RNA–Protein interactions for RNA: ENST00000248089.7

HCFC1R1-201, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene HCFC1R1, Length 965 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-201ENST00000248089 GPR82Q96P67 336 aa15.34■□□□□ 0.05
HCFC1R1-201ENST00000248089 PTTG2Q9NZH5 202 aa15.34■□□□□ 0.05
HCFC1R1-201ENST00000248089 X6R8D5 127 aa15.34■□□□□ 0.05
HCFC1R1-201ENST00000248089 F6UB75 175 aa15.33■□□□□ 0.04
HCFC1R1-201ENST00000248089 UPK1BO75841 260 aa15.33■□□□□ 0.04
HCFC1R1-201ENST00000248089 RBMY1A1P0DJD3 496 aaKnown RBP15.33■□□□□ 0.04
HCFC1R1-201ENST00000248089 RBMY1CP0DJD4 496 aa15.33■□□□□ 0.04
HCFC1R1-201ENST00000248089 FGL1Q08830 312 aa15.33■□□□□ 0.04
HCFC1R1-201ENST00000248089 RBMY1FQ15415 496 aaKnown RBP15.33■□□□□ 0.04
HCFC1R1-201ENST00000248089 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.33■□□□□ 0.04
HCFC1R1-201ENST00000248089 LINC00476Q8WZB0 136 aa15.33■□□□□ 0.04
HCFC1R1-201ENST00000248089 UHRF2Q96PU4 802 aa15.33■□□□□ 0.04
HCFC1R1-201ENST00000248089 SHANK2-AS3Q9BTD1 123 aa15.33■□□□□ 0.04
HCFC1R1-201ENST00000248089 ARL6Q9H0F7 186 aa15.33■□□□□ 0.04
HCFC1R1-201ENST00000248089 EBLN2Q6P2I7 272 aa15.32■□□□□ 0.04
HCFC1R1-201ENST00000248089 C20orf173Q96LM9 149 aa15.32■□□□□ 0.04
HCFC1R1-201ENST00000248089 RPRMQ9NS64 109 aa15.32■□□□□ 0.04
HCFC1R1-201ENST00000248089 HYDINQ4G0P3 5121 aa15.31■□□□□ 0.04
HCFC1R1-201ENST00000248089 GOSR2O14653 212 aa15.31■□□□□ 0.04
HCFC1R1-201ENST00000248089 CST7O76096 145 aa15.31■□□□□ 0.04
HCFC1R1-201ENST00000248089 LY6G6CO95867 125 aa15.31■□□□□ 0.04
HCFC1R1-201ENST00000248089 PVALBP20472 110 aaPredicted RBP15.31■□□□□ 0.04
HCFC1R1-201ENST00000248089 ZNF546Q86UE3 836 aa15.31■□□□□ 0.04
HCFC1R1-201ENST00000248089 C17orf77Q96MU5 243 aa15.31■□□□□ 0.04
HCFC1R1-201ENST00000248089 GGACTQ9BVM4 153 aa15.31■□□□□ 0.04
HCFC1R1-201ENST00000248089 AGPAT2O15120 278 aa15.3■□□□□ 0.04
HCFC1R1-201ENST00000248089 DEDDO75618 318 aa15.3■□□□□ 0.04
HCFC1R1-201ENST00000248089 PLP1P60201 277 aa15.3■□□□□ 0.04
HCFC1R1-201ENST00000248089 FAM78BQ5VT40 261 aa15.3■□□□□ 0.04
HCFC1R1-201ENST00000248089 IGFL4Q6B9Z1 124 aa15.3■□□□□ 0.04
HCFC1R1-201ENST00000248089 FAM24AA6NFZ4 105 aa15.29■□□□□ 0.04
HCFC1R1-201ENST00000248089 RPL7P18124 248 aaKnown RBP15.29■□□□□ 0.04
HCFC1R1-201ENST00000248089 SPATA31B1PQ5VZV4 182 aa15.29■□□□□ 0.04
HCFC1R1-201ENST00000248089 S100A7AQ86SG5 101 aa15.29■□□□□ 0.04
HCFC1R1-201ENST00000248089 RNF182Q8N6D2 247 aa15.29■□□□□ 0.04
HCFC1R1-201ENST00000248089 MGST2Q99735 147 aa15.29■□□□□ 0.04
HCFC1R1-201ENST00000248089 SLC35B3Q9H1N7 401 aa15.29■□□□□ 0.04
HCFC1R1-201ENST00000248089 ARV1Q9H2C2 271 aa15.29■□□□□ 0.04
HCFC1R1-201ENST00000248089 GPN1Q9HCN4 374 aaPredicted RBP15.29■□□□□ 0.04
HCFC1R1-201ENST00000248089 IGHV3OR16-12A0A075B7B8 117 aa15.28■□□□□ 0.04
HCFC1R1-201ENST00000248089 ELOA3CA0A087WX78 387 aaPredicted RBP15.28■□□□□ 0.04
HCFC1R1-201ENST00000248089 A0A0J9YX75 114 aa15.28■□□□□ 0.04
HCFC1R1-201ENST00000248089 IFITM3Q01628 133 aa15.28■□□□□ 0.04
HCFC1R1-201ENST00000248089 RAB32Q13637 225 aa15.28■□□□□ 0.04
HCFC1R1-201ENST00000248089 PATE2Q6UY27 113 aa15.28■□□□□ 0.04
HCFC1R1-201ENST00000248089 ZNF709Q8N972 641 aa15.28■□□□□ 0.04
HCFC1R1-201ENST00000248089 C11orf1Q9H5F2 150 aa15.28■□□□□ 0.04
HCFC1R1-201ENST00000248089 COX7A2P2O60397 106 aa15.27■□□□□ 0.04
HCFC1R1-201ENST00000248089 PSG9Q00887 426 aa15.27■□□□□ 0.04
HCFC1R1-201ENST00000248089 HRH4Q9H3N8 390 aa15.27■□□□□ 0.04
HCFC1R1-201ENST00000248089 TRAV8-2A0A0B4J237 113 aa15.26■□□□□ 0.03
HCFC1R1-201ENST00000248089 HLA-DMBP28068 263 aa15.26■□□□□ 0.03
HCFC1R1-201ENST00000248089 PXDC1Q5TGL8 231 aa15.26■□□□□ 0.03
HCFC1R1-201ENST00000248089 NRARPQ7Z6K4 114 aa15.26■□□□□ 0.03
HCFC1R1-201ENST00000248089 STX12Q86Y82 276 aa15.26■□□□□ 0.03
HCFC1R1-201ENST00000248089 ZNF738Q8NE65 137 aa15.26■□□□□ 0.03
HCFC1R1-201ENST00000248089 CLUHP3Q96NS8 147 aa15.26■□□□□ 0.03
HCFC1R1-201ENST00000248089 LYRM2Q9NU23 88 aaPredicted RBP15.26■□□□□ 0.03
HCFC1R1-201ENST00000248089 UQCC1Q9NVA1 299 aa15.26■□□□□ 0.03
HCFC1R1-201ENST00000248089 CELA1Q9UNI1 258 aa15.26■□□□□ 0.03
HCFC1R1-201ENST00000248089 UBE2L5PA0A1B0GUS4 154 aa15.25■□□□□ 0.03
HCFC1R1-201ENST00000248089 IGSF23A1L1A6 192 aa15.25■□□□□ 0.03
HCFC1R1-201ENST00000248089 CAMLGP49069 296 aa15.25■□□□□ 0.03
HCFC1R1-201ENST00000248089 LINC00305Q7Z4B0 112 aa15.25■□□□□ 0.03
HCFC1R1-201ENST00000248089 LRRC20Q8TCA0 184 aa15.25■□□□□ 0.03
HCFC1R1-201ENST00000248089 C2CD4CQ8TF44 421 aa15.25■□□□□ 0.03
HCFC1R1-201ENST00000248089 SIX6O95475 246 aa15.24■□□□□ 0.03
HCFC1R1-201ENST00000248089 ZNF705DP0CH99 300 aaPredicted RBP15.24■□□□□ 0.03
HCFC1R1-201ENST00000248089 ZNF705BP0CI00 300 aaPredicted RBP15.24■□□□□ 0.03
HCFC1R1-201ENST00000248089 SULT1A1P50225 295 aa15.24■□□□□ 0.03
HCFC1R1-201ENST00000248089 BAXQ07812 192 aa15.24■□□□□ 0.03
HCFC1R1-201ENST00000248089 IL15RAQ13261 267 aa15.24■□□□□ 0.03
HCFC1R1-201ENST00000248089 RAB31Q13636 194 aa15.24■□□□□ 0.03
HCFC1R1-201ENST00000248089 ZNF705AQ6ZN79 300 aaPredicted RBP15.24■□□□□ 0.03
HCFC1R1-201ENST00000248089 Q6ZTC4 211 aa15.24■□□□□ 0.03
HCFC1R1-201ENST00000248089 ZNF767PQ75MW2 155 aa15.24■□□□□ 0.03
HCFC1R1-201ENST00000248089 RNF24Q9Y225 148 aa15.24■□□□□ 0.03
HCFC1R1-201ENST00000248089 A0A087X0K7 114 aa15.23■□□□□ 0.03
HCFC1R1-201ENST00000248089 ZNF705FA8MVS1 300 aaPredicted RBP15.23■□□□□ 0.03
HCFC1R1-201ENST00000248089 INMT-MINDY4F8WBC2 141 aa15.23■□□□□ 0.03
HCFC1R1-201ENST00000248089 CNN1P51911 297 aaKnown RBP15.23■□□□□ 0.03
HCFC1R1-201ENST00000248089 EMP1P54849 157 aa15.23■□□□□ 0.03
HCFC1R1-201ENST00000248089 HBG1P69891 147 aa15.23■□□□□ 0.03
HCFC1R1-201ENST00000248089 HBG2P69892 147 aa15.23■□□□□ 0.03
HCFC1R1-201ENST00000248089 TMEM252Q8N6L7 170 aa15.23■□□□□ 0.03
HCFC1R1-201ENST00000248089 GOLT1BQ9Y3E0 138 aa15.23■□□□□ 0.03
HCFC1R1-201ENST00000248089 C11orf94C9JXX5 98 aa15.22■□□□□ 0.03
HCFC1R1-201ENST00000248089 PRAF2O60831 178 aa15.22■□□□□ 0.03
HCFC1R1-201ENST00000248089 DUSP14O95147 198 aaKnown RBP15.22■□□□□ 0.03
HCFC1R1-201ENST00000248089 SNRPCP09234 159 aaKnown RBP15.22■□□□□ 0.03
HCFC1R1-201ENST00000248089 S100A11P31949 105 aa15.22■□□□□ 0.03
HCFC1R1-201ENST00000248089 LRRC37A5PQ49AS3 106 aa15.22■□□□□ 0.03
HCFC1R1-201ENST00000248089 C10orf113Q5VZT2 155 aa15.22■□□□□ 0.03
HCFC1R1-201ENST00000248089 MIC13Q5XKP0 118 aa15.22■□□□□ 0.03
HCFC1R1-201ENST00000248089 WDR83OSQ9Y284 106 aa15.22■□□□□ 0.03
HCFC1R1-201ENST00000248089 IGLL5B9A064 214 aa15.21■□□□□ 0.03
HCFC1R1-201ENST00000248089 PRB4P10163 310 aaPredicted RBP15.21■□□□□ 0.03
HCFC1R1-201ENST00000248089 DEFA1P59665 94 aa15.21■□□□□ 0.03
HCFC1R1-201ENST00000248089 DEFA3P59666 94 aa15.21■□□□□ 0.03
HCFC1R1-201ENST00000248089 MORN5Q5VZ52 161 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms