RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 TECRQ9NZ01 308 aaKnown RBP12.2□□□□□ -0.46
LSM6-201ENST00000296581 MDFIC2A0A1B0GVS7 189 aa12.19□□□□□ -0.46
LSM6-201ENST00000296581 PLP1P60201 277 aa12.19□□□□□ -0.46
LSM6-201ENST00000296581 ECSCRQ19T08 205 aa12.19□□□□□ -0.46
LSM6-201ENST00000296581 PATE2Q6UY27 113 aa12.19□□□□□ -0.46
LSM6-201ENST00000296581 TMUB1Q9BVT8 246 aa12.19□□□□□ -0.46
LSM6-201ENST00000296581 CTDSP1Q9GZU7 261 aa12.19□□□□□ -0.46
LSM6-201ENST00000296581 COX7A2P2O60397 106 aa12.18□□□□□ -0.46
LSM6-201ENST00000296581 PAGE4O60829 102 aa12.18□□□□□ -0.46
LSM6-201ENST00000296581 TOMM40O96008 361 aa12.18□□□□□ -0.46
LSM6-201ENST00000296581 GCHFRP30047 84 aa12.18□□□□□ -0.46
LSM6-201ENST00000296581 FOXC2Q99958 501 aa12.18□□□□□ -0.46
LSM6-201ENST00000296581 IGKV1-17P01599 117 aa12.18□□□□□ -0.46
LSM6-201ENST00000296581 TDRG1Q3Y452 100 aa12.18□□□□□ -0.46
LSM6-201ENST00000296581 C19orf54Q5BKX5 351 aa12.18□□□□□ -0.46
LSM6-201ENST00000296581 C10orf113Q5VZT2 155 aa12.18□□□□□ -0.46
LSM6-201ENST00000296581 FAM90A2PQ658T7 463 aa12.18□□□□□ -0.46
LSM6-201ENST00000296581 TEX43Q6ZNM6 134 aa12.18□□□□□ -0.46
LSM6-201ENST00000296581 STPG4Q8N801 248 aa12.18□□□□□ -0.46
LSM6-201ENST00000296581 NUDT11Q96G61 164 aa12.18□□□□□ -0.46
LSM6-201ENST00000296581 MS4A10Q96PG2 267 aa12.18□□□□□ -0.46
LSM6-201ENST00000296581 C8orf88P0DMB2 117 aa12.17□□□□□ -0.46
LSM6-201ENST00000296581 MFAP4P55083 255 aa12.17□□□□□ -0.46
LSM6-201ENST00000296581 TAS2R45P59539 299 aa12.17□□□□□ -0.46
LSM6-201ENST00000296581 TMEM183BQ1AE95 376 aa12.17□□□□□ -0.46
LSM6-201ENST00000296581 TIGITQ495A1 244 aa12.17□□□□□ -0.46
LSM6-201ENST00000296581 TOMM20LQ6UXN7 152 aa12.17□□□□□ -0.46
LSM6-201ENST00000296581 PQLC2Q6ZP29 291 aa12.17□□□□□ -0.46
LSM6-201ENST00000296581 TRBV9A0A0B4J1U6 114 aa12.17□□□□□ -0.46
LSM6-201ENST00000296581 F8W735 103 aaPredicted RBP12.17□□□□□ -0.46
LSM6-201ENST00000296581 G3V318 75 aa12.17□□□□□ -0.46
LSM6-201ENST00000296581 M0QZ24 198 aa12.17□□□□□ -0.46
LSM6-201ENST00000296581 OR2J3O76001 311 aa12.17□□□□□ -0.46
LSM6-201ENST00000296581 PFN1P07737 140 aaKnown RBP12.17□□□□□ -0.46
LSM6-201ENST00000296581 ACTL10Q5JWF8 245 aa12.17□□□□□ -0.46
LSM6-201ENST00000296581 LINC01551Q86U37 167 aa12.17□□□□□ -0.46
LSM6-201ENST00000296581 ZNF503Q96F45 646 aa12.17□□□□□ -0.46
LSM6-201ENST00000296581 FAM167A-AS1Q96KT0 104 aa12.17□□□□□ -0.46
LSM6-201ENST00000296581 CELSR1Q9NYQ6 3014 aa12.16□□□□□ -0.46
LSM6-201ENST00000296581 TRAV30A0A087WSZ9 112 aa12.16□□□□□ -0.46
LSM6-201ENST00000296581 TMEM250H0YL14 139 aa12.16□□□□□ -0.46
LSM6-201ENST00000296581 IGHG2P01859 326 aa12.16□□□□□ -0.46
LSM6-201ENST00000296581 FCGR2BP31994 310 aaPredicted RBP12.16□□□□□ -0.46
LSM6-201ENST00000296581 FAM3BP58499 235 aaPredicted RBP12.16□□□□□ -0.46
LSM6-201ENST00000296581 CIARTQ8N365 385 aaPredicted RBP12.16□□□□□ -0.46
LSM6-201ENST00000296581 VN1R17PQ8TDU5 208 aa12.16□□□□□ -0.46
LSM6-201ENST00000296581 C21orf62Q9NYP8 219 aa12.16□□□□□ -0.46
LSM6-201ENST00000296581 FBXL7Q9UJT9 491 aa12.16□□□□□ -0.46
LSM6-201ENST00000296581 PAM16Q9Y3D7 125 aa12.16□□□□□ -0.46
LSM6-201ENST00000296581 PDZD2O15018 2839 aa12.16□□□□□ -0.46
LSM6-201ENST00000296581 IGF1P05019 195 aa12.16□□□□□ -0.46
LSM6-201ENST00000296581 PSG1P11464 419 aa12.16□□□□□ -0.46
LSM6-201ENST00000296581 IER3P46695 156 aa12.16□□□□□ -0.46
LSM6-201ENST00000296581 MORN5Q5VZ52 161 aa12.16□□□□□ -0.46
LSM6-201ENST00000296581 TXNDC17Q9BRA2 123 aa12.16□□□□□ -0.46
LSM6-201ENST00000296581 SLC25A2Q9BXI2 301 aa12.16□□□□□ -0.46
LSM6-201ENST00000296581 SDF2L1Q9HCN8 221 aa12.16□□□□□ -0.46
LSM6-201ENST00000296581 ZANQ9Y493 2812 aa12.15□□□□□ -0.46
LSM6-201ENST00000296581 TRAV41A0A0B4J266 112 aa12.15□□□□□ -0.46
LSM6-201ENST00000296581 TXN2Q99757 166 aa12.15□□□□□ -0.46
LSM6-201ENST00000296581 TMEM167BQ9NRX6 74 aa12.15□□□□□ -0.46
LSM6-201ENST00000296581 ZNF355PQ9NSJ1 428 aa12.15□□□□□ -0.46
LSM6-201ENST00000296581 ARL2-SNX15V9GYD0 113 aa12.15□□□□□ -0.46
LSM6-201ENST00000296581 GCN1Q92616 2671 aaKnown RBP12.15□□□□□ -0.46
LSM6-201ENST00000296581 C11orf94C9JXX5 98 aa12.14□□□□□ -0.47
LSM6-201ENST00000296581 GNG7O60262 68 aa12.14□□□□□ -0.47
LSM6-201ENST00000296581 HYPMO75409 117 aa12.14□□□□□ -0.47
LSM6-201ENST00000296581 IGHV4-59P01825 116 aa12.14□□□□□ -0.47
LSM6-201ENST00000296581 ORM2P19652 201 aa12.14□□□□□ -0.47
LSM6-201ENST00000296581 BMI1P35226 326 aa12.14□□□□□ -0.47
LSM6-201ENST00000296581 UBE2G2P60604 165 aa12.14□□□□□ -0.47
LSM6-201ENST00000296581 YPEL3P61236 119 aaPredicted RBP12.14□□□□□ -0.47
LSM6-201ENST00000296581 OR2D3Q8NGH3 330 aa12.14□□□□□ -0.47
LSM6-201ENST00000296581 OR1B1Q8NGR6 318 aa12.14□□□□□ -0.47
LSM6-201ENST00000296581 OR4F5Q8NH21 305 aa12.14□□□□□ -0.47
LSM6-201ENST00000296581 UHRF2Q96PU4 802 aa12.14□□□□□ -0.47
LSM6-201ENST00000296581 OR4F4Q96R69 305 aa12.14□□□□□ -0.47
LSM6-201ENST00000296581 S4R3C0 116 aa12.14□□□□□ -0.47
LSM6-201ENST00000296581 TRAV5A0A0B4J249 113 aa12.14□□□□□ -0.47
LSM6-201ENST00000296581 RPL19P84098 196 aaKnown RBP12.14□□□□□ -0.47
LSM6-201ENST00000296581 LINC00305Q7Z4B0 112 aa12.14□□□□□ -0.47
LSM6-201ENST00000296581 VAMP8Q9BV40 100 aa12.14□□□□□ -0.47
LSM6-201ENST00000296581 ITPR3Q14573 2671 aa12.14□□□□□ -0.47
LSM6-201ENST00000296581 UNC79Q9P2D8 2635 aa12.14□□□□□ -0.47
LSM6-201ENST00000296581 OR7C2O60412 319 aa12.13□□□□□ -0.47
LSM6-201ENST00000296581 ATP5G3P48201 142 aa12.13□□□□□ -0.47
LSM6-201ENST00000296581 CNN1P51911 297 aaKnown RBP12.13□□□□□ -0.47
LSM6-201ENST00000296581 RHOGP84095 191 aa12.13□□□□□ -0.47
LSM6-201ENST00000296581 NECAP1Q8NC96 275 aa12.13□□□□□ -0.47
LSM6-201ENST00000296581 OR4C5Q8NGB2 326 aa12.13□□□□□ -0.47
LSM6-201ENST00000296581 BLCAPP62952 87 aa12.13□□□□□ -0.47
LSM6-201ENST00000296581 Q56UQ5 140 aa12.13□□□□□ -0.47
LSM6-201ENST00000296581 CST9LP1Q5W188 147 aa12.13□□□□□ -0.47
LSM6-201ENST00000296581 Q6YL49 198 aa12.13□□□□□ -0.47
LSM6-201ENST00000296581 OR5AU1Q8NGC0 362 aa12.13□□□□□ -0.47
LSM6-201ENST00000296581 YTHDF2Q9Y5A9 579 aaKnown RBP12.13□□□□□ -0.47
LSM6-201ENST00000296581 PDE6DO43924 150 aa12.12□□□□□ -0.47
LSM6-201ENST00000296581 C15orf32Q32M92 178 aa12.12□□□□□ -0.47
LSM6-201ENST00000296581 OR51G1Q8NGK1 321 aa12.12□□□□□ -0.47
LSM6-201ENST00000296581 ZNF502Q8TBZ5 544 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms