RNA–Protein interactions for RNA: ENST00000302787.2

LETM1-201, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LETM1, Length 5,462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-201ENST00000302787 SAMD5Q5TGI4 173 aa17.13■□□□□ 0.33
LETM1-201ENST00000302787 LYPD1Q8N2G4 141 aa17.13■□□□□ 0.33
LETM1-201ENST00000302787 ZNF524Q96C55 264 aa17.13■□□□□ 0.33
LETM1-201ENST00000302787 LINC01549A6NIU2 74 aa17.11■□□□□ 0.33
LETM1-201ENST00000302787 ITGB1BP1O14713 200 aa17.11■□□□□ 0.33
LETM1-201ENST00000302787 GUSBP1Q15486 140 aa17.11■□□□□ 0.33
LETM1-201ENST00000302787 PHF3Q92576 2039 aaKnown RBP17.11■□□□□ 0.33
LETM1-201ENST00000302787 NDPQ00604 133 aa17.11■□□□□ 0.33
LETM1-201ENST00000302787 PAX2Q02962 417 aa17.11■□□□□ 0.33
LETM1-201ENST00000302787 TRBV7-1A0A0A6YYK4 115 aa17.11■□□□□ 0.33
LETM1-201ENST00000302787 HTN3P15516 51 aa17.11■□□□□ 0.33
LETM1-201ENST00000302787 LRRK1Q38SD2 2015 aa17.11■□□□□ 0.33
LETM1-201ENST00000302787 Q6ZS92 163 aa17.1■□□□□ 0.33
LETM1-201ENST00000302787 C9orf139Q6ZV77 190 aa17.1■□□□□ 0.33
LETM1-201ENST00000302787 IGFL4Q6B9Z1 124 aa17.1■□□□□ 0.33
LETM1-201ENST00000302787 IGHV3-64A0A075B6Q5 118 aa17.1■□□□□ 0.33
LETM1-201ENST00000302787 COL8A2P25067 703 aa17.1■□□□□ 0.33
LETM1-201ENST00000302787 LINC00479Q96M42 142 aa17.1■□□□□ 0.33
LETM1-201ENST00000302787 SYS1-DBNDD2H3BUS1 97 aa17.1■□□□□ 0.33
LETM1-201ENST00000302787 PLNP26678 52 aa17.1■□□□□ 0.33
LETM1-201ENST00000302787 ZNF124Q15973 351 aa17.1■□□□□ 0.33
LETM1-201ENST00000302787 Q86TA4 180 aa17.1■□□□□ 0.33
LETM1-201ENST00000302787 ZNF664Q8N3J9 261 aa17.1■□□□□ 0.33
LETM1-201ENST00000302787 PAX9P55771 341 aa17.1■□□□□ 0.33
LETM1-201ENST00000302787 PROK2Q9HC23 129 aa17.09■□□□□ 0.33
LETM1-201ENST00000302787 LMO1P25800 156 aa17.09■□□□□ 0.33
LETM1-201ENST00000302787 TMEM8BA6NDV4 472 aa17.09■□□□□ 0.33
LETM1-201ENST00000302787 DPH3Q96FX2 82 aa17.09■□□□□ 0.33
LETM1-201ENST00000302787 LIME1Q9H400 295 aa17.09■□□□□ 0.33
LETM1-201ENST00000302787 TRAV12-3A0A0B4J271 114 aa17.08■□□□□ 0.33
LETM1-201ENST00000302787 TMEM95Q3KNT9 176 aa17.08■□□□□ 0.33
LETM1-201ENST00000302787 ZNRD1Q9P1U0 126 aa17.08■□□□□ 0.33
LETM1-201ENST00000302787 WDR81Q562E7 1941 aa17.08■□□□□ 0.33
LETM1-201ENST00000302787 NLRC5Q86WI3 1866 aa17.08■□□□□ 0.32
LETM1-201ENST00000302787 A0A1W2PPI3 338 aa17.07■□□□□ 0.32
LETM1-201ENST00000302787 PLXNA4Q9HCM2 1894 aa17.07■□□□□ 0.32
LETM1-201ENST00000302787 SRRM4A7MD48 611 aaKnown RBP17.07■□□□□ 0.32
LETM1-201ENST00000302787 BCL6BQ8N143 479 aaPredicted RBP17.07■□□□□ 0.32
LETM1-201ENST00000302787 NAA38Q9BRA0 125 aaKnown RBP17.07■□□□□ 0.32
LETM1-201ENST00000302787 TRGV4A0A0C4DH28 118 aa17.07■□□□□ 0.32
LETM1-201ENST00000302787 DLEU1O43261 78 aa17.07■□□□□ 0.32
LETM1-201ENST00000302787 BRD3OSQ6XYD6 125 aa17.07■□□□□ 0.32
LETM1-201ENST00000302787 DPH3P1Q9H4G8 78 aa17.07■□□□□ 0.32
LETM1-201ENST00000302787 MALP21145 153 aa17.07■□□□□ 0.32
LETM1-201ENST00000302787 RIPPLY3P57055 190 aa17.07■□□□□ 0.32
LETM1-201ENST00000302787 LINC00477Q96M19 166 aa17.07■□□□□ 0.32
LETM1-201ENST00000302787 A0A087X0K7 114 aa17.06■□□□□ 0.32
LETM1-201ENST00000302787 SHANK2-AS3Q9BTD1 123 aa17.06■□□□□ 0.32
LETM1-201ENST00000302787 TMEM14BQ9NUH8 114 aa17.06■□□□□ 0.32
LETM1-201ENST00000302787 H3BUX3 64 aa17.06■□□□□ 0.32
LETM1-201ENST00000302787 DSCR9P59020 149 aa17.06■□□□□ 0.32
LETM1-201ENST00000302787 GAGE13Q4V321 117 aa17.06■□□□□ 0.32
LETM1-201ENST00000302787 GFRA4Q9GZZ7 299 aa17.06■□□□□ 0.32
LETM1-201ENST00000302787 MPV17L2Q567V2 206 aa17.05■□□□□ 0.32
LETM1-201ENST00000302787 AMN1Q8IY45 258 aa17.05■□□□□ 0.32
LETM1-201ENST00000302787 C11orf44Q8N8P7 122 aa17.05■□□□□ 0.32
LETM1-201ENST00000302787 SRSF8Q9BRL6 282 aaKnown RBP17.05■□□□□ 0.32
LETM1-201ENST00000302787 PFN1P07737 140 aaKnown RBP17.05■□□□□ 0.32
LETM1-201ENST00000302787 SMKR1H3BMG3 65 aa17.05■□□□□ 0.32
LETM1-201ENST00000302787 LY6G6EA0A0G2JKS1 128 aa17.04■□□□□ 0.32
LETM1-201ENST00000302787 ZNF688P0C7X2 276 aa17.04■□□□□ 0.32
LETM1-201ENST00000302787 DEFB104AQ8WTQ1 72 aa17.04■□□□□ 0.32
LETM1-201ENST00000302787 U3KQA8 63 aa17.04■□□□□ 0.32
LETM1-201ENST00000302787 A8MWV9 139 aa17.04■□□□□ 0.32
LETM1-201ENST00000302787 E7EQL1 145 aa17.04■□□□□ 0.32
LETM1-201ENST00000302787 LY6HO94772 140 aa17.04■□□□□ 0.32
LETM1-201ENST00000302787 IGKV1-39P01597 117 aa17.04■□□□□ 0.32
LETM1-201ENST00000302787 IGKV1D-39P04432 117 aa17.04■□□□□ 0.32
LETM1-201ENST00000302787 RCHY1Q96PM5 261 aa17.04■□□□□ 0.32
LETM1-201ENST00000302787 Q0VG73 95 aa17.04■□□□□ 0.32
LETM1-201ENST00000302787 ZNF726P1Q15940 193 aa17.04■□□□□ 0.32
LETM1-201ENST00000302787 TMEM158Q8WZ71 300 aa17.04■□□□□ 0.32
LETM1-201ENST00000302787 ZNF876PQ49A33 203 aa17.03■□□□□ 0.32
LETM1-201ENST00000302787 WDR86Q86TI4 376 aa17.03■□□□□ 0.32
LETM1-201ENST00000302787 A0A0U1RRA0 63 aa17.03■□□□□ 0.32
LETM1-201ENST00000302787 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.03■□□□□ 0.32
LETM1-201ENST00000302787 ERG28Q9UKR5 140 aa17.03■□□□□ 0.32
LETM1-201ENST00000302787 ADARB2-AS1A8MUL3 147 aa17.03■□□□□ 0.32
LETM1-201ENST00000302787 TMEM249Q2WGJ8 235 aa17.03■□□□□ 0.32
LETM1-201ENST00000302787 IGHV3-73A0A0B4J1V6 119 aa17.03■□□□□ 0.32
LETM1-201ENST00000302787 Q6ZR03 302 aa17.03■□□□□ 0.32
LETM1-201ENST00000302787 C14orf178Q8N769 122 aaPredicted RBP17.03■□□□□ 0.32
LETM1-201ENST00000302787 CNOT1A5YKK6 2376 aaKnown RBP17.03■□□□□ 0.32
LETM1-201ENST00000302787 FCN3O75636 299 aa17.02■□□□□ 0.32
LETM1-201ENST00000302787 KIAA2026Q5HYC2 2103 aa17.02■□□□□ 0.32
LETM1-201ENST00000302787 TMEM238C9JI98 176 aa17.02■□□□□ 0.31
LETM1-201ENST00000302787 MRPL52Q86TS9 123 aaKnown RBP17.02■□□□□ 0.31
LETM1-201ENST00000302787 MCRIP2Q9BUT9 160 aaKnown RBP17.02■□□□□ 0.31
LETM1-201ENST00000302787 ZNF503-AS2A6NEH8 195 aa17.02■□□□□ 0.31
LETM1-201ENST00000302787 FAM223BA6NKX1 122 aa17.02■□□□□ 0.31
LETM1-201ENST00000302787 RSPO1Q2MKA7 263 aaPredicted RBP17.02■□□□□ 0.31
LETM1-201ENST00000302787 FAM223AQ8IWN6 122 aa17.02■□□□□ 0.31
LETM1-201ENST00000302787 SIGMAR1Q99720 223 aa17.02■□□□□ 0.31
LETM1-201ENST00000302787 NDUFA4L2Q9NRX3 87 aa17.02■□□□□ 0.31
LETM1-201ENST00000302787 ERCC8Q13216 396 aa17.01■□□□□ 0.31
LETM1-201ENST00000302787 USMG5Q96IX5 58 aa17.01■□□□□ 0.31
LETM1-201ENST00000302787 EP300Q09472 2414 aaPredicted RBP17.01■□□□□ 0.31
LETM1-201ENST00000302787 VCYO14598 125 aa17.01■□□□□ 0.31
LETM1-201ENST00000302787 NDUFS6O75380 124 aaKnown RBP17.01■□□□□ 0.31
LETM1-201ENST00000302787 PDE6HQ13956 83 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 124.4 ms