RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 TEX45Q8NA69 505 aa4.03□□□□□ -1.76
CSMD3-201ENST00000297405 SSC4DQ8WTU2 575 aa4.03□□□□□ -1.76
CSMD3-201ENST00000297405 HLA-DRB4X5D2U9 266 aa4.03□□□□□ -1.76
CSMD3-201ENST00000297405 CXCL13O43927 109 aa4.03□□□□□ -1.76
CSMD3-201ENST00000297405 NDUFB8O95169 186 aa4.03□□□□□ -1.76
CSMD3-201ENST00000297405 THBDP07204 575 aa4.03□□□□□ -1.76
CSMD3-201ENST00000297405 HERV-K104P63124 156 aa4.03□□□□□ -1.76
CSMD3-201ENST00000297405 Q6ZNB5 142 aa4.03□□□□□ -1.76
CSMD3-201ENST00000297405 TMEM14EPQ6UXP3 125 aa4.03□□□□□ -1.76
CSMD3-201ENST00000297405 LYPD6BQ8NI32 183 aa4.03□□□□□ -1.76
CSMD3-201ENST00000297405 CALYQ9NYX4 217 aa4.03□□□□□ -1.76
CSMD3-201ENST00000297405 BGLAPP02818 100 aa4.03□□□□□ -1.76
CSMD3-201ENST00000297405 CD28P10747 220 aa4.03□□□□□ -1.76
CSMD3-201ENST00000297405 BTCP35070 178 aa4.03□□□□□ -1.76
CSMD3-201ENST00000297405 LHFPL1Q86WI0 220 aa4.03□□□□□ -1.76
CSMD3-201ENST00000297405 CARD19Q96LW7 228 aa4.03□□□□□ -1.76
CSMD3-201ENST00000297405 PRDM6Q9NQX0 595 aa4.03□□□□□ -1.76
CSMD3-201ENST00000297405 CCL2P13500 99 aa4.03□□□□□ -1.76
CSMD3-201ENST00000297405 PRCDQ00LT1 54 aa4.03□□□□□ -1.76
CSMD3-201ENST00000297405 ZIC1Q15915 447 aa4.03□□□□□ -1.76
CSMD3-201ENST00000297405 PRSS41Q7RTY9 318 aa4.03□□□□□ -1.76
CSMD3-201ENST00000297405 HECTD1Q9ULT8 2610 aa4.03□□□□□ -1.76
CSMD3-201ENST00000297405 RHOHQ15669 191 aa4.03□□□□□ -1.76
CSMD3-201ENST00000297405 LRRC75A-AS1Q8N1F1 130 aa4.03□□□□□ -1.76
CSMD3-201ENST00000297405 IGF2RP11717 2491 aa4.03□□□□□ -1.76
CSMD3-201ENST00000297405 FAM236AA0A1B0GUQ0 79 aa4.03□□□□□ -1.76
CSMD3-201ENST00000297405 FAM236BA0A1B0GV22 79 aa4.03□□□□□ -1.76
CSMD3-201ENST00000297405 C22orf46C9J442 243 aa4.03□□□□□ -1.76
CSMD3-201ENST00000297405 PPIHO43447 177 aaKnown RBP4.03□□□□□ -1.76
CSMD3-201ENST00000297405 FAM214BQ7L5A3 538 aa4.03□□□□□ -1.76
CSMD3-201ENST00000297405 CD3EP07766 207 aa4.03□□□□□ -1.77
CSMD3-201ENST00000297405 ST6GALNAC6Q969X2 333 aa4.03□□□□□ -1.77
CSMD3-201ENST00000297405 SPRY3O43610 288 aa4.02□□□□□ -1.77
CSMD3-201ENST00000297405 A0A087WX48 190 aa4.02□□□□□ -1.77
CSMD3-201ENST00000297405 A0A1B0GX51 115 aa4.02□□□□□ -1.77
CSMD3-201ENST00000297405 DEFB108AA8MXU0 73 aa4.02□□□□□ -1.77
CSMD3-201ENST00000297405 LIFP15018 202 aa4.02□□□□□ -1.77
CSMD3-201ENST00000297405 C8orf86Q6ZUL3 223 aa4.02□□□□□ -1.77
CSMD3-201ENST00000297405 ANAPC10Q9UM13 185 aa4.02□□□□□ -1.77
CSMD3-201ENST00000297405 IGHV1-69DA0A0B4J2H0 117 aa4.02□□□□□ -1.77
CSMD3-201ENST00000297405 D6R8Y8 96 aa4.02□□□□□ -1.77
CSMD3-201ENST00000297405 TGFAP01135 160 aa4.02□□□□□ -1.77
CSMD3-201ENST00000297405 WDR83OSQ9Y284 106 aa4.02□□□□□ -1.77
CSMD3-201ENST00000297405 LENEPQ9Y5L5 61 aa4.02□□□□□ -1.77
CSMD3-201ENST00000297405 MLST8Q9BVC4 326 aa4.02□□□□□ -1.77
CSMD3-201ENST00000297405 TMEM256-PLSCR3K7ERE1 68 aa4.02□□□□□ -1.77
CSMD3-201ENST00000297405 TM4SF4P48230 202 aa4.02□□□□□ -1.77
CSMD3-201ENST00000297405 CCL8P80075 99 aa4.02□□□□□ -1.77
CSMD3-201ENST00000297405 TMEM256Q8N2U0 113 aa4.02□□□□□ -1.77
CSMD3-201ENST00000297405 DLL3Q9NYJ7 618 aa4.02□□□□□ -1.77
CSMD3-201ENST00000297405 C21orf62Q9NYP8 219 aa4.02□□□□□ -1.77
CSMD3-201ENST00000297405 LINC00312Q9Y6C7 94 aa4.02□□□□□ -1.77
CSMD3-201ENST00000297405 C9JQL5 133 aa4.02□□□□□ -1.77
CSMD3-201ENST00000297405 NDUFA7O95182 113 aa4.02□□□□□ -1.77
CSMD3-201ENST00000297405 MDKP21741 143 aaPredicted RBP4.02□□□□□ -1.77
CSMD3-201ENST00000297405 FAM74A4Q5TZK3 123 aa4.02□□□□□ -1.77
CSMD3-201ENST00000297405 Q6Q795 121 aa4.02□□□□□ -1.77
CSMD3-201ENST00000297405 ZNF826PQ6ZT77 177 aa4.02□□□□□ -1.77
CSMD3-201ENST00000297405 IDI2-AS1Q9NZ38 188 aa4.02□□□□□ -1.77
CSMD3-201ENST00000297405 SMIM27A0A1W2PRY6 76 aa4.02□□□□□ -1.77
CSMD3-201ENST00000297405 OOSP1A8MZH6 123 aa4.02□□□□□ -1.77
CSMD3-201ENST00000297405 EREGO14944 169 aa4.02□□□□□ -1.77
CSMD3-201ENST00000297405 ZG16O60844 167 aa4.02□□□□□ -1.77
CSMD3-201ENST00000297405 PTGER1P34995 402 aa4.02□□□□□ -1.77
CSMD3-201ENST00000297405 ZNF493Q6ZR52 646 aa4.02□□□□□ -1.77
CSMD3-201ENST00000297405 METRNQ9UJH8 293 aa4.02□□□□□ -1.77
CSMD3-201ENST00000297405 TRAV26-1A0A087WT03 109 aa4.02□□□□□ -1.77
CSMD3-201ENST00000297405 IGLC1P0CG04 106 aa4.02□□□□□ -1.77
CSMD3-201ENST00000297405 TRAV8-3A0A0A6YYJ7 113 aa4.01□□□□□ -1.77
CSMD3-201ENST00000297405 RPS27P42677 84 aaKnown RBP4.01□□□□□ -1.77
CSMD3-201ENST00000297405 C1orf61Q13536 156 aa4.01□□□□□ -1.77
CSMD3-201ENST00000297405 COL9A3Q14050 684 aaPredicted RBP4.01□□□□□ -1.77
CSMD3-201ENST00000297405 DEFB133Q30KQ1 61 aa4.01□□□□□ -1.77
CSMD3-201ENST00000297405 SPINK9Q5DT21 86 aa4.01□□□□□ -1.77
CSMD3-201ENST00000297405 SLC25A47Q6Q0C1 308 aa4.01□□□□□ -1.77
CSMD3-201ENST00000297405 TEX48A0A1B0GUV7 120 aa4.01□□□□□ -1.77
CSMD3-201ENST00000297405 PRSS46E5RG02 174 aa4.01□□□□□ -1.77
CSMD3-201ENST00000297405 DEFB108BQ8NET1 73 aa4.01□□□□□ -1.77
CSMD3-201ENST00000297405 ORMDL1Q9P0S3 153 aa4.01□□□□□ -1.77
CSMD3-201ENST00000297405 STAB2Q8WWQ8 2551 aa4.01□□□□□ -1.77
CSMD3-201ENST00000297405 ZNF138P52744 262 aa4.01□□□□□ -1.77
CSMD3-201ENST00000297405 ERCC8Q13216 396 aa4.01□□□□□ -1.77
CSMD3-201ENST00000297405 NPIPB5A8MRT5 1133 aa4.01□□□□□ -1.77
CSMD3-201ENST00000297405 CCL25O15444 150 aa4.01□□□□□ -1.77
CSMD3-201ENST00000297405 LTBP1Q14766 1721 aa4.01□□□□□ -1.77
CSMD3-201ENST00000297405 J3QRE1 110 aa4.01□□□□□ -1.77
CSMD3-201ENST00000297405 EGR4Q05215 589 aa4.01□□□□□ -1.77
CSMD3-201ENST00000297405 TCF15Q12870 199 aa4.01□□□□□ -1.77
CSMD3-201ENST00000297405 SPATA46Q5T0L3 261 aa4.01□□□□□ -1.77
CSMD3-201ENST00000297405 TMEFF1Q8IYR6 380 aa4.01□□□□□ -1.77
CSMD3-201ENST00000297405 PIFOQ8TCI5 191 aa4.01□□□□□ -1.77
CSMD3-201ENST00000297405 FOXI1Q12951 378 aa4.01□□□□□ -1.77
CSMD3-201ENST00000297405 RNF152Q8N8N0 203 aa4.01□□□□□ -1.77
CSMD3-201ENST00000297405 NKAPP1Q8N9T2 125 aa4.01□□□□□ -1.77
CSMD3-201ENST00000297405 MRPS18CQ9Y3D5 142 aaKnown RBP4.01□□□□□ -1.77
CSMD3-201ENST00000297405 IGLV1-36A0A0B4J1U3 117 aa4.01□□□□□ -1.77
CSMD3-201ENST00000297405 IGHV3-9P01782 118 aa4.01□□□□□ -1.77
CSMD3-201ENST00000297405 CRIM1Q9NZV1 1036 aa4.01□□□□□ -1.77
CSMD3-201ENST00000297405 COLQQ9Y215 455 aaPredicted RBP4.01□□□□□ -1.77
CSMD3-201ENST00000297405 A0A0G2JK05 382 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms