RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 SH3BGRL3Q9H299 93 aa10.59□□□□□ -0.71
VPS25-201ENST00000253794 SLC25A32Q9H2D1 315 aa10.59□□□□□ -0.71
VPS25-201ENST00000253794 ZNF256Q9Y2P7 627 aaPredicted RBP10.59□□□□□ -0.71
VPS25-201ENST00000253794 RFNGQ9Y644 331 aa10.59□□□□□ -0.71
VPS25-201ENST00000253794 SEC11BP0C7V7 166 aa10.58□□□□□ -0.72
VPS25-201ENST00000253794 TPT1P13693 172 aaKnown RBP10.58□□□□□ -0.72
VPS25-201ENST00000253794 RPL7P18124 248 aaKnown RBP10.58□□□□□ -0.72
VPS25-201ENST00000253794 C4BPBP20851 252 aa10.58□□□□□ -0.72
VPS25-201ENST00000253794 ACOT6Q3I5F7 207 aaPredicted RBP10.58□□□□□ -0.72
VPS25-201ENST00000253794 MORN5Q5VZ52 161 aa10.58□□□□□ -0.72
VPS25-201ENST00000253794 SLC51BQ86UW2 128 aa10.58□□□□□ -0.72
VPS25-201ENST00000253794 BAP18Q8IXM2 172 aa10.58□□□□□ -0.72
VPS25-201ENST00000253794 OR8I2Q8N0Y5 310 aa10.58□□□□□ -0.72
VPS25-201ENST00000253794 DCANP1Q8TF63 244 aa10.58□□□□□ -0.72
VPS25-201ENST00000253794 C17orf77Q96MU5 243 aa10.58□□□□□ -0.72
VPS25-201ENST00000253794 SEPSECSQ9HD40 501 aaKnown RBP10.58□□□□□ -0.72
VPS25-201ENST00000253794 FUT9Q9Y231 359 aa10.58□□□□□ -0.72
VPS25-201ENST00000253794 A0A087X0K7 114 aa10.57□□□□□ -0.72
VPS25-201ENST00000253794 OR4C46A6NHA9 309 aa10.57□□□□□ -0.72
VPS25-201ENST00000253794 GP9P14770 177 aa10.57□□□□□ -0.72
VPS25-201ENST00000253794 GALR1P47211 349 aa10.57□□□□□ -0.72
VPS25-201ENST00000253794 FAM78BQ5VT40 261 aa10.57□□□□□ -0.72
VPS25-201ENST00000253794 FAM110AQ9BQ89 295 aa10.57□□□□□ -0.72
VPS25-201ENST00000253794 MS4A6AQ9H2W1 248 aa10.57□□□□□ -0.72
VPS25-201ENST00000253794 NRN1Q9NPD7 142 aa10.57□□□□□ -0.72
VPS25-201ENST00000253794 TMEM14CQ9P0S9 112 aa10.57□□□□□ -0.72
VPS25-201ENST00000253794 SMAD5-AS1Q9Y6J3 95 aa10.57□□□□□ -0.72
VPS25-201ENST00000253794 MEGF8Q7Z7M0 2845 aa10.57□□□□□ -0.72
VPS25-201ENST00000253794 MEOX2P50222 304 aa10.56□□□□□ -0.72
VPS25-201ENST00000253794 RAB2AP61019 212 aa10.56□□□□□ -0.72
VPS25-201ENST00000253794 RHOBP62745 196 aa10.56□□□□□ -0.72
VPS25-201ENST00000253794 PAFAH1B2P68402 229 aa10.56□□□□□ -0.72
VPS25-201ENST00000253794 SAMD13Q5VXD3 122 aa10.56□□□□□ -0.72
VPS25-201ENST00000253794 LEMD1Q68G75 181 aa10.56□□□□□ -0.72
VPS25-201ENST00000253794 BPIFA4PQ86YQ2 179 aa10.56□□□□□ -0.72
VPS25-201ENST00000253794 RPP25LQ8N5L8 163 aaKnown RBP10.56□□□□□ -0.72
VPS25-201ENST00000253794 FAM167A-AS1Q96KT0 104 aa10.56□□□□□ -0.72
VPS25-201ENST00000253794 SLC25A22Q9H936 323 aa10.56□□□□□ -0.72
VPS25-201ENST00000253794 K7EQG2 157 aa10.55□□□□□ -0.72
VPS25-201ENST00000253794 SOCS3O14543 225 aa10.55□□□□□ -0.72
VPS25-201ENST00000253794 IGLC2P0DOY2 106 aa10.55□□□□□ -0.72
VPS25-201ENST00000253794 NKX2-5P52952 324 aaPredicted RBP10.55□□□□□ -0.72
VPS25-201ENST00000253794 TMEM41BQ5BJD5 291 aa10.55□□□□□ -0.72
VPS25-201ENST00000253794 SPATA31B1PQ5VZV4 182 aa10.55□□□□□ -0.72
VPS25-201ENST00000253794 STXBP6Q8NFX7 210 aa10.55□□□□□ -0.72
VPS25-201ENST00000253794 OR10G4Q8NGN3 311 aa10.55□□□□□ -0.72
VPS25-201ENST00000253794 OR10G9Q8NGN4 311 aa10.55□□□□□ -0.72
VPS25-201ENST00000253794 OR10G7Q8NGN6 311 aa10.55□□□□□ -0.72
VPS25-201ENST00000253794 SLC25A2Q9BXI2 301 aa10.55□□□□□ -0.72
VPS25-201ENST00000253794 RPRMQ9NS64 109 aa10.55□□□□□ -0.72
VPS25-201ENST00000253794 SELENOKQ9Y6D0 94 aa10.55□□□□□ -0.72
VPS25-201ENST00000253794 SORL1Q92673 2214 aa10.55□□□□□ -0.72
VPS25-201ENST00000253794 TRAV5A0A0B4J249 113 aa10.54□□□□□ -0.72
VPS25-201ENST00000253794 UMAD1C9J7I0 102 aa10.54□□□□□ -0.72
VPS25-201ENST00000253794 GUCA2BQ16661 112 aa10.54□□□□□ -0.72
VPS25-201ENST00000253794 EIF5AL1Q6IS14 154 aaKnown RBP10.54□□□□□ -0.72
VPS25-201ENST00000253794 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.54□□□□□ -0.72
VPS25-201ENST00000253794 MIR17HGQ75NE6 70 aa10.54□□□□□ -0.72
VPS25-201ENST00000253794 HRH4Q9H3N8 390 aa10.54□□□□□ -0.72
VPS25-201ENST00000253794 C19orf73Q9NVV2 129 aa10.54□□□□□ -0.72
VPS25-201ENST00000253794 FBN3Q75N90 2809 aa10.53□□□□□ -0.72
VPS25-201ENST00000253794 BOLA2-SMG1P6H3BVE0 249 aa10.53□□□□□ -0.72
VPS25-201ENST00000253794 CDC34P49427 236 aaPredicted RBP10.53□□□□□ -0.72
VPS25-201ENST00000253794 CMC4P56277 68 aaPredicted RBP10.53□□□□□ -0.72
VPS25-201ENST00000253794 TAS2R45P59539 299 aa10.53□□□□□ -0.72
VPS25-201ENST00000253794 RPL11P62913 178 aaKnown RBP10.53□□□□□ -0.72
VPS25-201ENST00000253794 GUK1Q16774 197 aa10.53□□□□□ -0.72
VPS25-201ENST00000253794 KHDC3LQ587J8 217 aa10.53□□□□□ -0.72
VPS25-201ENST00000253794 Q8N1Y9 231 aa10.53□□□□□ -0.72
VPS25-201ENST00000253794 PHYHIPLQ96FC7 376 aa10.53□□□□□ -0.72
VPS25-201ENST00000253794 PLA2G2EQ9NZK7 142 aa10.53□□□□□ -0.72
VPS25-201ENST00000253794 DNASE2O00115 360 aaPredicted RBP10.52□□□□□ -0.73
VPS25-201ENST00000253794 ISLRO14498 428 aa10.52□□□□□ -0.73
VPS25-201ENST00000253794 ZNF253O75346 499 aa10.52□□□□□ -0.73
VPS25-201ENST00000253794 STAG3L2P0CL84 134 aa10.52□□□□□ -0.73
VPS25-201ENST00000253794 STAG3L3P0CL85 134 aa10.52□□□□□ -0.73
VPS25-201ENST00000253794 HIST1H1EP10412 219 aaKnown RBP10.52□□□□□ -0.73
VPS25-201ENST00000253794 ATF4P18848 351 aaPredicted RBP10.52□□□□□ -0.73
VPS25-201ENST00000253794 PDE6HQ13956 83 aa10.52□□□□□ -0.73
VPS25-201ENST00000253794 ODF3L2Q3SX64 289 aa10.52□□□□□ -0.73
VPS25-201ENST00000253794 AKR1C8PQ5T2L2 129 aa10.52□□□□□ -0.73
VPS25-201ENST00000253794 FAM122CQ6P4D5 195 aa10.52□□□□□ -0.73
VPS25-201ENST00000253794 LCN15Q6UWW0 184 aa10.52□□□□□ -0.73
VPS25-201ENST00000253794 DPPA3Q6W0C5 159 aa10.52□□□□□ -0.73
VPS25-201ENST00000253794 PQLC2Q6ZP29 291 aa10.52□□□□□ -0.73
VPS25-201ENST00000253794 GTSCR1Q86UQ5 136 aa10.52□□□□□ -0.73
VPS25-201ENST00000253794 GBGT1Q8N5D6 347 aa10.52□□□□□ -0.73
VPS25-201ENST00000253794 SAT2Q96F10 170 aaPredicted RBP10.52□□□□□ -0.73
VPS25-201ENST00000253794 ZNF503Q96F45 646 aa10.52□□□□□ -0.73
VPS25-201ENST00000253794 PRR25Q96S07 402 aa10.52□□□□□ -0.73
VPS25-201ENST00000253794 ACTR3CQ9C0K3 210 aaPredicted RBP10.52□□□□□ -0.73
VPS25-201ENST00000253794 AURKAIP1Q9NWT8 199 aaPredicted RBP10.52□□□□□ -0.73
VPS25-201ENST00000253794 IGKV3-7A0A075B6H7 116 aa10.51□□□□□ -0.73
VPS25-201ENST00000253794 CTXND1A0A1B0GTU2 59 aa10.51□□□□□ -0.73
VPS25-201ENST00000253794 A0A1W2PPV4 95 aa10.51□□□□□ -0.73
VPS25-201ENST00000253794 H3BQ15 152 aa10.51□□□□□ -0.73
VPS25-201ENST00000253794 CD7P09564 240 aa10.51□□□□□ -0.73
VPS25-201ENST00000253794 PSMB3P49720 205 aa10.51□□□□□ -0.73
VPS25-201ENST00000253794 ZNF726P1Q15940 193 aa10.51□□□□□ -0.73
VPS25-201ENST00000253794 SUN5Q8TC36 379 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms