RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 RPRMQ9NS64 109 aa19.19■□□□□ 0.66
CDKN2A-201ENST00000304494 XCL2Q9UBD3 114 aa19.19■□□□□ 0.66
CDKN2A-201ENST00000304494 OR5G3P0C626 314 aa19.18■□□□□ 0.66
CDKN2A-201ENST00000304494 PVALBP20472 110 aaPredicted RBP19.18■□□□□ 0.66
CDKN2A-201ENST00000304494 BCAP31P51572 246 aa19.18■□□□□ 0.66
CDKN2A-201ENST00000304494 EBLN2Q6P2I7 272 aa19.18■□□□□ 0.66
CDKN2A-201ENST00000304494 ZNF546Q86UE3 836 aa19.18■□□□□ 0.66
CDKN2A-201ENST00000304494 HRH4Q9H3N8 390 aa19.18■□□□□ 0.66
CDKN2A-201ENST00000304494 RNF24Q9Y225 148 aa19.18■□□□□ 0.66
CDKN2A-201ENST00000304494 X6R8D5 127 aa19.18■□□□□ 0.66
CDKN2A-201ENST00000304494 CAV2P51636 162 aa19.17■□□□□ 0.66
CDKN2A-201ENST00000304494 SLC38A11Q08AI6 406 aa19.17■□□□□ 0.66
CDKN2A-201ENST00000304494 ARL16Q0P5N6 197 aa19.17■□□□□ 0.66
CDKN2A-201ENST00000304494 PXDC1Q5TGL8 231 aa19.17■□□□□ 0.66
CDKN2A-201ENST00000304494 GOSR2O14653 212 aa19.16■□□□□ 0.66
CDKN2A-201ENST00000304494 IGKV3-20P01619 116 aa19.16■□□□□ 0.66
CDKN2A-201ENST00000304494 RBMY1A1P0DJD3 496 aaKnown RBP19.16■□□□□ 0.66
CDKN2A-201ENST00000304494 RBMY1CP0DJD4 496 aa19.16■□□□□ 0.66
CDKN2A-201ENST00000304494 RPL7P18124 248 aaKnown RBP19.16■□□□□ 0.66
CDKN2A-201ENST00000304494 DEFB1P60022 68 aa19.16■□□□□ 0.66
CDKN2A-201ENST00000304494 RBMY1FQ15415 496 aaKnown RBP19.16■□□□□ 0.66
CDKN2A-201ENST00000304494 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa19.16■□□□□ 0.66
CDKN2A-201ENST00000304494 LINC00476Q8WZB0 136 aa19.16■□□□□ 0.66
CDKN2A-201ENST00000304494 ARL6Q9H0F7 186 aa19.16■□□□□ 0.66
CDKN2A-201ENST00000304494 GPN1Q9HCN4 374 aaPredicted RBP19.16■□□□□ 0.66
CDKN2A-201ENST00000304494 OR4B1Q8NGF8 309 aa19.15■□□□□ 0.66
CDKN2A-201ENST00000304494 AGPAT2O15120 278 aa19.14■□□□□ 0.65
CDKN2A-201ENST00000304494 S100A10P60903 97 aa19.14■□□□□ 0.65
CDKN2A-201ENST00000304494 C17orf77Q96MU5 243 aa19.14■□□□□ 0.65
CDKN2A-201ENST00000304494 UHRF2Q96PU4 802 aa19.14■□□□□ 0.65
CDKN2A-201ENST00000304494 A0A0J9YX75 114 aa19.13■□□□□ 0.65
CDKN2A-201ENST00000304494 C20orf173Q96LM9 149 aa19.13■□□□□ 0.65
CDKN2A-201ENST00000304494 ARV1Q9H2C2 271 aa19.13■□□□□ 0.65
CDKN2A-201ENST00000304494 C11orf1Q9H5F2 150 aa19.13■□□□□ 0.65
CDKN2A-201ENST00000304494 PSG9Q00887 426 aa19.12■□□□□ 0.65
CDKN2A-201ENST00000304494 FGL1Q08830 312 aa19.12■□□□□ 0.65
CDKN2A-201ENST00000304494 RAB31Q13636 194 aa19.12■□□□□ 0.65
CDKN2A-201ENST00000304494 FAM78BQ5VT40 261 aa19.12■□□□□ 0.65
CDKN2A-201ENST00000304494 LYRM2Q9NU23 88 aaPredicted RBP19.12■□□□□ 0.65
CDKN2A-201ENST00000304494 FAM24AA6NFZ4 105 aa19.11■□□□□ 0.65
CDKN2A-201ENST00000304494 F6UB75 175 aa19.11■□□□□ 0.65
CDKN2A-201ENST00000304494 CST7O76096 145 aa19.11■□□□□ 0.65
CDKN2A-201ENST00000304494 LY6G6CO95867 125 aa19.11■□□□□ 0.65
CDKN2A-201ENST00000304494 IL15RAQ13261 267 aa19.11■□□□□ 0.65
CDKN2A-201ENST00000304494 RAB32Q13637 225 aa19.11■□□□□ 0.65
CDKN2A-201ENST00000304494 ZNF709Q8N972 641 aa19.11■□□□□ 0.65
CDKN2A-201ENST00000304494 C11orf94C9JXX5 98 aa19.1■□□□□ 0.65
CDKN2A-201ENST00000304494 FXYD7P58549 80 aa19.1■□□□□ 0.65
CDKN2A-201ENST00000304494 PATE2Q6UY27 113 aa19.1■□□□□ 0.65
CDKN2A-201ENST00000304494 ZNF705AQ6ZN79 300 aaPredicted RBP19.1■□□□□ 0.65
CDKN2A-201ENST00000304494 STX12Q86Y82 276 aa19.1■□□□□ 0.65
CDKN2A-201ENST00000304494 NEU1Q99519 415 aa19.1■□□□□ 0.65
CDKN2A-201ENST00000304494 MGST2Q99735 147 aa19.1■□□□□ 0.65
CDKN2A-201ENST00000304494 BATF3Q9NR55 127 aa19.1■□□□□ 0.65
CDKN2A-201ENST00000304494 UQCC1Q9NVA1 299 aa19.1■□□□□ 0.65
CDKN2A-201ENST00000304494 ELOA3CA0A087WX78 387 aaPredicted RBP19.09■□□□□ 0.65
CDKN2A-201ENST00000304494 A0A087X0K7 114 aa19.09■□□□□ 0.65
CDKN2A-201ENST00000304494 PRAF2O60831 178 aa19.09■□□□□ 0.65
CDKN2A-201ENST00000304494 S100A11P31949 105 aa19.09■□□□□ 0.65
CDKN2A-201ENST00000304494 SULT1A1P50225 295 aa19.09■□□□□ 0.65
CDKN2A-201ENST00000304494 HBG1P69891 147 aa19.09■□□□□ 0.65
CDKN2A-201ENST00000304494 HBG2P69892 147 aa19.09■□□□□ 0.65
CDKN2A-201ENST00000304494 IFITM3Q01628 133 aa19.09■□□□□ 0.65
CDKN2A-201ENST00000304494 C2CD4CQ8TF44 421 aa19.09■□□□□ 0.65
CDKN2A-201ENST00000304494 TRAV8-2A0A0B4J237 113 aa19.08■□□□□ 0.64
CDKN2A-201ENST00000304494 SMIM9A6NGZ8 99 aa19.08■□□□□ 0.64
CDKN2A-201ENST00000304494 ZNF705FA8MVS1 300 aaPredicted RBP19.08■□□□□ 0.64
CDKN2A-201ENST00000304494 COX7A2P2O60397 106 aa19.08■□□□□ 0.64
CDKN2A-201ENST00000304494 ZNF705DP0CH99 300 aaPredicted RBP19.08■□□□□ 0.64
CDKN2A-201ENST00000304494 ZNF705BP0CI00 300 aaPredicted RBP19.08■□□□□ 0.64
CDKN2A-201ENST00000304494 CAMLGP49069 296 aa19.08■□□□□ 0.64
CDKN2A-201ENST00000304494 LINC00305Q7Z4B0 112 aa19.08■□□□□ 0.64
CDKN2A-201ENST00000304494 SLC35B3Q9H1N7 401 aa19.08■□□□□ 0.64
CDKN2A-201ENST00000304494 DUSP14O95147 198 aaKnown RBP19.07■□□□□ 0.64
CDKN2A-201ENST00000304494 HLA-DMBP28068 263 aa19.07■□□□□ 0.64
CDKN2A-201ENST00000304494 VWC2Q2TAL6 325 aa19.07■□□□□ 0.64
CDKN2A-201ENST00000304494 NRARPQ7Z6K4 114 aa19.07■□□□□ 0.64
CDKN2A-201ENST00000304494 TMEM252Q8N6L7 170 aa19.07■□□□□ 0.64
CDKN2A-201ENST00000304494 LRRC20Q8TCA0 184 aa19.07■□□□□ 0.64
CDKN2A-201ENST00000304494 WDR83OSQ9Y284 106 aa19.07■□□□□ 0.64
CDKN2A-201ENST00000304494 A8MTW9 85 aa19.06■□□□□ 0.64
CDKN2A-201ENST00000304494 TCTAP57738 103 aa19.06■□□□□ 0.64
CDKN2A-201ENST00000304494 DEFA1P59665 94 aa19.06■□□□□ 0.64
CDKN2A-201ENST00000304494 DEFA3P59666 94 aa19.06■□□□□ 0.64
CDKN2A-201ENST00000304494 IGFL4Q6B9Z1 124 aa19.06■□□□□ 0.64
CDKN2A-201ENST00000304494 Q6ZRG5 221 aa19.06■□□□□ 0.64
CDKN2A-201ENST00000304494 RNF182Q8N6D2 247 aa19.06■□□□□ 0.64
CDKN2A-201ENST00000304494 ZNF738Q8NE65 137 aa19.06■□□□□ 0.64
CDKN2A-201ENST00000304494 GOLT1BQ9Y3E0 138 aa19.06■□□□□ 0.64
CDKN2A-201ENST00000304494 IGHV3OR16-12A0A075B7B8 117 aa19.05■□□□□ 0.64
CDKN2A-201ENST00000304494 IGSF23A1L1A6 192 aa19.05■□□□□ 0.64
CDKN2A-201ENST00000304494 TMEM189A5PLL7 270 aa19.05■□□□□ 0.64
CDKN2A-201ENST00000304494 INMT-MINDY4F8WBC2 141 aa19.05■□□□□ 0.64
CDKN2A-201ENST00000304494 CXCL2P19875 107 aa19.05■□□□□ 0.64
CDKN2A-201ENST00000304494 C10orf113Q5VZT2 155 aa19.05■□□□□ 0.64
CDKN2A-201ENST00000304494 RLN2P04090 185 aa19.04■□□□□ 0.64
CDKN2A-201ENST00000304494 CNN1P51911 297 aaKnown RBP19.04■□□□□ 0.64
CDKN2A-201ENST00000304494 ATP6V1FQ16864 119 aa19.04■□□□□ 0.64
CDKN2A-201ENST00000304494 BPIFA4PQ86YQ2 179 aa19.04■□□□□ 0.64
CDKN2A-201ENST00000304494 TMEM37Q8WXS4 190 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms