RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 CR1LQ2VPA4 569 aa11.73□□□□□ -0.53
COL6A2-201ENST00000300527 AMN1Q8IY45 258 aa11.73□□□□□ -0.53
COL6A2-201ENST00000300527 OR4C13Q8NGP0 309 aa11.73□□□□□ -0.53
COL6A2-201ENST00000300527 PRSS22Q9GZN4 317 aa11.73□□□□□ -0.53
COL6A2-201ENST00000300527 GTSF1LQ9H1H1 148 aa11.73□□□□□ -0.53
COL6A2-201ENST00000300527 HIGD1AQ9Y241 93 aa11.73□□□□□ -0.53
COL6A2-201ENST00000300527 C19orf71A6NCJ1 209 aa11.73□□□□□ -0.53
COL6A2-201ENST00000300527 CGB1A6NKQ9 187 aa11.73□□□□□ -0.53
COL6A2-201ENST00000300527 CNTFRP26992 372 aa11.73□□□□□ -0.53
COL6A2-201ENST00000300527 TIMM23BQ5SRD1 257 aa11.73□□□□□ -0.53
COL6A2-201ENST00000300527 OR5AN1Q8NGI8 311 aa11.72□□□□□ -0.53
COL6A2-201ENST00000300527 CCL17Q92583 94 aa11.72□□□□□ -0.53
COL6A2-201ENST00000300527 CACNA1BQ00975 2339 aa11.72□□□□□ -0.53
COL6A2-201ENST00000300527 K7ERJ3 54 aa11.72□□□□□ -0.53
COL6A2-201ENST00000300527 VMA21Q3ZAQ7 101 aa11.72□□□□□ -0.53
COL6A2-201ENST00000300527 Q5PR19 223 aa11.72□□□□□ -0.53
COL6A2-201ENST00000300527 MYCNOSP40205 109 aa11.72□□□□□ -0.53
COL6A2-201ENST00000300527 SMAGPQ0VAQ4 97 aa11.72□□□□□ -0.53
COL6A2-201ENST00000300527 MTURNQ8N3F0 131 aa11.72□□□□□ -0.53
COL6A2-201ENST00000300527 C1RLQ9NZP8 487 aa11.72□□□□□ -0.53
COL6A2-201ENST00000300527 JKAMPQ9P055 326 aa11.72□□□□□ -0.53
COL6A2-201ENST00000300527 SOX21Q9Y651 276 aaPredicted RBP11.72□□□□□ -0.53
COL6A2-201ENST00000300527 IGHV1-46P01743 117 aa11.71□□□□□ -0.53
COL6A2-201ENST00000300527 WT1P19544 449 aaPredicted RBP11.71□□□□□ -0.53
COL6A2-201ENST00000300527 PLGLAQ15195 96 aa11.71□□□□□ -0.53
COL6A2-201ENST00000300527 RPRMLQ8N4K4 120 aa11.71□□□□□ -0.53
COL6A2-201ENST00000300527 FDCSPQ8NFU4 85 aa11.71□□□□□ -0.53
COL6A2-201ENST00000300527 ZNF71Q9NQZ8 489 aaPredicted RBP11.71□□□□□ -0.53
COL6A2-201ENST00000300527 ZNF414Q96IQ9 312 aa11.71□□□□□ -0.54
COL6A2-201ENST00000300527 PRELID3AQ96N28 172 aa11.71□□□□□ -0.54
COL6A2-201ENST00000300527 K7EP34 96 aa11.7□□□□□ -0.54
COL6A2-201ENST00000300527 RPS20P60866 119 aaKnown RBP11.7□□□□□ -0.54
COL6A2-201ENST00000300527 ZADH2Q8N4Q0 377 aa11.7□□□□□ -0.54
COL6A2-201ENST00000300527 VSTM2AQ8TAG5 236 aa11.7□□□□□ -0.54
COL6A2-201ENST00000300527 TMEM186Q96B77 213 aa11.7□□□□□ -0.54
COL6A2-201ENST00000300527 SPTBN2O15020 2390 aa11.7□□□□□ -0.54
COL6A2-201ENST00000300527 FSTL3O95633 263 aa11.7□□□□□ -0.54
COL6A2-201ENST00000300527 GP9P14770 177 aa11.7□□□□□ -0.54
COL6A2-201ENST00000300527 ATP5IP56385 69 aaPredicted RBP11.7□□□□□ -0.54
COL6A2-201ENST00000300527 KLF12Q9Y4X4 402 aa11.7□□□□□ -0.54
COL6A2-201ENST00000300527 SLC25A15Q9Y619 301 aa11.7□□□□□ -0.54
COL6A2-201ENST00000300527 DMXL2Q8TDJ6 3036 aa11.7□□□□□ -0.54
COL6A2-201ENST00000300527 IGLV1-44P01699 117 aa11.7□□□□□ -0.54
COL6A2-201ENST00000300527 FABP2P12104 132 aa11.7□□□□□ -0.54
COL6A2-201ENST00000300527 FCER1GP30273 86 aa11.7□□□□□ -0.54
COL6A2-201ENST00000300527 RPL27AP46776 148 aaKnown RBP11.7□□□□□ -0.54
COL6A2-201ENST00000300527 SPRY4Q9C004 299 aa11.7□□□□□ -0.54
COL6A2-201ENST00000300527 SIGLEC8Q9NYZ4 499 aa11.7□□□□□ -0.54
COL6A2-201ENST00000300527 DKK2Q9UBU2 259 aa11.7□□□□□ -0.54
COL6A2-201ENST00000300527 CACNA1HO95180 2353 aa11.69□□□□□ -0.54
COL6A2-201ENST00000300527 LHBP01229 141 aa11.69□□□□□ -0.54
COL6A2-201ENST00000300527 CT45A10P0DMU9 189 aa11.69□□□□□ -0.54
COL6A2-201ENST00000300527 TMEM167AQ8TBQ9 72 aa11.69□□□□□ -0.54
COL6A2-201ENST00000300527 C8orf49Q96NF6 230 aa11.69□□□□□ -0.54
COL6A2-201ENST00000300527 ZNF492Q9P255 531 aa11.69□□□□□ -0.54
COL6A2-201ENST00000300527 PRR33A8MZF0 331 aa11.69□□□□□ -0.54
COL6A2-201ENST00000300527 H3BRM9 83 aa11.69□□□□□ -0.54
COL6A2-201ENST00000300527 HAX1O00165 279 aa11.69□□□□□ -0.54
COL6A2-201ENST00000300527 SMAD7O15105 426 aaKnown RBP11.69□□□□□ -0.54
COL6A2-201ENST00000300527 SAMD13Q5VXD3 122 aa11.69□□□□□ -0.54
COL6A2-201ENST00000300527 ZNF788Q6ZQV5 615 aa11.69□□□□□ -0.54
COL6A2-201ENST00000300527 G3V4G9 280 aa11.68□□□□□ -0.54
COL6A2-201ENST00000300527 LYZL1Q6UWQ5 148 aa11.68□□□□□ -0.54
COL6A2-201ENST00000300527 IGFBPL1Q8WX77 278 aa11.68□□□□□ -0.54
COL6A2-201ENST00000300527 MED13LQ71F56 2210 aa11.68□□□□□ -0.54
COL6A2-201ENST00000300527 GLRXP35754 106 aa11.68□□□□□ -0.54
COL6A2-201ENST00000300527 CT83Q5H943 113 aa11.68□□□□□ -0.54
COL6A2-201ENST00000300527 TMEM200BQ69YZ2 307 aa11.68□□□□□ -0.54
COL6A2-201ENST00000300527 C16orf54Q6UWD8 224 aa11.68□□□□□ -0.54
COL6A2-201ENST00000300527 ZNF833PQ6ZTB9 187 aa11.68□□□□□ -0.54
COL6A2-201ENST00000300527 PRSS1P07477 247 aa11.68□□□□□ -0.54
COL6A2-201ENST00000300527 HSD52Q0P140 79 aa11.68□□□□□ -0.54
COL6A2-201ENST00000300527 THAP8Q8NA92 274 aa11.68□□□□□ -0.54
COL6A2-201ENST00000300527 RASL11BQ9BPW5 248 aa11.68□□□□□ -0.54
COL6A2-201ENST00000300527 SLC25A39Q9BZJ4 359 aaPredicted RBP11.68□□□□□ -0.54
COL6A2-201ENST00000300527 PSG8Q9UQ74 426 aa11.68□□□□□ -0.54
COL6A2-201ENST00000300527 PPIAL4CA0A0B4J2A2 164 aa11.67□□□□□ -0.54
COL6A2-201ENST00000300527 TEX48A0A1B0GUV7 120 aa11.67□□□□□ -0.54
COL6A2-201ENST00000300527 PPIAL4GP0DN37 164 aa11.67□□□□□ -0.54
COL6A2-201ENST00000300527 CKS2P33552 79 aa11.67□□□□□ -0.54
COL6A2-201ENST00000300527 FAM27E3Q08E93 113 aa11.67□□□□□ -0.54
COL6A2-201ENST00000300527 SAMD5Q5TGI4 173 aa11.67□□□□□ -0.54
COL6A2-201ENST00000300527 C8orf46Q8TAG6 207 aa11.67□□□□□ -0.54
COL6A2-201ENST00000300527 TMEM133Q9H2Q1 129 aa11.67□□□□□ -0.54
COL6A2-201ENST00000300527 SH3BGRL2Q9UJC5 107 aa11.67□□□□□ -0.54
COL6A2-201ENST00000300527 KALRNO60229 2985 aa11.67□□□□□ -0.54
COL6A2-201ENST00000300527 IGHV3OR16-8A0A075B7F1 116 aa11.67□□□□□ -0.54
COL6A2-201ENST00000300527 C1orf162Q8NEQ5 155 aaPredicted RBP11.67□□□□□ -0.54
COL6A2-201ENST00000300527 IFI27L1Q96BM0 104 aa11.67□□□□□ -0.54
COL6A2-201ENST00000300527 GFRA4Q9GZZ7 299 aa11.67□□□□□ -0.54
COL6A2-201ENST00000300527 OTORQ9NRC9 128 aa11.67□□□□□ -0.54
COL6A2-201ENST00000300527 A0A1W2PPM0 123 aa11.66□□□□□ -0.54
COL6A2-201ENST00000300527 FGF6P10767 208 aa11.66□□□□□ -0.54
COL6A2-201ENST00000300527 TWIST1Q15672 202 aa11.66□□□□□ -0.54
COL6A2-201ENST00000300527 UFSP1Q6NVU6 142 aa11.66□□□□□ -0.54
COL6A2-201ENST00000300527 LYPD2Q6UXB3 125 aa11.66□□□□□ -0.54
COL6A2-201ENST00000300527 BCL6BQ8N143 479 aaPredicted RBP11.66□□□□□ -0.54
COL6A2-201ENST00000300527 NHP2Q9NX24 153 aaKnown RBP11.66□□□□□ -0.54
COL6A2-201ENST00000300527 LINC00312Q9Y6C7 94 aa11.66□□□□□ -0.54
COL6A2-201ENST00000300527 CNIH1O95406 144 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms