RNA–Protein interactions for RNA: ENST00000254193.10

SNRPA1-201, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA1, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-201ENST00000254193 BAXQ07812 192 aa13.14□□□□□ -0.31
SNRPA1-201ENST00000254193 PXDC1Q5TGL8 231 aa13.14□□□□□ -0.31
SNRPA1-201ENST00000254193 MIC13Q5XKP0 118 aa13.14□□□□□ -0.31
SNRPA1-201ENST00000254193 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.14□□□□□ -0.31
SNRPA1-201ENST00000254193 C16orf92Q96LL3 132 aa13.14□□□□□ -0.31
SNRPA1-201ENST00000254193 RNF126Q9BV68 326 aa13.14□□□□□ -0.31
SNRPA1-201ENST00000254193 SLC25A31Q9H0C2 315 aa13.14□□□□□ -0.31
SNRPA1-201ENST00000254193 A0A0J9YWU9 116 aa13.13□□□□□ -0.31
SNRPA1-201ENST00000254193 H3BMM0 161 aa13.13□□□□□ -0.31
SNRPA1-201ENST00000254193 ISLRO14498 428 aa13.13□□□□□ -0.31
SNRPA1-201ENST00000254193 COX7A2P2O60397 106 aa13.13□□□□□ -0.31
SNRPA1-201ENST00000254193 C4BPBP20851 252 aa13.13□□□□□ -0.31
SNRPA1-201ENST00000254193 MEOX2P50222 304 aa13.13□□□□□ -0.31
SNRPA1-201ENST00000254193 ATP6V1FQ16864 119 aa13.13□□□□□ -0.31
SNRPA1-201ENST00000254193 GDF5OSQ5U4N7 250 aa13.13□□□□□ -0.31
SNRPA1-201ENST00000254193 MORN3Q6PF18 240 aaPredicted RBP13.13□□□□□ -0.31
SNRPA1-201ENST00000254193 OR5C1Q8NGR4 320 aa13.13□□□□□ -0.31
SNRPA1-201ENST00000254193 GATAD1Q8WUU5 269 aa13.13□□□□□ -0.31
SNRPA1-201ENST00000254193 TMEM37Q8WXS4 190 aa13.13□□□□□ -0.31
SNRPA1-201ENST00000254193 C20orf173Q96LM9 149 aa13.13□□□□□ -0.31
SNRPA1-201ENST00000254193 BOLA1Q9Y3E2 137 aa13.13□□□□□ -0.31
SNRPA1-201ENST00000254193 MPC2O95563 127 aa13.12□□□□□ -0.31
SNRPA1-201ENST00000254193 SPP1P10451 314 aa13.12□□□□□ -0.31
SNRPA1-201ENST00000254193 RPL7P18124 248 aaKnown RBP13.12□□□□□ -0.31
SNRPA1-201ENST00000254193 ATF4P18848 351 aaPredicted RBP13.12□□□□□ -0.31
SNRPA1-201ENST00000254193 CXCL3P19876 107 aa13.12□□□□□ -0.31
SNRPA1-201ENST00000254193 FGF7P21781 194 aa13.12□□□□□ -0.31
SNRPA1-201ENST00000254193 PRR20EP86478 221 aa13.12□□□□□ -0.31
SNRPA1-201ENST00000254193 PRR20CP86479 221 aa13.12□□□□□ -0.31
SNRPA1-201ENST00000254193 PRR20DP86480 221 aa13.12□□□□□ -0.31
SNRPA1-201ENST00000254193 PRR20BP86481 221 aa13.12□□□□□ -0.31
SNRPA1-201ENST00000254193 PRR20AP86496 221 aa13.12□□□□□ -0.31
SNRPA1-201ENST00000254193 FGL1Q08830 312 aa13.12□□□□□ -0.31
SNRPA1-201ENST00000254193 IGFL4Q6B9Z1 124 aa13.12□□□□□ -0.31
SNRPA1-201ENST00000254193 LINC00305Q7Z4B0 112 aa13.12□□□□□ -0.31
SNRPA1-201ENST00000254193 S100A7AQ86SG5 101 aa13.12□□□□□ -0.31
SNRPA1-201ENST00000254193 OR11H2Q8NH07 326 aa13.12□□□□□ -0.31
SNRPA1-201ENST00000254193 RARRES2Q99969 163 aa13.12□□□□□ -0.31
SNRPA1-201ENST00000254193 F6UB75 175 aa13.11□□□□□ -0.31
SNRPA1-201ENST00000254193 IGKV3-20P01619 116 aa13.11□□□□□ -0.31
SNRPA1-201ENST00000254193 HLA-DRB4P13762 266 aa13.11□□□□□ -0.31
SNRPA1-201ENST00000254193 CLINT1Q14677 625 aa13.11□□□□□ -0.31
SNRPA1-201ENST00000254193 OPCMLQ14982 345 aa13.11□□□□□ -0.31
SNRPA1-201ENST00000254193 SAMD13Q5VXD3 122 aa13.11□□□□□ -0.31
SNRPA1-201ENST00000254193 MORN5Q5VZ52 161 aa13.11□□□□□ -0.31
SNRPA1-201ENST00000254193 C10orf113Q5VZT2 155 aa13.11□□□□□ -0.31
SNRPA1-201ENST00000254193 THAP6Q8TBB0 222 aa13.11□□□□□ -0.31
SNRPA1-201ENST00000254193 HLA-DRB4X5D2U9 266 aa13.11□□□□□ -0.31
SNRPA1-201ENST00000254193 TRAV8-2A0A0B4J237 113 aa13.1□□□□□ -0.31
SNRPA1-201ENST00000254193 RPL29P47914 159 aaKnown RBP13.1□□□□□ -0.31
SNRPA1-201ENST00000254193 FOXI2Q6ZQN5 318 aa13.1□□□□□ -0.31
SNRPA1-201ENST00000254193 Q6ZRG5 221 aa13.1□□□□□ -0.31
SNRPA1-201ENST00000254193 SAV1Q9H4B6 383 aaPredicted RBP13.1□□□□□ -0.31
SNRPA1-201ENST00000254193 DNAJC4Q9NNZ3 241 aa13.1□□□□□ -0.31
SNRPA1-201ENST00000254193 SLC39A9Q9NUM3 307 aa13.1□□□□□ -0.31
SNRPA1-201ENST00000254193 CLEC5AQ9NY25 188 aa13.1□□□□□ -0.31
SNRPA1-201ENST00000254193 ELOA3CA0A087WX78 387 aaPredicted RBP13.09□□□□□ -0.31
SNRPA1-201ENST00000254193 MRPS12O15235 138 aaKnown RBP13.09□□□□□ -0.31
SNRPA1-201ENST00000254193 SNRPCP09234 159 aaKnown RBP13.09□□□□□ -0.31
SNRPA1-201ENST00000254193 PET100P0DJ07 73 aa13.09□□□□□ -0.31
SNRPA1-201ENST00000254193 B2MP61769 119 aa13.09□□□□□ -0.31
SNRPA1-201ENST00000254193 FCN2Q15485 313 aa13.09□□□□□ -0.31
SNRPA1-201ENST00000254193 RNF182Q8N6D2 247 aa13.09□□□□□ -0.31
SNRPA1-201ENST00000254193 CHAC2Q8WUX2 184 aa13.09□□□□□ -0.31
SNRPA1-201ENST00000254193 MED28Q9H204 178 aa13.09□□□□□ -0.31
SNRPA1-201ENST00000254193 MBD2Q9UBB5 411 aa13.09□□□□□ -0.31
SNRPA1-201ENST00000254193 PXMP4Q9Y6I8 212 aa13.09□□□□□ -0.31
SNRPA1-201ENST00000254193 TRAV5A0A0B4J249 113 aa13.08□□□□□ -0.32
SNRPA1-201ENST00000254193 TMEM41BQ5BJD5 291 aa13.08□□□□□ -0.32
SNRPA1-201ENST00000254193 EBLN2Q6P2I7 272 aa13.08□□□□□ -0.32
SNRPA1-201ENST00000254193 OR11H7Q8NGC8 314 aa13.08□□□□□ -0.32
SNRPA1-201ENST00000254193 OR4B1Q8NGF8 309 aa13.08□□□□□ -0.32
SNRPA1-201ENST00000254193 IL17DQ8TAD2 202 aa13.08□□□□□ -0.32
SNRPA1-201ENST00000254193 NPCDR1Q9BY65 106 aa13.08□□□□□ -0.32
SNRPA1-201ENST00000254193 RPRMQ9NS64 109 aa13.08□□□□□ -0.32
SNRPA1-201ENST00000254193 RNF24Q9Y225 148 aa13.08□□□□□ -0.32
SNRPA1-201ENST00000254193 A0A087X0K7 114 aa13.07□□□□□ -0.32
SNRPA1-201ENST00000254193 A0A0J9YX75 114 aa13.07□□□□□ -0.32
SNRPA1-201ENST00000254193 MPDU1O75352 247 aa13.07□□□□□ -0.32
SNRPA1-201ENST00000254193 FXYD7P58549 80 aa13.07□□□□□ -0.32
SNRPA1-201ENST00000254193 NUTF2P61970 127 aaKnown RBP13.07□□□□□ -0.32
SNRPA1-201ENST00000254193 RGS21Q2M5E4 152 aa13.07□□□□□ -0.32
SNRPA1-201ENST00000254193 FAM78BQ5VT40 261 aa13.07□□□□□ -0.32
SNRPA1-201ENST00000254193 CSNK1G2-AS1Q8NCQ2 148 aa13.07□□□□□ -0.32
SNRPA1-201ENST00000254193 OR1L4Q8NGR5 311 aa13.07□□□□□ -0.32
SNRPA1-201ENST00000254193 XCL2Q9UBD3 114 aa13.07□□□□□ -0.32
SNRPA1-201ENST00000254193 HSPB11Q9Y547 144 aa13.07□□□□□ -0.32
SNRPA1-201ENST00000254193 H3BTX0 84 aa13.06□□□□□ -0.32
SNRPA1-201ENST00000254193 DEFB4AO15263 64 aa13.06□□□□□ -0.32
SNRPA1-201ENST00000254193 HLA-DMBP28068 263 aa13.06□□□□□ -0.32
SNRPA1-201ENST00000254193 RPL12P30050 165 aaKnown RBP13.06□□□□□ -0.32
SNRPA1-201ENST00000254193 GCSAMLQ5JQS6 135 aa13.06□□□□□ -0.32
SNRPA1-201ENST00000254193 BPIFA4PQ86YQ2 179 aa13.06□□□□□ -0.32
SNRPA1-201ENST00000254193 LRRC20Q8TCA0 184 aa13.06□□□□□ -0.32
SNRPA1-201ENST00000254193 PFDN5Q99471 154 aa13.06□□□□□ -0.32
SNRPA1-201ENST00000254193 PRB4P10163 310 aaPredicted RBP13.05□□□□□ -0.32
SNRPA1-201ENST00000254193 SPATA31B1PQ5VZV4 182 aa13.05□□□□□ -0.32
SNRPA1-201ENST00000254193 SMIM3Q9BZL3 60 aa13.05□□□□□ -0.32
SNRPA1-201ENST00000254193 WDR61Q9GZS3 305 aaKnown RBP13.05□□□□□ -0.32
SNRPA1-201ENST00000254193 ZNF705DP0CH99 300 aaPredicted RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms