RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 SHANK2-AS3Q9BTD1 123 aa14.47□□□□□ -0.09
PDLIM3-202ENST00000284770 MANBALQ9NQG1 85 aa14.47□□□□□ -0.09
PDLIM3-202ENST00000284770 IFNA1P01562 189 aa14.46□□□□□ -0.09
PDLIM3-202ENST00000284770 S100A7P31151 101 aa14.46□□□□□ -0.09
PDLIM3-202ENST00000284770 RAX2Q96IS3 184 aa14.46□□□□□ -0.09
PDLIM3-202ENST00000284770 H3BRN7 92 aa14.45□□□□□ -0.1
PDLIM3-202ENST00000284770 NPPCP23582 126 aa14.45□□□□□ -0.1
PDLIM3-202ENST00000284770 CRYBB3P26998 211 aa14.45□□□□□ -0.1
PDLIM3-202ENST00000284770 PPT1P50897 306 aa14.45□□□□□ -0.1
PDLIM3-202ENST00000284770 KLF5Q13887 457 aaPredicted RBP14.45□□□□□ -0.1
PDLIM3-202ENST00000284770 SUN5Q8TC36 379 aa14.45□□□□□ -0.1
PDLIM3-202ENST00000284770 RXFP4Q8TDU9 374 aa14.45□□□□□ -0.1
PDLIM3-202ENST00000284770 DUX3Q96PT4 197 aa14.45□□□□□ -0.1
PDLIM3-202ENST00000284770 VAX2Q9UIW0 290 aa14.45□□□□□ -0.1
PDLIM3-202ENST00000284770 CCL24O00175 119 aa14.45□□□□□ -0.1
PDLIM3-202ENST00000284770 LGALS9O00182 355 aa14.45□□□□□ -0.1
PDLIM3-202ENST00000284770 ZNF207O43670 478 aaKnown RBP14.45□□□□□ -0.1
PDLIM3-202ENST00000284770 OR7C2O60412 319 aa14.45□□□□□ -0.1
PDLIM3-202ENST00000284770 ADCYAP1P18509 176 aa14.45□□□□□ -0.1
PDLIM3-202ENST00000284770 FHL3Q13643 280 aa14.45□□□□□ -0.1
PDLIM3-202ENST00000284770 NSUN5P1Q3KNT7 163 aa14.45□□□□□ -0.1
PDLIM3-202ENST00000284770 REC114Q7Z4M0 266 aa14.45□□□□□ -0.1
PDLIM3-202ENST00000284770 C1QL4Q86Z23 238 aa14.45□□□□□ -0.1
PDLIM3-202ENST00000284770 CITED1Q99966 193 aa14.45□□□□□ -0.1
PDLIM3-202ENST00000284770 DAZ1Q9NQZ3 744 aaKnown RBP14.45□□□□□ -0.1
PDLIM3-202ENST00000284770 UFC1Q9Y3C8 167 aa14.45□□□□□ -0.1
PDLIM3-202ENST00000284770 ATRQ13535 2644 aa14.44□□□□□ -0.1
PDLIM3-202ENST00000284770 ZNF98A6NK75 572 aa14.44□□□□□ -0.1
PDLIM3-202ENST00000284770 K7EMT4 169 aa14.44□□□□□ -0.1
PDLIM3-202ENST00000284770 PAGE4O60829 102 aa14.44□□□□□ -0.1
PDLIM3-202ENST00000284770 SFTA3P0C7M3 94 aa14.44□□□□□ -0.1
PDLIM3-202ENST00000284770 TAGLN2P37802 199 aaKnown RBP14.44□□□□□ -0.1
PDLIM3-202ENST00000284770 SLURP1P55000 103 aa14.44□□□□□ -0.1
PDLIM3-202ENST00000284770 SYNJ2BPP57105 145 aa14.44□□□□□ -0.1
PDLIM3-202ENST00000284770 LEMD1Q68G75 181 aa14.44□□□□□ -0.1
PDLIM3-202ENST00000284770 SRP19P09132 144 aaKnown RBP14.43□□□□□ -0.1
PDLIM3-202ENST00000284770 TMEM158Q8WZ71 300 aa14.43□□□□□ -0.1
PDLIM3-202ENST00000284770 SLC35B3Q9H1N7 401 aa14.43□□□□□ -0.1
PDLIM3-202ENST00000284770 TMEM167BQ9NRX6 74 aa14.43□□□□□ -0.1
PDLIM3-202ENST00000284770 RNF24Q9Y225 148 aa14.43□□□□□ -0.1
PDLIM3-202ENST00000284770 U3KQE9 123 aa14.43□□□□□ -0.1
PDLIM3-202ENST00000284770 A8MWP6 167 aa14.42□□□□□ -0.1
PDLIM3-202ENST00000284770 BUB3O43684 328 aa14.42□□□□□ -0.1
PDLIM3-202ENST00000284770 CD81P60033 236 aa14.42□□□□□ -0.1
PDLIM3-202ENST00000284770 MEF2BQ02080 365 aaPredicted RBP14.42□□□□□ -0.1
PDLIM3-202ENST00000284770 TM4SF20Q53R12 229 aa14.42□□□□□ -0.1
PDLIM3-202ENST00000284770 C10orf91Q5T1B1 145 aa14.42□□□□□ -0.1
PDLIM3-202ENST00000284770 STXBP6Q8NFX7 210 aa14.42□□□□□ -0.1
PDLIM3-202ENST00000284770 APOHP02749 345 aaPredicted RBP14.42□□□□□ -0.1
PDLIM3-202ENST00000284770 OR10J4P0C629 311 aa14.42□□□□□ -0.1
PDLIM3-202ENST00000284770 PYYP10082 97 aa14.42□□□□□ -0.1
PDLIM3-202ENST00000284770 UBE2G2P60604 165 aa14.42□□□□□ -0.1
PDLIM3-202ENST00000284770 PAXXQ9BUH6 204 aa14.42□□□□□ -0.1
PDLIM3-202ENST00000284770 OR51M1Q9H341 326 aa14.42□□□□□ -0.1
PDLIM3-202ENST00000284770 GP9P14770 177 aa14.41□□□□□ -0.1
PDLIM3-202ENST00000284770 DLX4Q92988 240 aaPredicted RBP14.41□□□□□ -0.1
PDLIM3-202ENST00000284770 FXYD5Q96DB9 178 aa14.41□□□□□ -0.1
PDLIM3-202ENST00000284770 SEC11CQ9BY50 192 aa14.41□□□□□ -0.1
PDLIM3-202ENST00000284770 YTHDF2Q9Y5A9 579 aaKnown RBP14.41□□□□□ -0.1
PDLIM3-202ENST00000284770 IGHV7-4-1A0A0J9YVY3 117 aa14.4□□□□□ -0.1
PDLIM3-202ENST00000284770 UBE2L3P68036 154 aaKnown RBP14.4□□□□□ -0.1
PDLIM3-202ENST00000284770 C1orf194Q5T5A4 169 aa14.4□□□□□ -0.1
PDLIM3-202ENST00000284770 BPIFA4PQ86YQ2 179 aa14.4□□□□□ -0.1
PDLIM3-202ENST00000284770 ARL2-SNX15V9GYD0 113 aa14.4□□□□□ -0.1
PDLIM3-202ENST00000284770 IGHV3-49A0A0A0MS15 119 aa14.39□□□□□ -0.11
PDLIM3-202ENST00000284770 TMEM213A2RRL7 107 aa14.39□□□□□ -0.11
PDLIM3-202ENST00000284770 FAM74A7A6NL05 159 aa14.39□□□□□ -0.11
PDLIM3-202ENST00000284770 F8W036 122 aa14.39□□□□□ -0.11
PDLIM3-202ENST00000284770 NDUFS6O75380 124 aaKnown RBP14.39□□□□□ -0.11
PDLIM3-202ENST00000284770 MYCNOSP40205 109 aa14.39□□□□□ -0.11
PDLIM3-202ENST00000284770 CYB561D1Q8N8Q1 229 aa14.39□□□□□ -0.11
PDLIM3-202ENST00000284770 TMEM14CQ9P0S9 112 aa14.39□□□□□ -0.11
PDLIM3-202ENST00000284770 CARHSP1Q9Y2V2 147 aaKnown RBP14.39□□□□□ -0.11
PDLIM3-202ENST00000284770 FBN1P35555 2871 aaKnown RBP14.39□□□□□ -0.11
PDLIM3-202ENST00000284770 IGHV3OR16-13A0A075B7E8 117 aa14.39□□□□□ -0.11
PDLIM3-202ENST00000284770 IGHV3-74A0A0B4J1X5 117 aa14.39□□□□□ -0.11
PDLIM3-202ENST00000284770 IGHV3-66A0A0C4DH42 116 aa14.39□□□□□ -0.11
PDLIM3-202ENST00000284770 A0A1W2PS18 150 aa14.39□□□□□ -0.11
PDLIM3-202ENST00000284770 C11orf94C9JXX5 98 aa14.39□□□□□ -0.11
PDLIM3-202ENST00000284770 OR8I2Q8N0Y5 310 aa14.39□□□□□ -0.11
PDLIM3-202ENST00000284770 OR9G4Q8NGQ1 327 aa14.39□□□□□ -0.11
PDLIM3-202ENST00000284770 SMPXQ9UHP9 88 aa14.39□□□□□ -0.11
PDLIM3-202ENST00000284770 RPL7P18124 248 aaKnown RBP14.38□□□□□ -0.11
PDLIM3-202ENST00000284770 ATP5G3P48201 142 aa14.38□□□□□ -0.11
PDLIM3-202ENST00000284770 CST9LP1Q5W188 147 aa14.38□□□□□ -0.11
PDLIM3-202ENST00000284770 TXNDC17Q9BRA2 123 aa14.38□□□□□ -0.11
PDLIM3-202ENST00000284770 ZNF747Q9BV97 191 aa14.38□□□□□ -0.11
PDLIM3-202ENST00000284770 PEMTQ9UBM1 199 aa14.38□□□□□ -0.11
PDLIM3-202ENST00000284770 MRPS12O15235 138 aaKnown RBP14.37□□□□□ -0.11
PDLIM3-202ENST00000284770 C16orf54Q6UWD8 224 aa14.37□□□□□ -0.11
PDLIM3-202ENST00000284770 LURAP1LQ8IV03 231 aa14.37□□□□□ -0.11
PDLIM3-202ENST00000284770 GRAMD2BQ96HH9 432 aa14.37□□□□□ -0.11
PDLIM3-202ENST00000284770 GPR82Q96P67 336 aa14.37□□□□□ -0.11
PDLIM3-202ENST00000284770 OR4F4Q96R69 305 aa14.37□□□□□ -0.11
PDLIM3-202ENST00000284770 RHPN1-AS1Q9BWJ2 59 aa14.37□□□□□ -0.11
PDLIM3-202ENST00000284770 A0A1W2PRE2 83 aa14.37□□□□□ -0.11
PDLIM3-202ENST00000284770 C2orf70A6NJV1 201 aa14.37□□□□□ -0.11
PDLIM3-202ENST00000284770 CHEK1O14757 476 aa14.37□□□□□ -0.11
PDLIM3-202ENST00000284770 EDN2P20800 178 aa14.37□□□□□ -0.11
PDLIM3-202ENST00000284770 FAM90A2PQ658T7 463 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms