RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 A0A1W2PRX2 142 aa9.54□□□□□ -0.88
SNIP1-201ENST00000296215 CRLF1O75462 422 aa9.54□□□□□ -0.88
SNIP1-201ENST00000296215 TCL1BO95988 128 aa9.54□□□□□ -0.88
SNIP1-201ENST00000296215 ZNF441Q8N8Z8 693 aa9.54□□□□□ -0.88
SNIP1-201ENST00000296215 C4orf51C9J302 202 aa9.54□□□□□ -0.88
SNIP1-201ENST00000296215 CLLU1OSQ5K130 101 aa9.54□□□□□ -0.88
SNIP1-201ENST00000296215 DNAJC13O75165 2243 aa9.54□□□□□ -0.88
SNIP1-201ENST00000296215 A0A0B4J2C4 111 aa9.54□□□□□ -0.88
SNIP1-201ENST00000296215 FAM240AA0A1B0GVK7 77 aa9.54□□□□□ -0.88
SNIP1-201ENST00000296215 SLC25A47Q6Q0C1 308 aa9.54□□□□□ -0.88
SNIP1-201ENST00000296215 ZFP2Q6ZN57 461 aa9.54□□□□□ -0.88
SNIP1-201ENST00000296215 RNF182Q8N6D2 247 aa9.54□□□□□ -0.88
SNIP1-201ENST00000296215 KIAA1551Q9HCM1 1747 aa9.53□□□□□ -0.88
SNIP1-201ENST00000296215 A0A1W2PQD3 144 aa9.53□□□□□ -0.88
SNIP1-201ENST00000296215 FHL5Q5TD97 284 aa9.53□□□□□ -0.88
SNIP1-201ENST00000296215 Q6ZQT7 251 aa9.53□□□□□ -0.88
SNIP1-201ENST00000296215 TRGV9Q99603 122 aa9.53□□□□□ -0.88
SNIP1-201ENST00000296215 RLFQ13129 1914 aa9.53□□□□□ -0.88
SNIP1-201ENST00000296215 SHISA9B4DS77 424 aa9.52□□□□□ -0.88
SNIP1-201ENST00000296215 CNTFRP26992 372 aa9.52□□□□□ -0.88
SNIP1-201ENST00000296215 RSPO4Q2I0M5 234 aaPredicted RBP9.52□□□□□ -0.88
SNIP1-201ENST00000296215 IGFBPL1Q8WX77 278 aa9.52□□□□□ -0.88
SNIP1-201ENST00000296215 FGF22Q9HCT0 170 aa9.52□□□□□ -0.88
SNIP1-201ENST00000296215 IGKV1-8A0A0C4DH67 115 aa9.52□□□□□ -0.89
SNIP1-201ENST00000296215 TIMM23O14925 209 aa9.52□□□□□ -0.89
SNIP1-201ENST00000296215 Q6ZS92 163 aa9.52□□□□□ -0.89
SNIP1-201ENST00000296215 IGHV3OR15-7A0A075B7D8 119 aa9.52□□□□□ -0.89
SNIP1-201ENST00000296215 C15orf62A8K5M9 175 aa9.52□□□□□ -0.89
SNIP1-201ENST00000296215 HMGA1P17096 107 aaKnown RBP9.52□□□□□ -0.89
SNIP1-201ENST00000296215 RPL11P62913 178 aaKnown RBP9.52□□□□□ -0.89
SNIP1-201ENST00000296215 Q71RC1 249 aaPredicted RBP9.52□□□□□ -0.89
SNIP1-201ENST00000296215 LINC00526Q96FQ7 95 aa9.52□□□□□ -0.89
SNIP1-201ENST00000296215 DAD1P61803 113 aa9.52□□□□□ -0.89
SNIP1-201ENST00000296215 FOCADQ5VW36 1801 aa9.52□□□□□ -0.89
SNIP1-201ENST00000296215 DOCK2Q92608 1830 aa9.52□□□□□ -0.89
SNIP1-201ENST00000296215 POLR2AP24928 1970 aaKnown RBP9.52□□□□□ -0.89
SNIP1-201ENST00000296215 TRBV10-2A0A0K0K1G8 114 aa9.51□□□□□ -0.89
SNIP1-201ENST00000296215 TEX49A0A1B0GTD5 131 aa9.51□□□□□ -0.89
SNIP1-201ENST00000296215 CISD3P0C7P0 127 aa9.51□□□□□ -0.89
SNIP1-201ENST00000296215 DIAPH2-AS1Q14236 149 aa9.51□□□□□ -0.89
SNIP1-201ENST00000296215 NFAM1Q8NET5 270 aaPredicted RBP9.51□□□□□ -0.89
SNIP1-201ENST00000296215 COL24A1Q17RW2 1714 aa9.51□□□□□ -0.89
SNIP1-201ENST00000296215 IGHV3-64A0A075B6Q5 118 aa9.51□□□□□ -0.89
SNIP1-201ENST00000296215 FAM104BQ5XKR9 115 aa9.51□□□□□ -0.89
SNIP1-201ENST00000296215 ZNF493Q6ZR52 646 aa9.51□□□□□ -0.89
SNIP1-201ENST00000296215 LAMTOR3Q9UHA4 124 aa9.51□□□□□ -0.89
SNIP1-201ENST00000296215 ARFGEF1Q9Y6D6 1849 aa9.51□□□□□ -0.89
SNIP1-201ENST00000296215 ATG2BQ96BY7 2078 aa9.51□□□□□ -0.89
SNIP1-201ENST00000296215 TAF1LQ8IZX4 1826 aa9.51□□□□□ -0.89
SNIP1-201ENST00000296215 CCL1P22362 96 aa9.51□□□□□ -0.89
SNIP1-201ENST00000296215 HEATR5BQ9P2D3 2071 aa9.51□□□□□ -0.89
SNIP1-201ENST00000296215 FREM3P0C091 2139 aa9.51□□□□□ -0.89
SNIP1-201ENST00000296215 PI4KAP42356 2102 aa9.51□□□□□ -0.89
SNIP1-201ENST00000296215 IGHG2P01859 326 aa9.51□□□□□ -0.89
SNIP1-201ENST00000296215 CRYGBP07316 175 aa9.51□□□□□ -0.89
SNIP1-201ENST00000296215 CXCL13O43927 109 aa9.5□□□□□ -0.89
SNIP1-201ENST00000296215 CCL8P80075 99 aa9.5□□□□□ -0.89
SNIP1-201ENST00000296215 IMUPQ9GZP8 106 aa9.5□□□□□ -0.89
SNIP1-201ENST00000296215 NDUFC2-KCTD14E9PQ53 114 aa9.5□□□□□ -0.89
SNIP1-201ENST00000296215 C4orf26Q17RF5 130 aa9.5□□□□□ -0.89
SNIP1-201ENST00000296215 FAM53AQ6NSI3 398 aaPredicted RBP9.5□□□□□ -0.89
SNIP1-201ENST00000296215 KIAA2026Q5HYC2 2103 aa9.5□□□□□ -0.89
SNIP1-201ENST00000296215 MCM3APO60318 1980 aa9.5□□□□□ -0.89
SNIP1-201ENST00000296215 F8VRH5 84 aa9.5□□□□□ -0.89
SNIP1-201ENST00000296215 TCRAP04437 139 aa9.5□□□□□ -0.89
SNIP1-201ENST00000296215 DSCR4P56555 118 aaPredicted RBP9.5□□□□□ -0.89
SNIP1-201ENST00000296215 NHSQ6T4R5 1651 aa9.5□□□□□ -0.89
SNIP1-201ENST00000296215 IGKV3D-7A0A0C4DH55 119 aa9.49□□□□□ -0.89
SNIP1-201ENST00000296215 FAM27BQ5VT28 67 aa9.49□□□□□ -0.89
SNIP1-201ENST00000296215 DEFB108BQ8NET1 73 aa9.49□□□□□ -0.89
SNIP1-201ENST00000296215 KIR2DL5BQ8NHK3 375 aa9.49□□□□□ -0.89
SNIP1-201ENST00000296215 DOCK3Q8IZD9 2030 aa9.49□□□□□ -0.89
SNIP1-201ENST00000296215 PRRG2O14669 202 aa9.49□□□□□ -0.89
SNIP1-201ENST00000296215 RUNX3Q13761 415 aa9.49□□□□□ -0.89
SNIP1-201ENST00000296215 MPLKIPQ8TAP9 179 aa9.49□□□□□ -0.89
SNIP1-201ENST00000296215 RNF166Q96A37 237 aaPredicted RBP9.49□□□□□ -0.89
SNIP1-201ENST00000296215 C16orf92Q96LL3 132 aa9.49□□□□□ -0.89
SNIP1-201ENST00000296215 C1orf147Q96MC9 270 aaPredicted RBP9.49□□□□□ -0.89
SNIP1-201ENST00000296215 ZNF492Q9P255 531 aa9.49□□□□□ -0.89
SNIP1-201ENST00000296215 EDN2P20800 178 aa9.49□□□□□ -0.89
SNIP1-201ENST00000296215 IL17RELQ6ZVW7 336 aa9.49□□□□□ -0.89
SNIP1-201ENST00000296215 VWC2LB2RUY7 222 aa9.49□□□□□ -0.89
SNIP1-201ENST00000296215 PPP1R17O96001 155 aa9.49□□□□□ -0.89
SNIP1-201ENST00000296215 WIPF1O43516 503 aa9.48□□□□□ -0.89
SNIP1-201ENST00000296215 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.48□□□□□ -0.89
SNIP1-201ENST00000296215 ZNF329Q86UD4 541 aa9.48□□□□□ -0.89
SNIP1-201ENST00000296215 PHLDA3Q9Y5J5 127 aa9.48□□□□□ -0.89
SNIP1-201ENST00000296215 RP1L1Q8IWN7 2480 aaPredicted RBP9.48□□□□□ -0.89
SNIP1-201ENST00000296215 FAM90A9PA6NNJ1 464 aa9.48□□□□□ -0.89
SNIP1-201ENST00000296215 BRI3O95415 125 aa9.48□□□□□ -0.89
SNIP1-201ENST00000296215 ZNF625Q96I27 306 aaPredicted RBP9.48□□□□□ -0.89
SNIP1-201ENST00000296215 TANC1Q9C0D5 1861 aa9.48□□□□□ -0.89
SNIP1-201ENST00000296215 APELAP0DMC3 54 aa9.48□□□□□ -0.89
SNIP1-201ENST00000296215 Q9Y3F1 56 aa9.48□□□□□ -0.89
SNIP1-201ENST00000296215 H3BT86 120 aa9.47□□□□□ -0.89
SNIP1-201ENST00000296215 RPS28P62857 69 aaKnown RBP9.47□□□□□ -0.89
SNIP1-201ENST00000296215 TPRP12270 2363 aaKnown RBP9.47□□□□□ -0.89
SNIP1-201ENST00000296215 PRB4P10163 310 aaPredicted RBP9.47□□□□□ -0.89
SNIP1-201ENST00000296215 FHL1Q13642 323 aa9.47□□□□□ -0.89
SNIP1-201ENST00000296215 HCP5Q6MZN7 132 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 816 ms