RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 PPP1R27Q86WC6 154 aa3.74□□□□□ -1.81
VPS13C-201ENST00000249837 PHLDA3Q9Y5J5 127 aa3.74□□□□□ -1.81
VPS13C-201ENST00000249837 TRAV30A0A087WSZ9 112 aa3.74□□□□□ -1.81
VPS13C-201ENST00000249837 KLRD1Q13241 179 aa3.74□□□□□ -1.81
VPS13C-201ENST00000249837 PET117Q6UWS5 81 aa3.74□□□□□ -1.81
VPS13C-201ENST00000249837 CENPVQ7Z7K6 275 aaPredicted RBP3.74□□□□□ -1.81
VPS13C-201ENST00000249837 FAM57AQ8TBR7 257 aa3.74□□□□□ -1.81
VPS13C-201ENST00000249837 PMS2P5A8MQ11 134 aa3.74□□□□□ -1.81
VPS13C-201ENST00000249837 TMEM178BH3BS89 294 aa3.74□□□□□ -1.81
VPS13C-201ENST00000249837 H3BVH4 76 aa3.74□□□□□ -1.81
VPS13C-201ENST00000249837 SAPCD1Q5SSQ6 148 aa3.74□□□□□ -1.81
VPS13C-201ENST00000249837 ARPC1AQ92747 370 aa3.74□□□□□ -1.81
VPS13C-201ENST00000249837 ST20Q9HBF5 79 aa3.74□□□□□ -1.81
VPS13C-201ENST00000249837 SFTA2Q6UW10 78 aa3.74□□□□□ -1.81
VPS13C-201ENST00000249837 NEUROG1Q92886 237 aa3.74□□□□□ -1.81
VPS13C-201ENST00000249837 NPIPB5A8MRT5 1133 aa3.74□□□□□ -1.81
VPS13C-201ENST00000249837 IGKV3-15P01624 115 aa3.74□□□□□ -1.81
VPS13C-201ENST00000249837 YPEL3P61236 119 aaPredicted RBP3.74□□□□□ -1.81
VPS13C-201ENST00000249837 PYGO2Q9BRQ0 406 aa3.74□□□□□ -1.81
VPS13C-201ENST00000249837 CHODLQ9H9P2 273 aa3.74□□□□□ -1.81
VPS13C-201ENST00000249837 ZNF257Q9Y2Q1 563 aa3.74□□□□□ -1.81
VPS13C-201ENST00000249837 SYS1-DBNDD2H3BUS1 97 aa3.74□□□□□ -1.81
VPS13C-201ENST00000249837 IGLV2-14P01704 120 aa3.74□□□□□ -1.81
VPS13C-201ENST00000249837 CNTFRP26992 372 aa3.74□□□□□ -1.81
VPS13C-201ENST00000249837 ADIPOQQ15848 244 aa3.74□□□□□ -1.81
VPS13C-201ENST00000249837 ODF3L1Q8IXM7 274 aa3.74□□□□□ -1.81
VPS13C-201ENST00000249837 RNF125Q96EQ8 232 aa3.74□□□□□ -1.81
VPS13C-201ENST00000249837 CIDEAO60543 219 aa3.74□□□□□ -1.81
VPS13C-201ENST00000249837 OR10J3Q5JRS4 329 aa3.74□□□□□ -1.81
VPS13C-201ENST00000249837 TRGV9Q99603 122 aa3.74□□□□□ -1.81
VPS13C-201ENST00000249837 SIGLEC9Q9Y336 463 aa3.74□□□□□ -1.81
VPS13C-201ENST00000249837 FER1L6-AS1Q8NA97 138 aa3.74□□□□□ -1.81
VPS13C-201ENST00000249837 OR1N2Q8NGR9 330 aa3.74□□□□□ -1.81
VPS13C-201ENST00000249837 NBR2O15453 112 aa3.73□□□□□ -1.81
VPS13C-201ENST00000249837 TRGV3P03979 118 aa3.73□□□□□ -1.81
VPS13C-201ENST00000249837 SLAQ13239 276 aa3.73□□□□□ -1.81
VPS13C-201ENST00000249837 ACANP16112 2415 aa3.73□□□□□ -1.81
VPS13C-201ENST00000249837 IGFL4Q6B9Z1 124 aa3.73□□□□□ -1.81
VPS13C-201ENST00000249837 C18orf32Q8TCD1 76 aa3.73□□□□□ -1.81
VPS13C-201ENST00000249837 ORAOV1Q8WV07 137 aa3.73□□□□□ -1.81
VPS13C-201ENST00000249837 DPF1Q92782 380 aa3.73□□□□□ -1.81
VPS13C-201ENST00000249837 SOX21Q9Y651 276 aaPredicted RBP3.73□□□□□ -1.81
VPS13C-201ENST00000249837 TIMM23O14925 209 aa3.73□□□□□ -1.81
VPS13C-201ENST00000249837 EEF1AKMT3Q96AZ1 226 aa3.73□□□□□ -1.81
VPS13C-201ENST00000249837 ATP5G2Q06055 141 aa3.73□□□□□ -1.81
VPS13C-201ENST00000249837 UBE2V1Q13404 147 aa3.73□□□□□ -1.81
VPS13C-201ENST00000249837 LINC00173Q6ZV60 143 aa3.73□□□□□ -1.81
VPS13C-201ENST00000249837 PEF1Q9UBV8 284 aaKnown RBP3.73□□□□□ -1.81
VPS13C-201ENST00000249837 TOMM40O96008 361 aa3.73□□□□□ -1.81
VPS13C-201ENST00000249837 IFI27P40305 119 aaPredicted RBP3.73□□□□□ -1.81
VPS13C-201ENST00000249837 Q8TAT8 98 aa3.73□□□□□ -1.81
VPS13C-201ENST00000249837 MAJINQ3KP22 176 aa3.73□□□□□ -1.81
VPS13C-201ENST00000249837 TMEM14BQ9NUH8 114 aa3.73□□□□□ -1.81
VPS13C-201ENST00000249837 H3BUT2 72 aa3.73□□□□□ -1.81
VPS13C-201ENST00000249837 WT1-ASQ06250 92 aa3.73□□□□□ -1.81
VPS13C-201ENST00000249837 TCRAP04437 139 aa3.73□□□□□ -1.81
VPS13C-201ENST00000249837 APOBEC3AP31941 199 aaPredicted RBP3.73□□□□□ -1.81
VPS13C-201ENST00000249837 TMPRSS3P57727 454 aa3.73□□□□□ -1.81
VPS13C-201ENST00000249837 TEX43Q6ZNM6 134 aa3.73□□□□□ -1.81
VPS13C-201ENST00000249837 GTSCR1Q86UQ5 136 aa3.73□□□□□ -1.81
VPS13C-201ENST00000249837 Q8TCH9 128 aa3.73□□□□□ -1.81
VPS13C-201ENST00000249837 C11orf52Q96A22 123 aa3.73□□□□□ -1.81
VPS13C-201ENST00000249837 OR11H12B2RN74 326 aa3.73□□□□□ -1.81
VPS13C-201ENST00000249837 OR11H1Q8NG94 326 aa3.73□□□□□ -1.81
VPS13C-201ENST00000249837 OR11H2Q8NH07 326 aa3.73□□□□□ -1.81
VPS13C-201ENST00000249837 SLC25A39Q9BZJ4 359 aaPredicted RBP3.73□□□□□ -1.81
VPS13C-201ENST00000249837 MEGF9Q9H1U4 602 aa3.73□□□□□ -1.81
VPS13C-201ENST00000249837 IGLC2P0DOY2 106 aa3.73□□□□□ -1.81
VPS13C-201ENST00000249837 IGLC3P0DOY3 106 aa3.73□□□□□ -1.81
VPS13C-201ENST00000249837 SRD5A1P18405 259 aa3.73□□□□□ -1.81
VPS13C-201ENST00000249837 HIST1H1AQ02539 215 aaPredicted RBP3.73□□□□□ -1.81
VPS13C-201ENST00000249837 DIAPH2-AS1Q14236 149 aa3.73□□□□□ -1.81
VPS13C-201ENST00000249837 CHCHD1Q96BP2 118 aaKnown RBP3.73□□□□□ -1.81
VPS13C-201ENST00000249837 SLC25A2Q9BXI2 301 aa3.73□□□□□ -1.81
VPS13C-201ENST00000249837 A0A1B0GW15 77 aa3.73□□□□□ -1.81
VPS13C-201ENST00000249837 FNDC10F2Z333 226 aa3.73□□□□□ -1.81
VPS13C-201ENST00000249837 IGHG3P01860 377 aa3.73□□□□□ -1.81
VPS13C-201ENST00000249837 UTF1Q5T230 341 aa3.73□□□□□ -1.81
VPS13C-201ENST00000249837 ATP5L2Q7Z4Y8 100 aa3.73□□□□□ -1.81
VPS13C-201ENST00000249837 ZNF295-AS1Q8N0V1 137 aa3.73□□□□□ -1.81
VPS13C-201ENST00000249837 C5orf30Q96GV9 206 aa3.73□□□□□ -1.81
VPS13C-201ENST00000249837 A0A0G2JNJ9 132 aa3.72□□□□□ -1.81
VPS13C-201ENST00000249837 DLX6P56179 175 aa3.72□□□□□ -1.81
VPS13C-201ENST00000249837 RHOGP84095 191 aa3.72□□□□□ -1.81
VPS13C-201ENST00000249837 VWC2Q2TAL6 325 aa3.72□□□□□ -1.81
VPS13C-201ENST00000249837 TPTE2P1Q5T6R2 138 aa3.72□□□□□ -1.81
VPS13C-201ENST00000249837 Q9UFV3 132 aa3.72□□□□□ -1.81
VPS13C-201ENST00000249837 COL8A2P25067 703 aa3.72□□□□□ -1.81
VPS13C-201ENST00000249837 NDUFA4L2Q9NRX3 87 aa3.72□□□□□ -1.81
VPS13C-201ENST00000249837 NHP2Q9NX24 153 aaKnown RBP3.72□□□□□ -1.81
VPS13C-201ENST00000249837 COL5A1P20908 1838 aaPredicted RBP3.72□□□□□ -1.81
VPS13C-201ENST00000249837 IGHV3-11P01762 117 aa3.72□□□□□ -1.81
VPS13C-201ENST00000249837 ABHD17AQ96GS6 310 aa3.72□□□□□ -1.81
VPS13C-201ENST00000249837 BEX4Q9NWD9 120 aaPredicted RBP3.72□□□□□ -1.81
VPS13C-201ENST00000249837 RNASE4P34096 147 aaKnown RBP3.72□□□□□ -1.81
VPS13C-201ENST00000249837 LYZL1Q6UWQ5 148 aa3.72□□□□□ -1.81
VPS13C-201ENST00000249837 RCHY1Q96PM5 261 aa3.72□□□□□ -1.81
VPS13C-201ENST00000249837 SPCS1Q9Y6A9 102 aa3.72□□□□□ -1.81
VPS13C-201ENST00000249837 A0A1B0GWB2 263 aa3.72□□□□□ -1.81
VPS13C-201ENST00000249837 APOMO95445 188 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms