RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 ATP5G2Q06055 141 aa17.37■□□□□ 0.37
SIX3-201ENST00000260653 ZNF343Q6P1L6 599 aa17.37■□□□□ 0.37
SIX3-201ENST00000260653 ELOVL1Q9BW60 279 aa17.37■□□□□ 0.37
SIX3-201ENST00000260653 MYO9AB2RTY4 2548 aa17.36■□□□□ 0.37
SIX3-201ENST00000260653 A0A087WWC5 75 aa17.36■□□□□ 0.37
SIX3-201ENST00000260653 PGPEP1LA6NFU8 196 aa17.36■□□□□ 0.37
SIX3-201ENST00000260653 B4DEV8 164 aa17.36■□□□□ 0.37
SIX3-201ENST00000260653 HOXA3O43365 443 aaPredicted RBP17.36■□□□□ 0.37
SIX3-201ENST00000260653 FAM223BA6NKX1 122 aa17.36■□□□□ 0.37
SIX3-201ENST00000260653 NBEAP1P0C6P0 100 aa17.36■□□□□ 0.37
SIX3-201ENST00000260653 TPPP2P59282 170 aa17.36■□□□□ 0.37
SIX3-201ENST00000260653 FAM223AQ8IWN6 122 aa17.36■□□□□ 0.37
SIX3-201ENST00000260653 IGHV3OR16-8A0A075B7F1 116 aa17.35■□□□□ 0.37
SIX3-201ENST00000260653 TRBV7-1A0A0A6YYK4 115 aa17.35■□□□□ 0.37
SIX3-201ENST00000260653 RANP62826 216 aaKnown RBP17.35■□□□□ 0.37
SIX3-201ENST00000260653 AURKAIP1Q9NWT8 199 aaPredicted RBP17.35■□□□□ 0.37
SIX3-201ENST00000260653 GNB4Q9HAV0 340 aa17.35■□□□□ 0.37
SIX3-201ENST00000260653 RNF212Q495C1 297 aa17.34■□□□□ 0.37
SIX3-201ENST00000260653 HSBP1L1C9JCN9 74 aa17.34■□□□□ 0.37
SIX3-201ENST00000260653 ZNF329Q86UD4 541 aa17.34■□□□□ 0.37
SIX3-201ENST00000260653 KLK15Q9H2R5 256 aa17.34■□□□□ 0.37
SIX3-201ENST00000260653 PRDM13Q9H4Q3 707 aa17.34■□□□□ 0.37
SIX3-201ENST00000260653 TUBA4BQ9H853 241 aa17.34■□□□□ 0.37
SIX3-201ENST00000260653 GAR1Q9NY12 217 aaKnown RBP17.34■□□□□ 0.37
SIX3-201ENST00000260653 TMEM14CQ9P0S9 112 aa17.34■□□□□ 0.37
SIX3-201ENST00000260653 COLCA2A8K830 154 aa17.33■□□□□ 0.36
SIX3-201ENST00000260653 TGOLN2O43493 480 aa17.33■□□□□ 0.36
SIX3-201ENST00000260653 KRTAP1-1Q07627 177 aa17.33■□□□□ 0.36
SIX3-201ENST00000260653 LINC01551Q86U37 167 aa17.33■□□□□ 0.36
SIX3-201ENST00000260653 LCNL1Q6ZST4 164 aa17.32■□□□□ 0.36
SIX3-201ENST00000260653 C2CD4CQ8TF44 421 aa17.32■□□□□ 0.36
SIX3-201ENST00000260653 ZNF586Q9NXT0 402 aa17.32■□□□□ 0.36
SIX3-201ENST00000260653 PF4V1P10720 104 aa17.32■□□□□ 0.36
SIX3-201ENST00000260653 MYCNOSP40205 109 aa17.32■□□□□ 0.36
SIX3-201ENST00000260653 CFHR3Q02985 330 aa17.32■□□□□ 0.36
SIX3-201ENST00000260653 PPP5D1E7EU14 171 aa17.31■□□□□ 0.36
SIX3-201ENST00000260653 H3BUA1 57 aa17.31■□□□□ 0.36
SIX3-201ENST00000260653 TOMM20LQ6UXN7 152 aa17.31■□□□□ 0.36
SIX3-201ENST00000260653 BPIFA4PQ86YQ2 179 aa17.31■□□□□ 0.36
SIX3-201ENST00000260653 IGLV1-40P01703 118 aa17.31■□□□□ 0.36
SIX3-201ENST00000260653 C15orf54Q8N8G6 183 aa17.31■□□□□ 0.36
SIX3-201ENST00000260653 C14orf144Q96I85 54 aa17.31■□□□□ 0.36
SIX3-201ENST00000260653 DUX5Q96PT3 197 aa17.31■□□□□ 0.36
SIX3-201ENST00000260653 ZFAND3Q9H8U3 227 aa17.31■□□□□ 0.36
SIX3-201ENST00000260653 BRI3O95415 125 aa17.3■□□□□ 0.36
SIX3-201ENST00000260653 HIST1H1EP10412 219 aaKnown RBP17.3■□□□□ 0.36
SIX3-201ENST00000260653 FAM24BQ8N5W8 94 aa17.3■□□□□ 0.36
SIX3-201ENST00000260653 SIGLECL1Q8N7X8 197 aa17.3■□□□□ 0.36
SIX3-201ENST00000260653 HNF1AP20823 631 aa17.3■□□□□ 0.36
SIX3-201ENST00000260653 URGCP-MRPS24S4R325 110 aa17.3■□□□□ 0.36
SIX3-201ENST00000260653 HELTA6NFD8 242 aa17.29■□□□□ 0.36
SIX3-201ENST00000260653 BMPR1BO00238 502 aa17.29■□□□□ 0.36
SIX3-201ENST00000260653 HIST1H2BAQ96A08 127 aa17.29■□□□□ 0.36
SIX3-201ENST00000260653 RABAC1Q9UI14 185 aa17.29■□□□□ 0.36
SIX3-201ENST00000260653 MRPS12O15235 138 aaKnown RBP17.29■□□□□ 0.36
SIX3-201ENST00000260653 GNG5P63218 68 aa17.29■□□□□ 0.36
SIX3-201ENST00000260653 S100A7AQ86SG5 101 aa17.29■□□□□ 0.36
SIX3-201ENST00000260653 OCC1Q8TAD7 63 aa17.29■□□□□ 0.36
SIX3-201ENST00000260653 Q9H3A6 140 aa17.29■□□□□ 0.36
SIX3-201ENST00000260653 ZNF580Q9UK33 172 aa17.29■□□□□ 0.36
SIX3-201ENST00000260653 PGPA6NDG6 321 aa17.28■□□□□ 0.36
SIX3-201ENST00000260653 TRBV12-3P01733 135 aa17.28■□□□□ 0.36
SIX3-201ENST00000260653 IGLC2P0DOY2 106 aa17.28■□□□□ 0.36
SIX3-201ENST00000260653 OR4F17Q8NGA8 305 aa17.28■□□□□ 0.36
SIX3-201ENST00000260653 LINC00479Q96M42 142 aa17.28■□□□□ 0.36
SIX3-201ENST00000260653 C17orf77Q96MU5 243 aa17.28■□□□□ 0.36
SIX3-201ENST00000260653 YPEL4Q96NS1 127 aa17.28■□□□□ 0.36
SIX3-201ENST00000260653 C9JCJ5 164 aa17.28■□□□□ 0.36
SIX3-201ENST00000260653 IGHV3-11P01762 117 aa17.28■□□□□ 0.36
SIX3-201ENST00000260653 CENPWQ5EE01 88 aa17.28■□□□□ 0.36
SIX3-201ENST00000260653 USMG5Q96IX5 58 aa17.28■□□□□ 0.36
SIX3-201ENST00000260653 PEX7O00628 323 aa17.27■□□□□ 0.36
SIX3-201ENST00000260653 MT-ND4LP03901 98 aa17.27■□□□□ 0.36
SIX3-201ENST00000260653 SLC25A5P05141 298 aaKnown RBP17.27■□□□□ 0.36
SIX3-201ENST00000260653 TMEM242Q9NWH2 141 aa17.27■□□□□ 0.36
SIX3-201ENST00000260653 RPL15P61313 204 aaKnown RBP17.27■□□□□ 0.36
SIX3-201ENST00000260653 C10orf99Q6UWK7 81 aa17.27■□□□□ 0.36
SIX3-201ENST00000260653 ATP6V0BQ99437 205 aa17.27■□□□□ 0.36
SIX3-201ENST00000260653 MTORP42345 2549 aa17.26■□□□□ 0.35
SIX3-201ENST00000260653 TRBV19A0A075B6N1 114 aa17.26■□□□□ 0.35
SIX3-201ENST00000260653 CLDN34H7C241 214 aa17.26■□□□□ 0.35
SIX3-201ENST00000260653 CD5LO43866 347 aa17.26■□□□□ 0.35
SIX3-201ENST00000260653 RAB9AP51151 201 aa17.26■□□□□ 0.35
SIX3-201ENST00000260653 PRSS22Q9GZN4 317 aa17.26■□□□□ 0.35
SIX3-201ENST00000260653 ZNF702PQ9H963 129 aa17.26■□□□□ 0.35
SIX3-201ENST00000260653 CXorf65A6NEN9 183 aa17.26■□□□□ 0.35
SIX3-201ENST00000260653 K7EN84 100 aa17.26■□□□□ 0.35
SIX3-201ENST00000260653 ARL3P36405 182 aa17.26■□□□□ 0.35
SIX3-201ENST00000260653 SRP14P37108 136 aaKnown RBP17.26■□□□□ 0.35
SIX3-201ENST00000260653 GNG4P50150 75 aa17.26■□□□□ 0.35
SIX3-201ENST00000260653 NPFFR1Q9GZQ6 430 aa17.26■□□□□ 0.35
SIX3-201ENST00000260653 CTDSP1Q9GZU7 261 aa17.26■□□□□ 0.35
SIX3-201ENST00000260653 EPDR1Q9UM22 224 aa17.26■□□□□ 0.35
SIX3-201ENST00000260653 RPH3ALQ9UNE2 315 aa17.26■□□□□ 0.35
SIX3-201ENST00000260653 CLPSL1A2RUU4 121 aa17.25■□□□□ 0.35
SIX3-201ENST00000260653 EXOC3-AS1Q8N2X6 119 aa17.25■□□□□ 0.35
SIX3-201ENST00000260653 TEX29Q8N6K0 151 aa17.25■□□□□ 0.35
SIX3-201ENST00000260653 SLC17A3O00476 420 aa17.25■□□□□ 0.35
SIX3-201ENST00000260653 ELOBQ15370 118 aa17.25■□□□□ 0.35
SIX3-201ENST00000260653 TRAV34A0A0B4J273 112 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms