RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 C6orf226Q5I0X4 101 aa13.75□□□□□ -0.21
TSPAN3-201ENST00000267970 ZC2HC1BQ5TFG8 222 aa13.75□□□□□ -0.21
TSPAN3-201ENST00000267970 MORN5Q5VZ52 161 aa13.75□□□□□ -0.21
TSPAN3-201ENST00000267970 CHAC1Q9BUX1 264 aa13.75□□□□□ -0.21
TSPAN3-201ENST00000267970 ADCYAP1P18509 176 aa13.74□□□□□ -0.21
TSPAN3-201ENST00000267970 MPZP25189 248 aa13.74□□□□□ -0.21
TSPAN3-201ENST00000267970 TMEM213A2RRL7 107 aa13.74□□□□□ -0.21
TSPAN3-201ENST00000267970 J3QW42 95 aa13.74□□□□□ -0.21
TSPAN3-201ENST00000267970 DKK1O94907 266 aa13.74□□□□□ -0.21
TSPAN3-201ENST00000267970 WNT2P09544 360 aa13.74□□□□□ -0.21
TSPAN3-201ENST00000267970 FANCMQ8IYD8 2048 aa13.74□□□□□ -0.21
TSPAN3-201ENST00000267970 NHSL1Q5SYE7 1610 aa13.74□□□□□ -0.21
TSPAN3-201ENST00000267970 IGHV1-3A0A0C4DH29 117 aa13.74□□□□□ -0.21
TSPAN3-201ENST00000267970 NPSP0C0P6 89 aa13.74□□□□□ -0.21
TSPAN3-201ENST00000267970 YLPM1P49750 1951 aaKnown RBP13.74□□□□□ -0.21
TSPAN3-201ENST00000267970 PATJQ8NI35 1801 aa13.74□□□□□ -0.21
TSPAN3-201ENST00000267970 TRAV26-2A0A0B4J265 109 aa13.74□□□□□ -0.21
TSPAN3-201ENST00000267970 DEFB130BP0DP73 79 aa13.74□□□□□ -0.21
TSPAN3-201ENST00000267970 DEFB130AP0DP74 79 aa13.74□□□□□ -0.21
TSPAN3-201ENST00000267970 MAPK1IP1LQ8NDC0 245 aa13.74□□□□□ -0.21
TSPAN3-201ENST00000267970 DOCK10Q96BY6 2186 aa13.74□□□□□ -0.21
TSPAN3-201ENST00000267970 PPBPP02775 128 aa13.73□□□□□ -0.21
TSPAN3-201ENST00000267970 GAGE1Q13065 139 aa13.73□□□□□ -0.21
TSPAN3-201ENST00000267970 C5orf47Q569G3 176 aa13.73□□□□□ -0.21
TSPAN3-201ENST00000267970 MST1P26927 711 aa13.73□□□□□ -0.21
TSPAN3-201ENST00000267970 MED12Q93074 2177 aa13.73□□□□□ -0.21
TSPAN3-201ENST00000267970 CFHR2P36980 270 aa13.73□□□□□ -0.21
TSPAN3-201ENST00000267970 PRADC1Q9BSG0 188 aa13.73□□□□□ -0.21
TSPAN3-201ENST00000267970 MRPL14Q6P1L8 145 aaKnown RBP13.73□□□□□ -0.21
TSPAN3-201ENST00000267970 PSME4Q14997 1843 aa13.73□□□□□ -0.21
TSPAN3-201ENST00000267970 POLEQ07864 2286 aa13.73□□□□□ -0.21
TSPAN3-201ENST00000267970 ZNF672Q499Z4 452 aaPredicted RBP13.72□□□□□ -0.21
TSPAN3-201ENST00000267970 NEGR1Q7Z3B1 354 aa13.72□□□□□ -0.21
TSPAN3-201ENST00000267970 DOCK3Q8IZD9 2030 aa13.72□□□□□ -0.21
TSPAN3-201ENST00000267970 CEP250Q9BV73 2442 aa13.72□□□□□ -0.21
TSPAN3-201ENST00000267970 LEPROTO15243 131 aa13.72□□□□□ -0.21
TSPAN3-201ENST00000267970 IFI6P09912 130 aa13.72□□□□□ -0.21
TSPAN3-201ENST00000267970 LYPD2Q6UXB3 125 aa13.72□□□□□ -0.21
TSPAN3-201ENST00000267970 GREB1Q4ZG55 1949 aa13.72□□□□□ -0.21
TSPAN3-201ENST00000267970 TRBV24-1A0A075B6N3 115 aa13.72□□□□□ -0.21
TSPAN3-201ENST00000267970 OVOL1O14753 267 aa13.72□□□□□ -0.21
TSPAN3-201ENST00000267970 PSCAO43653 123 aa13.72□□□□□ -0.21
TSPAN3-201ENST00000267970 GAS1P54826 345 aa13.71□□□□□ -0.21
TSPAN3-201ENST00000267970 C20orf204Q6ZNR8 217 aa13.71□□□□□ -0.21
TSPAN3-201ENST00000267970 SS18L2Q9UHA2 77 aa13.71□□□□□ -0.21
TSPAN3-201ENST00000267970 MSRB2Q9Y3D2 182 aa13.71□□□□□ -0.21
TSPAN3-201ENST00000267970 KIAA2026Q5HYC2 2103 aa13.71□□□□□ -0.21
TSPAN3-201ENST00000267970 F8WEM9 126 aa13.71□□□□□ -0.21
TSPAN3-201ENST00000267970 POLR3KQ9Y2Y1 108 aaPredicted RBP13.71□□□□□ -0.21
TSPAN3-201ENST00000267970 IGHV3-38A0A0C4DH36 116 aa13.71□□□□□ -0.21
TSPAN3-201ENST00000267970 IGHV1-8P0DP01 117 aa13.71□□□□□ -0.21
TSPAN3-201ENST00000267970 H3BUX3 64 aa13.71□□□□□ -0.22
TSPAN3-201ENST00000267970 ANXA2RQ3ZCQ2 193 aa13.71□□□□□ -0.22
TSPAN3-201ENST00000267970 CLPSL1A2RUU4 121 aa13.71□□□□□ -0.22
TSPAN3-201ENST00000267970 PFN2P35080 140 aa13.71□□□□□ -0.22
TSPAN3-201ENST00000267970 KLK9Q9UKQ9 250 aa13.71□□□□□ -0.22
TSPAN3-201ENST00000267970 LRRK1Q38SD2 2015 aa13.7□□□□□ -0.22
TSPAN3-201ENST00000267970 H3BMM0 161 aa13.7□□□□□ -0.22
TSPAN3-201ENST00000267970 ARMS2P0C7Q2 107 aa13.7□□□□□ -0.22
TSPAN3-201ENST00000267970 RNASE6Q93091 150 aaKnown RBP13.7□□□□□ -0.22
TSPAN3-201ENST00000267970 UBE2WQ96B02 151 aa13.7□□□□□ -0.22
TSPAN3-201ENST00000267970 HAMPP81172 84 aa13.7□□□□□ -0.22
TSPAN3-201ENST00000267970 C9JQL5 133 aa13.7□□□□□ -0.22
TSPAN3-201ENST00000267970 PRIMA1Q86XR5 153 aa13.7□□□□□ -0.22
TSPAN3-201ENST00000267970 FLVCR1-AS1Q8TAF5 88 aa13.7□□□□□ -0.22
TSPAN3-201ENST00000267970 TRAV25A0A0B4J276 109 aa13.7□□□□□ -0.22
TSPAN3-201ENST00000267970 SLC25A48Q6ZT89 311 aaKnown RBP13.7□□□□□ -0.22
TSPAN3-201ENST00000267970 PI4KAP42356 2102 aa13.69□□□□□ -0.22
TSPAN3-201ENST00000267970 TIMM21Q9BVV7 248 aa13.69□□□□□ -0.22
TSPAN3-201ENST00000267970 RPRMLQ8N4K4 120 aa13.69□□□□□ -0.22
TSPAN3-201ENST00000267970 CRYGSP22914 178 aa13.69□□□□□ -0.22
TSPAN3-201ENST00000267970 CYYR1Q96J86 154 aa13.69□□□□□ -0.22
TSPAN3-201ENST00000267970 HS3ST6Q96QI5 342 aa13.69□□□□□ -0.22
TSPAN3-201ENST00000267970 RUSC1-AS1Q66K80 236 aa13.69□□□□□ -0.22
TSPAN3-201ENST00000267970 RNASE13Q5GAN3 156 aaKnown RBP13.68□□□□□ -0.22
TSPAN3-201ENST00000267970 IGKV1-16P04430 117 aa13.68□□□□□ -0.22
TSPAN3-201ENST00000267970 CFHR1Q03591 330 aa13.68□□□□□ -0.22
TSPAN3-201ENST00000267970 H0YJW9 148 aa13.68□□□□□ -0.22
TSPAN3-201ENST00000267970 HOXD3P31249 432 aaPredicted RBP13.68□□□□□ -0.22
TSPAN3-201ENST00000267970 GGNQ86UU5 652 aa13.68□□□□□ -0.22
TSPAN3-201ENST00000267970 A0A096LPF7 62 aa13.68□□□□□ -0.22
TSPAN3-201ENST00000267970 PLEKHB2Q96CS7 222 aa13.68□□□□□ -0.22
TSPAN3-201ENST00000267970 DOCK11Q5JSL3 2073 aa13.68□□□□□ -0.22
TSPAN3-201ENST00000267970 Q6ZRM9 215 aa13.68□□□□□ -0.22
TSPAN3-201ENST00000267970 LTBP4Q8N2S1 1624 aa13.67□□□□□ -0.22
TSPAN3-201ENST00000267970 WIPF3A6NGB9 483 aa13.67□□□□□ -0.22
TSPAN3-201ENST00000267970 RBMY1FQ15415 496 aaKnown RBP13.67□□□□□ -0.22
TSPAN3-201ENST00000267970 PARP14Q460N5 1801 aa13.67□□□□□ -0.22
TSPAN3-201ENST00000267970 COL11A2P13942 1736 aaPredicted RBP13.67□□□□□ -0.22
TSPAN3-201ENST00000267970 RPL36AP83881 106 aaKnown RBP13.67□□□□□ -0.22
TSPAN3-201ENST00000267970 NRN1LQ496H8 165 aa13.67□□□□□ -0.22
TSPAN3-201ENST00000267970 KLHL30-AS1Q8NEE0 82 aa13.67□□□□□ -0.22
TSPAN3-201ENST00000267970 RASL10AQ92737 203 aa13.67□□□□□ -0.22
TSPAN3-201ENST00000267970 RPL36ALQ969Q0 106 aaKnown RBP13.67□□□□□ -0.22
TSPAN3-201ENST00000267970 A0A1B0GWJ7 208 aa13.67□□□□□ -0.22
TSPAN3-201ENST00000267970 TRACP01848 142 aa13.67□□□□□ -0.22
TSPAN3-201ENST00000267970 NMSQ5H8A3 153 aa13.67□□□□□ -0.22
TSPAN3-201ENST00000267970 TMEM242Q9NWH2 141 aa13.67□□□□□ -0.22
TSPAN3-201ENST00000267970 PHF3Q92576 2039 aaKnown RBP13.66□□□□□ -0.22
TSPAN3-201ENST00000267970 TINCRA0A1B0GVN0 87 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms