RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 IGHV3-49A0A0A0MS15 119 aa14.04□□□□□ -0.16
CAPN1-201ENST00000279247 XKRY2A2RUG3 117 aa14.04□□□□□ -0.16
CAPN1-201ENST00000279247 AVPP01185 164 aa14.04□□□□□ -0.16
CAPN1-201ENST00000279247 HLA-DRB1P01911 266 aa14.04□□□□□ -0.16
CAPN1-201ENST00000279247 S100A2P29034 98 aa14.04□□□□□ -0.16
CAPN1-201ENST00000279247 IER3P46695 156 aa14.04□□□□□ -0.16
CAPN1-201ENST00000279247 CMTM2Q8TAZ6 248 aa14.04□□□□□ -0.16
CAPN1-201ENST00000279247 CDC42EP3Q9UKI2 254 aa14.04□□□□□ -0.16
CAPN1-201ENST00000279247 PHOX2AO14813 284 aa14.04□□□□□ -0.16
CAPN1-201ENST00000279247 AMY1AP04745 511 aa14.04□□□□□ -0.16
CAPN1-201ENST00000279247 FABP1P07148 127 aa14.04□□□□□ -0.16
CAPN1-201ENST00000279247 PLP1P60201 277 aa14.04□□□□□ -0.16
CAPN1-201ENST00000279247 RPL15P61313 204 aaKnown RBP14.04□□□□□ -0.16
CAPN1-201ENST00000279247 GOLT1AQ6ZVE7 132 aa14.04□□□□□ -0.16
CAPN1-201ENST00000279247 OR10D4PQ8NGN7 298 aa14.04□□□□□ -0.16
CAPN1-201ENST00000279247 H3BUX3 64 aa14.04□□□□□ -0.16
CAPN1-201ENST00000279247 TOMM40O96008 361 aa14.04□□□□□ -0.16
CAPN1-201ENST00000279247 CLEC3BP05452 202 aa14.04□□□□□ -0.16
CAPN1-201ENST00000279247 PRRC2AP48634 2157 aaKnown RBP14.03□□□□□ -0.16
CAPN1-201ENST00000279247 VWC2LB2RUY7 222 aa14.03□□□□□ -0.16
CAPN1-201ENST00000279247 M0R3E3 92 aa14.03□□□□□ -0.16
CAPN1-201ENST00000279247 ZNF207O43670 478 aaKnown RBP14.03□□□□□ -0.16
CAPN1-201ENST00000279247 CDX1P47902 265 aaPredicted RBP14.03□□□□□ -0.16
CAPN1-201ENST00000279247 FOXL1Q12952 345 aa14.03□□□□□ -0.16
CAPN1-201ENST00000279247 CLEC19AQ6UXS0 136 aa14.03□□□□□ -0.16
CAPN1-201ENST00000279247 BPIFA4PQ86YQ2 179 aa14.03□□□□□ -0.16
CAPN1-201ENST00000279247 TEX15Q9BXT5 2789 aa14.03□□□□□ -0.16
CAPN1-201ENST00000279247 GRIFINA4D1Z8 144 aa14.03□□□□□ -0.16
CAPN1-201ENST00000279247 IGFL4Q6B9Z1 124 aa14.03□□□□□ -0.16
CAPN1-201ENST00000279247 OR4F17Q8NGA8 305 aa14.03□□□□□ -0.16
CAPN1-201ENST00000279247 SHANK2-AS3Q9BTD1 123 aa14.03□□□□□ -0.16
CAPN1-201ENST00000279247 PLA2G2AP14555 144 aa14.02□□□□□ -0.16
CAPN1-201ENST00000279247 NDUFS8O00217 210 aa14.02□□□□□ -0.17
CAPN1-201ENST00000279247 GCGP01275 180 aa14.02□□□□□ -0.17
CAPN1-201ENST00000279247 CTSGP08311 255 aa14.02□□□□□ -0.17
CAPN1-201ENST00000279247 C5orf56Q8N8D9 126 aa14.02□□□□□ -0.17
CAPN1-201ENST00000279247 NIT2Q9NQR4 276 aa14.02□□□□□ -0.17
CAPN1-201ENST00000279247 GAR1Q9NY12 217 aaKnown RBP14.02□□□□□ -0.17
CAPN1-201ENST00000279247 HIST1H1EP10412 219 aaKnown RBP14.01□□□□□ -0.17
CAPN1-201ENST00000279247 ADMP35318 185 aa14.01□□□□□ -0.17
CAPN1-201ENST00000279247 MYCNOSP40205 109 aa14.01□□□□□ -0.17
CAPN1-201ENST00000279247 ACTL10Q5JWF8 245 aa14.01□□□□□ -0.17
CAPN1-201ENST00000279247 PRNTQ86SH4 94 aa14.01□□□□□ -0.17
CAPN1-201ENST00000279247 C5orf17Q8NAS9 161 aa14.01□□□□□ -0.17
CAPN1-201ENST00000279247 NOL4LQ96MY1 436 aaPredicted RBP14.01□□□□□ -0.17
CAPN1-201ENST00000279247 TGOLN2O43493 480 aa14.01□□□□□ -0.17
CAPN1-201ENST00000279247 TCRAP04437 139 aa14.01□□□□□ -0.17
CAPN1-201ENST00000279247 H3BRN7 92 aa14.01□□□□□ -0.17
CAPN1-201ENST00000279247 KIAA1644Q3SXP7 199 aa14.01□□□□□ -0.17
CAPN1-201ENST00000279247 HIST3H2BBQ8N257 126 aa14.01□□□□□ -0.17
CAPN1-201ENST00000279247 PIFOQ8TCI5 191 aa14.01□□□□□ -0.17
CAPN1-201ENST00000279247 LY96Q9Y6Y9 160 aa14.01□□□□□ -0.17
CAPN1-201ENST00000279247 SNURFLB1AK76 121 aa14□□□□□ -0.17
CAPN1-201ENST00000279247 TAS2R60P59551 318 aa14□□□□□ -0.17
CAPN1-201ENST00000279247 LCNL1Q6ZST4 164 aa14□□□□□ -0.17
CAPN1-201ENST00000279247 TMEM68Q96MH6 324 aa14□□□□□ -0.17
CAPN1-201ENST00000279247 ATG101Q9BSB4 218 aa14□□□□□ -0.17
CAPN1-201ENST00000279247 TRAV30A0A087WSZ9 112 aa14□□□□□ -0.17
CAPN1-201ENST00000279247 CIARTQ8N365 385 aaPredicted RBP13.99□□□□□ -0.17
CAPN1-201ENST00000279247 NUDT10Q8NFP7 164 aa13.99□□□□□ -0.17
CAPN1-201ENST00000279247 NUDT11Q96G61 164 aa13.99□□□□□ -0.17
CAPN1-201ENST00000279247 MOB4Q9Y3A3 225 aa13.99□□□□□ -0.17
CAPN1-201ENST00000279247 TYMSP04818 313 aa13.99□□□□□ -0.17
CAPN1-201ENST00000279247 S100A8P05109 93 aa13.99□□□□□ -0.17
CAPN1-201ENST00000279247 LINC00322Q6ZN03 302 aaPredicted RBP13.99□□□□□ -0.17
CAPN1-201ENST00000279247 FAM110DQ8TAY7 271 aaPredicted RBP13.99□□□□□ -0.17
CAPN1-201ENST00000279247 BTF3L4Q96K17 158 aa13.99□□□□□ -0.17
CAPN1-201ENST00000279247 OSTCQ9NRP0 149 aa13.99□□□□□ -0.17
CAPN1-201ENST00000279247 GATCO43716 136 aaKnown RBP13.99□□□□□ -0.17
CAPN1-201ENST00000279247 TGFAP01135 160 aa13.99□□□□□ -0.17
CAPN1-201ENST00000279247 BLCAPP62952 87 aa13.99□□□□□ -0.17
CAPN1-201ENST00000279247 TMEM183BQ1AE95 376 aa13.99□□□□□ -0.17
CAPN1-201ENST00000279247 CDPF1Q6NVV7 123 aa13.99□□□□□ -0.17
CAPN1-201ENST00000279247 Q6ZS46 218 aa13.99□□□□□ -0.17
CAPN1-201ENST00000279247 ACANP16112 2415 aa13.98□□□□□ -0.17
CAPN1-201ENST00000279247 MYO9AB2RTY4 2548 aa13.98□□□□□ -0.17
CAPN1-201ENST00000279247 WI2-2373I1.2A0A1W2PRP0 233 aa13.98□□□□□ -0.17
CAPN1-201ENST00000279247 B4DSR2 109 aa13.98□□□□□ -0.17
CAPN1-201ENST00000279247 RNF223E7ERA6 249 aa13.98□□□□□ -0.17
CAPN1-201ENST00000279247 YPEL3P61236 119 aaPredicted RBP13.98□□□□□ -0.17
CAPN1-201ENST00000279247 PITPNC1Q9UKF7 332 aa13.98□□□□□ -0.17
CAPN1-201ENST00000279247 SELENOKQ9Y6D0 94 aa13.98□□□□□ -0.17
CAPN1-201ENST00000279247 TRBV19A0A075B6N1 114 aa13.98□□□□□ -0.17
CAPN1-201ENST00000279247 J3QKU1 62 aa13.98□□□□□ -0.17
CAPN1-201ENST00000279247 MRPL18Q9H0U6 180 aaKnown RBP13.98□□□□□ -0.17
CAPN1-201ENST00000279247 POLR3KQ9Y2Y1 108 aaPredicted RBP13.98□□□□□ -0.17
CAPN1-201ENST00000279247 SSTP61278 116 aa13.97□□□□□ -0.17
CAPN1-201ENST00000279247 GPR82Q96P67 336 aa13.97□□□□□ -0.17
CAPN1-201ENST00000279247 NAT8BQ9UHF3 227 aa13.97□□□□□ -0.17
CAPN1-201ENST00000279247 UNC79Q9P2D8 2635 aa13.97□□□□□ -0.17
CAPN1-201ENST00000279247 OTORQ9NRC9 128 aa13.97□□□□□ -0.17
CAPN1-201ENST00000279247 MXRA5Q9NR99 2828 aa13.97□□□□□ -0.17
CAPN1-201ENST00000279247 IGHV3-11P01762 117 aa13.96□□□□□ -0.17
CAPN1-201ENST00000279247 TRAV41A0A0B4J266 112 aa13.96□□□□□ -0.17
CAPN1-201ENST00000279247 TCF24Q7RTU0 167 aa13.96□□□□□ -0.17
CAPN1-201ENST00000279247 CCDC140Q96MF4 163 aa13.96□□□□□ -0.17
CAPN1-201ENST00000279247 RABAC1Q9UI14 185 aa13.96□□□□□ -0.17
CAPN1-201ENST00000279247 IGLC2P0DOY2 106 aa13.96□□□□□ -0.18
CAPN1-201ENST00000279247 HLA-DMBP28068 263 aa13.96□□□□□ -0.18
CAPN1-201ENST00000279247 PYY3Q5JQD4 70 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms