RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 ZNF207O43670 478 aaKnown RBP17.32■□□□□ 0.36
IRF3-201ENST00000309877 NDUFA7O95182 113 aa17.32■□□□□ 0.36
IRF3-201ENST00000309877 HIST1H1EP10412 219 aaKnown RBP17.32■□□□□ 0.36
IRF3-201ENST00000309877 CARHSP1Q9Y2V2 147 aaKnown RBP17.32■□□□□ 0.36
IRF3-201ENST00000309877 ZNF320A2RRD8 509 aa17.31■□□□□ 0.36
IRF3-201ENST00000309877 CYSRT1A8MQ03 144 aa17.31■□□□□ 0.36
IRF3-201ENST00000309877 F6UZH7 168 aa17.31■□□□□ 0.36
IRF3-201ENST00000309877 TMEM250H0YL14 139 aa17.31■□□□□ 0.36
IRF3-201ENST00000309877 FAM106AQ4KMX7 169 aa17.31■□□□□ 0.36
IRF3-201ENST00000309877 KHDC1LQ5JSQ8 128 aa17.31■□□□□ 0.36
IRF3-201ENST00000309877 OR8I2Q8N0Y5 310 aa17.31■□□□□ 0.36
IRF3-201ENST00000309877 RPL7P18124 248 aaKnown RBP17.3■□□□□ 0.36
IRF3-201ENST00000309877 RPEL1Q2QD12 228 aa17.3■□□□□ 0.36
IRF3-201ENST00000309877 UNQ9165/PRO28630Q6UXU0 137 aa17.3■□□□□ 0.36
IRF3-201ENST00000309877 NKX6-2Q9C056 277 aaPredicted RBP17.3■□□□□ 0.36
IRF3-201ENST00000309877 CRYBB3P26998 211 aa17.29■□□□□ 0.36
IRF3-201ENST00000309877 CDX1P47902 265 aaPredicted RBP17.29■□□□□ 0.36
IRF3-201ENST00000309877 TCTEX1D4Q5JR98 221 aa17.29■□□□□ 0.36
IRF3-201ENST00000309877 RANP62826 216 aaKnown RBP17.29■□□□□ 0.36
IRF3-201ENST00000309877 SUMO1P63165 101 aaKnown RBP17.29■□□□□ 0.36
IRF3-201ENST00000309877 GPHB5Q86YW7 130 aa17.29■□□□□ 0.36
IRF3-201ENST00000309877 TMEM190Q8WZ59 177 aa17.29■□□□□ 0.36
IRF3-201ENST00000309877 ZNF586Q9NXT0 402 aa17.29■□□□□ 0.36
IRF3-201ENST00000309877 H3BQ15 152 aa17.28■□□□□ 0.36
IRF3-201ENST00000309877 H3BTX0 84 aa17.28■□□□□ 0.36
IRF3-201ENST00000309877 MRPS12O15235 138 aaKnown RBP17.28■□□□□ 0.36
IRF3-201ENST00000309877 BUB3O43684 328 aa17.28■□□□□ 0.36
IRF3-201ENST00000309877 FAM90A2PQ658T7 463 aa17.28■□□□□ 0.36
IRF3-201ENST00000309877 WIPF2Q8TF74 440 aaPredicted RBP17.28■□□□□ 0.36
IRF3-201ENST00000309877 IGHV3-66A0A0C4DH42 116 aa17.27■□□□□ 0.36
IRF3-201ENST00000309877 GGTLC3B5MD39 225 aa17.27■□□□□ 0.36
IRF3-201ENST00000309877 HAX1O00165 279 aa17.27■□□□□ 0.36
IRF3-201ENST00000309877 GUCA2BQ16661 112 aa17.27■□□□□ 0.36
IRF3-201ENST00000309877 C1orf194Q5T5A4 169 aa17.27■□□□□ 0.36
IRF3-201ENST00000309877 SVBPQ8N300 66 aa17.27■□□□□ 0.36
IRF3-201ENST00000309877 RPUSD4Q96CM3 377 aaKnown RBP17.27■□□□□ 0.36
IRF3-201ENST00000309877 U3KQE9 123 aa17.27■□□□□ 0.36
IRF3-201ENST00000309877 IGHV3OR16-13A0A075B7E8 117 aa17.26■□□□□ 0.35
IRF3-201ENST00000309877 IGHV3-49A0A0A0MS15 119 aa17.26■□□□□ 0.35
IRF3-201ENST00000309877 IGHV3-74A0A0B4J1X5 117 aa17.26■□□□□ 0.35
IRF3-201ENST00000309877 APOHP02749 345 aaPredicted RBP17.26■□□□□ 0.35
IRF3-201ENST00000309877 IGLC2P0DOY2 106 aa17.26■□□□□ 0.35
IRF3-201ENST00000309877 ZNF674Q2M3X9 581 aa17.26■□□□□ 0.35
IRF3-201ENST00000309877 CCDC28AQ8IWP9 274 aa17.26■□□□□ 0.35
IRF3-201ENST00000309877 C4orf3Q8WVX3 66 aa17.26■□□□□ 0.35
IRF3-201ENST00000309877 GPR82Q96P67 336 aa17.26■□□□□ 0.35
IRF3-201ENST00000309877 RNF114Q9Y508 228 aa17.26■□□□□ 0.35
IRF3-201ENST00000309877 TRBV19A0A075B6N1 114 aa17.26■□□□□ 0.35
IRF3-201ENST00000309877 IGHV4OR15-8A0A075B7B6 117 aa17.26■□□□□ 0.35
IRF3-201ENST00000309877 A0A087WW49 117 aa17.26■□□□□ 0.35
IRF3-201ENST00000309877 SCO2A0A1W2PP80 73 aa17.26■□□□□ 0.35
IRF3-201ENST00000309877 ATF4P18848 351 aaPredicted RBP17.26■□□□□ 0.35
IRF3-201ENST00000309877 C18orf65Q6ZTR6 163 aa17.26■□□□□ 0.35
IRF3-201ENST00000309877 ZNF727A8MUV8 499 aa17.25■□□□□ 0.35
IRF3-201ENST00000309877 NDUFB4O95168 129 aa17.25■□□□□ 0.35
IRF3-201ENST00000309877 SRSF2Q01130 221 aaKnown RBP17.25■□□□□ 0.35
IRF3-201ENST00000309877 NIPSNAP3BQ9BS92 247 aa17.25■□□□□ 0.35
IRF3-201ENST00000309877 UFC1Q9Y3C8 167 aa17.25■□□□□ 0.35
IRF3-201ENST00000309877 A0A1W2PS18 150 aa17.24■□□□□ 0.35
IRF3-201ENST00000309877 PGPA6NDG6 321 aa17.24■□□□□ 0.35
IRF3-201ENST00000309877 GALR1P47211 349 aa17.24■□□□□ 0.35
IRF3-201ENST00000309877 C11orf44Q8N8P7 122 aa17.24■□□□□ 0.35
IRF3-201ENST00000309877 KLHL30-AS1Q8NEE0 82 aa17.24■□□□□ 0.35
IRF3-201ENST00000309877 WFDC12Q8WWY7 111 aa17.24■□□□□ 0.35
IRF3-201ENST00000309877 C17orf77Q96MU5 243 aa17.24■□□□□ 0.35
IRF3-201ENST00000309877 SMIM7Q9BQ49 75 aa17.24■□□□□ 0.35
IRF3-201ENST00000309877 ELOVL1Q9BW60 279 aa17.24■□□□□ 0.35
IRF3-201ENST00000309877 PARLQ9H300 379 aa17.24■□□□□ 0.35
IRF3-201ENST00000309877 Q9H3A6 140 aa17.24■□□□□ 0.35
IRF3-201ENST00000309877 DAZ1Q9NQZ3 744 aaKnown RBP17.24■□□□□ 0.35
IRF3-201ENST00000309877 CUBNO60494 3623 aa17.23■□□□□ 0.35
IRF3-201ENST00000309877 K7EMT4 169 aa17.23■□□□□ 0.35
IRF3-201ENST00000309877 CD28P10747 220 aa17.23■□□□□ 0.35
IRF3-201ENST00000309877 FAM74A3Q4VXF1 159 aa17.23■□□□□ 0.35
IRF3-201ENST00000309877 TM4SF20Q53R12 229 aa17.23■□□□□ 0.35
IRF3-201ENST00000309877 GRAMD2BQ96HH9 432 aa17.23■□□□□ 0.35
IRF3-201ENST00000309877 ZNF785A8K8V0 405 aa17.23■□□□□ 0.35
IRF3-201ENST00000309877 SNAPINO95295 136 aa17.23■□□□□ 0.35
IRF3-201ENST00000309877 HOXD3P31249 432 aaPredicted RBP17.23■□□□□ 0.35
IRF3-201ENST00000309877 DPF1Q92782 380 aa17.23■□□□□ 0.35
IRF3-201ENST00000309877 C11orf52Q96A22 123 aa17.23■□□□□ 0.35
IRF3-201ENST00000309877 OTORQ9NRC9 128 aa17.23■□□□□ 0.35
IRF3-201ENST00000309877 SMAD5-AS1Q9Y6J3 95 aa17.23■□□□□ 0.35
IRF3-201ENST00000309877 FN1P02751 2386 aaKnown RBP17.22■□□□□ 0.35
IRF3-201ENST00000309877 SLC25A5P05141 298 aaKnown RBP17.22■□□□□ 0.35
IRF3-201ENST00000309877 MYCNOSP40205 109 aa17.22■□□□□ 0.35
IRF3-201ENST00000309877 PDE6HQ13956 83 aa17.22■□□□□ 0.35
IRF3-201ENST00000309877 C16orf54Q6UWD8 224 aa17.22■□□□□ 0.35
IRF3-201ENST00000309877 NSD1Q96L73 2696 aaPredicted RBP17.22■□□□□ 0.35
IRF3-201ENST00000309877 IGHV7-4-1A0A0J9YVY3 117 aa17.21■□□□□ 0.35
IRF3-201ENST00000309877 LINC01619G3V211 115 aa17.21■□□□□ 0.35
IRF3-201ENST00000309877 DEFB136Q30KP8 78 aa17.21■□□□□ 0.35
IRF3-201ENST00000309877 LYPD1Q8N2G4 141 aa17.21■□□□□ 0.35
IRF3-201ENST00000309877 OR11H1Q8NG94 326 aa17.21■□□□□ 0.35
IRF3-201ENST00000309877 OR1N2Q8NGR9 330 aa17.21■□□□□ 0.35
IRF3-201ENST00000309877 TCEAL7Q9BRU2 100 aa17.21■□□□□ 0.35
IRF3-201ENST00000309877 M0R036 132 aa17.2■□□□□ 0.34
IRF3-201ENST00000309877 SYNJ2BPP57105 145 aa17.2■□□□□ 0.34
IRF3-201ENST00000309877 PROK1P58294 105 aa17.2■□□□□ 0.34
IRF3-201ENST00000309877 REC114Q7Z4M0 266 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms