RNA–Protein interactions for RNA: ENST00000308354.11

PDLIM2-202, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-202ENST00000308354 IGHV3-35A0A0C4DH35 117 aa17.52■□□□□ 0.4
PDLIM2-202ENST00000308354 A6NDX4 124 aa17.52■□□□□ 0.4
PDLIM2-202ENST00000308354 S100A2P29034 98 aa17.52■□□□□ 0.4
PDLIM2-202ENST00000308354 TAS2R60P59551 318 aa17.52■□□□□ 0.4
PDLIM2-202ENST00000308354 CTAG1AP78358 180 aa17.52■□□□□ 0.4
PDLIM2-202ENST00000308354 ZNF600Q6ZNG1 722 aa17.52■□□□□ 0.4
PDLIM2-202ENST00000308354 ZNF469Q96JG9 3925 aaPredicted RBP17.52■□□□□ 0.39
PDLIM2-202ENST00000308354 PGPA6NDG6 321 aa17.52■□□□□ 0.39
PDLIM2-202ENST00000308354 ISLRO14498 428 aa17.52■□□□□ 0.39
PDLIM2-202ENST00000308354 SLC25A5P05141 298 aaKnown RBP17.52■□□□□ 0.39
PDLIM2-202ENST00000308354 FABP1P07148 127 aa17.52■□□□□ 0.39
PDLIM2-202ENST00000308354 BLCAPP62952 87 aa17.52■□□□□ 0.39
PDLIM2-202ENST00000308354 RPEL1Q2QD12 228 aa17.52■□□□□ 0.39
PDLIM2-202ENST00000308354 KRTAP1-3Q8IUG1 177 aa17.52■□□□□ 0.39
PDLIM2-202ENST00000308354 CHRDL1Q9BU40 450 aa17.52■□□□□ 0.39
PDLIM2-202ENST00000308354 TRAPPC1Q9Y5R8 145 aa17.52■□□□□ 0.39
PDLIM2-202ENST00000308354 PRRC2AP48634 2157 aaKnown RBP17.51■□□□□ 0.39
PDLIM2-202ENST00000308354 TRAV30A0A087WSZ9 112 aa17.51■□□□□ 0.39
PDLIM2-202ENST00000308354 USF2Q15853 346 aaPredicted RBP17.51■□□□□ 0.39
PDLIM2-202ENST00000308354 DEFB112Q30KQ8 113 aa17.51■□□□□ 0.39
PDLIM2-202ENST00000308354 Q6ZS46 218 aa17.51■□□□□ 0.39
PDLIM2-202ENST00000308354 XKRY2A2RUG3 117 aa17.51■□□□□ 0.39
PDLIM2-202ENST00000308354 CTSGP08311 255 aa17.51■□□□□ 0.39
PDLIM2-202ENST00000308354 OSTCQ9NRP0 149 aa17.51■□□□□ 0.39
PDLIM2-202ENST00000308354 EPDR1Q9UM22 224 aa17.51■□□□□ 0.39
PDLIM2-202ENST00000308354 RPH3ALQ9UNE2 315 aa17.51■□□□□ 0.39
PDLIM2-202ENST00000308354 HIST1H1BP16401 226 aaKnown RBP17.5■□□□□ 0.39
PDLIM2-202ENST00000308354 YPEL3P61236 119 aaPredicted RBP17.5■□□□□ 0.39
PDLIM2-202ENST00000308354 IBA57Q5T440 356 aaKnown RBP17.5■□□□□ 0.39
PDLIM2-202ENST00000308354 ZNF48Q96MX3 618 aaPredicted RBP17.5■□□□□ 0.39
PDLIM2-202ENST00000308354 CCDC168Q8NDH2 2452 aa17.5■□□□□ 0.39
PDLIM2-202ENST00000308354 IGHV3OR16-8A0A075B7F1 116 aa17.49■□□□□ 0.39
PDLIM2-202ENST00000308354 TRAV41A0A0B4J266 112 aa17.49■□□□□ 0.39
PDLIM2-202ENST00000308354 GPR183P32249 361 aa17.49■□□□□ 0.39
PDLIM2-202ENST00000308354 ADMP35318 185 aa17.49■□□□□ 0.39
PDLIM2-202ENST00000308354 SGK494Q96LW2 274 aa17.49■□□□□ 0.39
PDLIM2-202ENST00000308354 TRBV9A0A0B4J1U6 114 aa17.49■□□□□ 0.39
PDLIM2-202ENST00000308354 J3QLI3 93 aa17.49■□□□□ 0.39
PDLIM2-202ENST00000308354 FABP4P15090 132 aa17.49■□□□□ 0.39
PDLIM2-202ENST00000308354 BAGE2Q86Y30 109 aa17.49■□□□□ 0.39
PDLIM2-202ENST00000308354 TMEM183AQ8IXX5 376 aa17.49■□□□□ 0.39
PDLIM2-202ENST00000308354 OR8I2Q8N0Y5 310 aa17.49■□□□□ 0.39
PDLIM2-202ENST00000308354 OR10D4PQ8NGN7 298 aa17.49■□□□□ 0.39
PDLIM2-202ENST00000308354 NOL4LQ96MY1 436 aaPredicted RBP17.49■□□□□ 0.39
PDLIM2-202ENST00000308354 Q9H3A6 140 aa17.49■□□□□ 0.39
PDLIM2-202ENST00000308354 TRAV9-1A0A075B6T8 112 aa17.48■□□□□ 0.39
PDLIM2-202ENST00000308354 WI2-2373I1.2A0A1W2PRP0 233 aa17.48■□□□□ 0.39
PDLIM2-202ENST00000308354 IGHV4-59P01825 116 aa17.48■□□□□ 0.39
PDLIM2-202ENST00000308354 FCGR2BP31994 310 aaPredicted RBP17.48■□□□□ 0.39
PDLIM2-202ENST00000308354 S100A12P80511 92 aa17.48■□□□□ 0.39
PDLIM2-202ENST00000308354 NIT2Q9NQR4 276 aa17.48■□□□□ 0.39
PDLIM2-202ENST00000308354 CLEC3BP05452 202 aa17.48■□□□□ 0.39
PDLIM2-202ENST00000308354 ZNF502Q8TBZ5 544 aa17.48■□□□□ 0.39
PDLIM2-202ENST00000308354 ZNF586Q9NXT0 402 aa17.48■□□□□ 0.39
PDLIM2-202ENST00000308354 FRMD6-AS1P0C7T7 363 aa17.47■□□□□ 0.39
PDLIM2-202ENST00000308354 CBLN1P23435 193 aa17.47■□□□□ 0.39
PDLIM2-202ENST00000308354 VN1R17PQ8TDU5 208 aa17.47■□□□□ 0.39
PDLIM2-202ENST00000308354 TMEM68Q96MH6 324 aa17.47■□□□□ 0.39
PDLIM2-202ENST00000308354 SHANK2-AS3Q9BTD1 123 aa17.47■□□□□ 0.39
PDLIM2-202ENST00000308354 SERTAD4Q9NUC0 356 aa17.47■□□□□ 0.39
PDLIM2-202ENST00000308354 TMEM14CQ9P0S9 112 aa17.47■□□□□ 0.39
PDLIM2-202ENST00000308354 MXRA5Q9NR99 2828 aa17.47■□□□□ 0.39
PDLIM2-202ENST00000308354 TMEM183BQ1AE95 376 aa17.47■□□□□ 0.39
PDLIM2-202ENST00000308354 TCL1AP56279 114 aa17.46■□□□□ 0.39
PDLIM2-202ENST00000308354 UBE2G1P62253 170 aa17.46■□□□□ 0.39
PDLIM2-202ENST00000308354 COA6Q5JTJ3 125 aaKnown RBP17.46■□□□□ 0.39
PDLIM2-202ENST00000308354 CLEC19AQ6UXS0 136 aa17.46■□□□□ 0.39
PDLIM2-202ENST00000308354 C5orf17Q8NAS9 161 aa17.46■□□□□ 0.39
PDLIM2-202ENST00000308354 WFDC11Q8NEX6 87 aa17.46■□□□□ 0.39
PDLIM2-202ENST00000308354 CCDC140Q96MF4 163 aa17.46■□□□□ 0.39
PDLIM2-202ENST00000308354 HIST1H2BLQ99880 126 aa17.46■□□□□ 0.39
PDLIM2-202ENST00000308354 ITPR3Q14573 2671 aa17.46■□□□□ 0.39
PDLIM2-202ENST00000308354 H3BRN7 92 aa17.45■□□□□ 0.38
PDLIM2-202ENST00000308354 CA1P00915 261 aaPredicted RBP17.45■□□□□ 0.38
PDLIM2-202ENST00000308354 C19orf54Q5BKX5 351 aa17.45■□□□□ 0.38
PDLIM2-202ENST00000308354 PYY3Q5JQD4 70 aa17.45■□□□□ 0.38
PDLIM2-202ENST00000308354 ATG101Q9BSB4 218 aa17.45■□□□□ 0.38
PDLIM2-202ENST00000308354 ZNF705GA8MUZ8 300 aaPredicted RBP17.45■□□□□ 0.38
PDLIM2-202ENST00000308354 HIST1H1EP10412 219 aaKnown RBP17.45■□□□□ 0.38
PDLIM2-202ENST00000308354 MBD6Q96DN6 1003 aa17.45■□□□□ 0.38
PDLIM2-202ENST00000308354 SPINK4O60575 86 aa17.44■□□□□ 0.38
PDLIM2-202ENST00000308354 CIARTQ8N365 385 aaPredicted RBP17.44■□□□□ 0.38
PDLIM2-202ENST00000308354 C17orf77Q96MU5 243 aa17.44■□□□□ 0.38
PDLIM2-202ENST00000308354 TXN2Q99757 166 aa17.44■□□□□ 0.38
PDLIM2-202ENST00000308354 GNB4Q9HAV0 340 aa17.44■□□□□ 0.38
PDLIM2-202ENST00000308354 KLF12Q9Y4X4 402 aa17.44■□□□□ 0.38
PDLIM2-202ENST00000308354 GCN1Q92616 2671 aaKnown RBP17.44■□□□□ 0.38
PDLIM2-202ENST00000308354 IGHG2P01859 326 aa17.44■□□□□ 0.38
PDLIM2-202ENST00000308354 SLC35B1P78383 322 aa17.44■□□□□ 0.38
PDLIM2-202ENST00000308354 KLK9Q2XQG4 91 aa17.44■□□□□ 0.38
PDLIM2-202ENST00000308354 PRR27Q6MZM9 219 aa17.44■□□□□ 0.38
PDLIM2-202ENST00000308354 KLK9Q9UKQ9 250 aa17.44■□□□□ 0.38
PDLIM2-202ENST00000308354 TLN2Q9Y4G6 2542 aa17.43■□□□□ 0.38
PDLIM2-202ENST00000308354 TCRAP04437 139 aa17.43■□□□□ 0.38
PDLIM2-202ENST00000308354 PRB4P10163 310 aaPredicted RBP17.43■□□□□ 0.38
PDLIM2-202ENST00000308354 IER3P46695 156 aa17.43■□□□□ 0.38
PDLIM2-202ENST00000308354 EXOC3-AS1Q8N2X6 119 aa17.43■□□□□ 0.38
PDLIM2-202ENST00000308354 PACRGQ96M98 296 aaPredicted RBP17.43■□□□□ 0.38
PDLIM2-202ENST00000308354 ITPR2Q14571 2701 aa17.43■□□□□ 0.38
PDLIM2-202ENST00000308354 IGF1P05019 195 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms