
LDLRAD3-201ENST00000315571 IFI27L1Q96BM0 104 aa9.47□□□□□ -0.89
LDLRAD3-201ENST00000315571 PIMREGQ9BSJ6 248 aa9.47□□□□□ -0.89
LDLRAD3-201ENST00000315571 SIGLEC8Q9NYZ4 499 aa9.47□□□□□ -0.89
LDLRAD3-201ENST00000315571 EPG5Q9HCE0 2579 aa9.47□□□□□ -0.89
LDLRAD3-201ENST00000315571 LYRM7Q5U5X0 104 aa9.47□□□□□ -0.89
LDLRAD3-201ENST00000315571 Q6AWC8 147 aa9.47□□□□□ -0.89
LDLRAD3-201ENST00000315571 Q6ZPA2 131 aa9.47□□□□□ -0.89
LDLRAD3-201ENST00000315571 FAM214BQ7L5A3 538 aa9.47□□□□□ -0.89
LDLRAD3-201ENST00000315571 ITPR1Q14643 2758 aa9.47□□□□□ -0.89
LDLRAD3-201ENST00000315571 C15orf62A8K5M9 175 aa9.46□□□□□ -0.89
LDLRAD3-201ENST00000315571 H7C2G1 150 aa9.46□□□□□ -0.89
LDLRAD3-201ENST00000315571 SS18L1O75177 396 aaPredicted RBP9.46□□□□□ -0.89
LDLRAD3-201ENST00000315571 LTAP01374 205 aa9.46□□□□□ -0.89
LDLRAD3-201ENST00000315571 NDUFV3P56181 108 aaKnown RBP9.46□□□□□ -0.89
LDLRAD3-201ENST00000315571 FBXL15Q9H469 300 aa9.46□□□□□ -0.89
LDLRAD3-201ENST00000315571 FAM215AQ9Y5M1 114 aa9.46□□□□□ -0.89
LDLRAD3-201ENST00000315571 TCRBV4S1A1TA0A5B7 111 aa9.46□□□□□ -0.89
LDLRAD3-201ENST00000315571 HOXA3O43365 443 aaPredicted RBP9.46□□□□□ -0.89
LDLRAD3-201ENST00000315571 C11orf52Q96A22 123 aa9.46□□□□□ -0.89
LDLRAD3-201ENST00000315571 RPP21Q9H633 154 aaKnown RBP9.46□□□□□ -0.89
LDLRAD3-201ENST00000315571 KLF12Q9Y4X4 402 aa9.46□□□□□ -0.89
LDLRAD3-201ENST00000315571 MBD3L4A6NDZ8 208 aaPredicted RBP9.46□□□□□ -0.9
LDLRAD3-201ENST00000315571 MBD3L3A6NE82 208 aaPredicted RBP9.46□□□□□ -0.9
LDLRAD3-201ENST00000315571 MBD3L5A6NJ08 208 aaPredicted RBP9.46□□□□□ -0.9
LDLRAD3-201ENST00000315571 SPINT2O43291 252 aa9.46□□□□□ -0.9
LDLRAD3-201ENST00000315571 RIGQ13278 110 aa9.46□□□□□ -0.9
LDLRAD3-201ENST00000315571 PPP1R27Q86WC6 154 aa9.46□□□□□ -0.9
LDLRAD3-201ENST00000315571 MBD3L2Q8NHZ7 208 aaPredicted RBP9.46□□□□□ -0.9
LDLRAD3-201ENST00000315571 A4D1N5 150 aa9.45□□□□□ -0.9
LDLRAD3-201ENST00000315571 VWC2LB2RUY7 222 aa9.45□□□□□ -0.9
LDLRAD3-201ENST00000315571 GGTLC3B5MD39 225 aa9.45□□□□□ -0.9
LDLRAD3-201ENST00000315571 FCN3O75636 299 aa9.45□□□□□ -0.9
LDLRAD3-201ENST00000315571 NGFP01138 241 aa9.45□□□□□ -0.9
LDLRAD3-201ENST00000315571 PRB4P10163 310 aaPredicted RBP9.45□□□□□ -0.9
LDLRAD3-201ENST00000315571 IFI27P40305 119 aaPredicted RBP9.45□□□□□ -0.9
LDLRAD3-201ENST00000315571 ZNF146Q15072 292 aa9.45□□□□□ -0.9
LDLRAD3-201ENST00000315571 C12orf74Q32Q52 190 aa9.45□□□□□ -0.9
LDLRAD3-201ENST00000315571 ATP5L2Q7Z4Y8 100 aa9.45□□□□□ -0.9
LDLRAD3-201ENST00000315571 RPRMLQ8N4K4 120 aa9.45□□□□□ -0.9
LDLRAD3-201ENST00000315571 ARFGEF3Q5TH69 2177 aa9.45□□□□□ -0.9
LDLRAD3-201ENST00000315571 PGPA6NDG6 321 aa9.45□□□□□ -0.9
LDLRAD3-201ENST00000315571 OR2J3O76001 311 aa9.45□□□□□ -0.9
LDLRAD3-201ENST00000315571 C8orf88P0DMB2 117 aa9.45□□□□□ -0.9
LDLRAD3-201ENST00000315571 RBPMS2Q6ZRY4 209 aaKnown RBP9.45□□□□□ -0.9
LDLRAD3-201ENST00000315571 VPREB3Q9UKI3 123 aa9.45□□□□□ -0.9
LDLRAD3-201ENST00000315571 PEX7O00628 323 aa9.45□□□□□ -0.9
LDLRAD3-201ENST00000315571 RPEQ96AT9 228 aa9.45□□□□□ -0.9
LDLRAD3-201ENST00000315571 ZNF837Q96EG3 531 aaPredicted RBP9.45□□□□□ -0.9
LDLRAD3-201ENST00000315571 PAXXQ9BUH6 204 aa9.45□□□□□ -0.9
LDLRAD3-201ENST00000315571 ZNF688P0C7X2 276 aa9.44□□□□□ -0.9
LDLRAD3-201ENST00000315571 CRIP3Q6Q6R5 217 aa9.44□□□□□ -0.9
LDLRAD3-201ENST00000315571 SRSF12Q8WXF0 261 aaKnown RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms