RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 A6NDX4 124 aa18.14■□□□□ 0.49
MSX2-201ENST00000239243 H3BUX3 64 aa18.14■□□□□ 0.49
MSX2-201ENST00000239243 ATP6V0BQ99437 205 aa18.14■□□□□ 0.49
MSX2-201ENST00000239243 GPR183P32249 361 aa18.14■□□□□ 0.49
MSX2-201ENST00000239243 ADMP35318 185 aa18.14■□□□□ 0.49
MSX2-201ENST00000239243 NHLRC2Q8NBF2 726 aa18.14■□□□□ 0.49
MSX2-201ENST00000239243 FAM208BQ5VWN6 2430 aa18.13■□□□□ 0.49
MSX2-201ENST00000239243 RPL7P18124 248 aaKnown RBP18.13■□□□□ 0.49
MSX2-201ENST00000239243 C19orf54Q5BKX5 351 aa18.13■□□□□ 0.49
MSX2-201ENST00000239243 RPL15P61313 204 aaKnown RBP18.13■□□□□ 0.49
MSX2-201ENST00000239243 LOXL1Q08397 574 aaPredicted RBP18.13■□□□□ 0.49
MSX2-201ENST00000239243 TRAPPC1Q9Y5R8 145 aa18.13■□□□□ 0.49
MSX2-201ENST00000239243 EPG5Q9HCE0 2579 aa18.13■□□□□ 0.49
MSX2-201ENST00000239243 FAM223BA6NKX1 122 aa18.12■□□□□ 0.49
MSX2-201ENST00000239243 ZNF705GA8MUZ8 300 aaPredicted RBP18.12■□□□□ 0.49
MSX2-201ENST00000239243 IGF1P05019 195 aa18.12■□□□□ 0.49
MSX2-201ENST00000239243 CLEC3BP05452 202 aa18.12■□□□□ 0.49
MSX2-201ENST00000239243 FAM223AQ8IWN6 122 aa18.12■□□□□ 0.49
MSX2-201ENST00000239243 LRRC75A-AS1Q8N1F1 130 aa18.12■□□□□ 0.49
MSX2-201ENST00000239243 ZNF414Q96IQ9 312 aa18.12■□□□□ 0.49
MSX2-201ENST00000239243 SERTAD4Q9NUC0 356 aa18.12■□□□□ 0.49
MSX2-201ENST00000239243 LTAP01374 205 aa18.11■□□□□ 0.49
MSX2-201ENST00000239243 LY6EQ16553 131 aa18.11■□□□□ 0.49
MSX2-201ENST00000239243 C9orf152Q5JTZ5 239 aa18.11■□□□□ 0.49
MSX2-201ENST00000239243 SIGLEC15Q6ZMC9 328 aa18.11■□□□□ 0.49
MSX2-201ENST00000239243 EXOC3-AS1Q8N2X6 119 aa18.11■□□□□ 0.49
MSX2-201ENST00000239243 LRRK2Q5S007 2527 aa18.11■□□□□ 0.49
MSX2-201ENST00000239243 AVPP01185 164 aa18.11■□□□□ 0.49
MSX2-201ENST00000239243 RAB9AP51151 201 aa18.11■□□□□ 0.49
MSX2-201ENST00000239243 K7EQM0 130 aa18.1■□□□□ 0.49
MSX2-201ENST00000239243 ATP5G2Q06055 141 aa18.1■□□□□ 0.49
MSX2-201ENST00000239243 OR8I2Q8N0Y5 310 aa18.1■□□□□ 0.49
MSX2-201ENST00000239243 MLST8Q9BVC4 326 aa18.1■□□□□ 0.49
MSX2-201ENST00000239243 AAMDCQ9H7C9 122 aa18.1■□□□□ 0.49
MSX2-201ENST00000239243 TRBV6-1A0A0K0K1D8 114 aa18.1■□□□□ 0.49
MSX2-201ENST00000239243 GATCO43716 136 aaKnown RBP18.1■□□□□ 0.49
MSX2-201ENST00000239243 IGHG2P01859 326 aa18.1■□□□□ 0.49
MSX2-201ENST00000239243 DEFB113Q30KQ7 82 aa18.1■□□□□ 0.49
MSX2-201ENST00000239243 COX19Q49B96 90 aa18.1■□□□□ 0.49
MSX2-201ENST00000239243 BCL6BQ8N143 479 aaPredicted RBP18.1■□□□□ 0.49
MSX2-201ENST00000239243 CCDC140Q96MF4 163 aa18.1■□□□□ 0.49
MSX2-201ENST00000239243 MS4A10Q96PG2 267 aa18.1■□□□□ 0.49
MSX2-201ENST00000239243 SMIM27A0A1W2PRY6 76 aa18.09■□□□□ 0.49
MSX2-201ENST00000239243 MEOX2P50222 304 aa18.09■□□□□ 0.49
MSX2-201ENST00000239243 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.09■□□□□ 0.49
MSX2-201ENST00000239243 BRI3O95415 125 aa18.08■□□□□ 0.49
MSX2-201ENST00000239243 SMIM6P0DI80 62 aa18.08■□□□□ 0.49
MSX2-201ENST00000239243 PSG9Q00887 426 aa18.08■□□□□ 0.49
MSX2-201ENST00000239243 CLEC19AQ6UXS0 136 aa18.08■□□□□ 0.49
MSX2-201ENST00000239243 C12orf57Q99622 126 aa18.08■□□□□ 0.49
MSX2-201ENST00000239243 SOX21Q9Y651 276 aaPredicted RBP18.08■□□□□ 0.49
MSX2-201ENST00000239243 H3BUA1 57 aa18.08■□□□□ 0.48
MSX2-201ENST00000239243 RELQ04864 619 aaPredicted RBP18.08■□□□□ 0.48
MSX2-201ENST00000239243 TOMM20LQ6UXN7 152 aa18.08■□□□□ 0.48
MSX2-201ENST00000239243 NUDT10Q8NFP7 164 aa18.08■□□□□ 0.48
MSX2-201ENST00000239243 NUDT11Q96G61 164 aa18.08■□□□□ 0.48
MSX2-201ENST00000239243 C17orf77Q96MU5 243 aa18.08■□□□□ 0.48
MSX2-201ENST00000239243 GNB4Q9HAV0 340 aa18.08■□□□□ 0.48
MSX2-201ENST00000239243 UTP20O75691 2785 aaKnown RBP18.07■□□□□ 0.48
MSX2-201ENST00000239243 TGFAP01135 160 aa18.07■□□□□ 0.48
MSX2-201ENST00000239243 PRR27Q6MZM9 219 aa18.07■□□□□ 0.48
MSX2-201ENST00000239243 GOLT1AQ6ZVE7 132 aa18.07■□□□□ 0.48
MSX2-201ENST00000239243 TMEM75Q8N9X5 138 aa18.07■□□□□ 0.48
MSX2-201ENST00000239243 GRAMD2BQ96HH9 432 aa18.07■□□□□ 0.48
MSX2-201ENST00000239243 S100A2P29034 98 aa18.07■□□□□ 0.48
MSX2-201ENST00000239243 COA6Q5JTJ3 125 aaKnown RBP18.07■□□□□ 0.48
MSX2-201ENST00000239243 Q86TA4 180 aa18.07■□□□□ 0.48
MSX2-201ENST00000239243 HIST3H2BBQ8N257 126 aa18.07■□□□□ 0.48
MSX2-201ENST00000239243 SGK494Q96LW2 274 aa18.07■□□□□ 0.48
MSX2-201ENST00000239243 ZFAND3Q9H8U3 227 aa18.07■□□□□ 0.48
MSX2-201ENST00000239243 ZNF492Q9P255 531 aa18.07■□□□□ 0.48
MSX2-201ENST00000239243 ANKRD17O75179 2603 aaKnown RBP18.06■□□□□ 0.48
MSX2-201ENST00000239243 SERTM2A0A1B0GWG4 89 aa18.06■□□□□ 0.48
MSX2-201ENST00000239243 XKRY2A2RUG3 117 aa18.06■□□□□ 0.48
MSX2-201ENST00000239243 TRGV3P03979 118 aa18.06■□□□□ 0.48
MSX2-201ENST00000239243 COL8A1P27658 744 aa18.06■□□□□ 0.48
MSX2-201ENST00000239243 KRTAP10-9P60411 292 aa18.06■□□□□ 0.48
MSX2-201ENST00000239243 WDR73Q6P4I2 378 aa18.06■□□□□ 0.48
MSX2-201ENST00000239243 TMEM183AQ8IXX5 376 aa18.06■□□□□ 0.48
MSX2-201ENST00000239243 ARL6IP6Q8N6S5 226 aa18.06■□□□□ 0.48
MSX2-201ENST00000239243 MBD6Q96DN6 1003 aa18.06■□□□□ 0.48
MSX2-201ENST00000239243 ZNF253O75346 499 aa18.05■□□□□ 0.48
MSX2-201ENST00000239243 RNF223E7ERA6 249 aa18.04■□□□□ 0.48
MSX2-201ENST00000239243 MT-ND6P03923 174 aa18.04■□□□□ 0.48
MSX2-201ENST00000239243 CSN1S1P47710 185 aa18.04■□□□□ 0.48
MSX2-201ENST00000239243 GNB1LQ9BYB4 327 aa18.04■□□□□ 0.48
MSX2-201ENST00000239243 LINC00527Q9UJ94 153 aa18.04■□□□□ 0.48
MSX2-201ENST00000239243 ZFP30Q9Y2G7 519 aa18.04■□□□□ 0.48
MSX2-201ENST00000239243 IGHV3-35A0A0C4DH35 117 aa18.03■□□□□ 0.48
MSX2-201ENST00000239243 IZUMO1RA6ND01 250 aa18.03■□□□□ 0.48
MSX2-201ENST00000239243 IGLV2-11P01706 119 aa18.03■□□□□ 0.48
MSX2-201ENST00000239243 CRYBG3Q68DQ2 2970 aa18.03■□□□□ 0.48
MSX2-201ENST00000239243 DIRC3C9JPN6 131 aa18.03■□□□□ 0.48
MSX2-201ENST00000239243 TCL1AP56279 114 aa18.03■□□□□ 0.48
MSX2-201ENST00000239243 CT83Q5H943 113 aa18.03■□□□□ 0.48
MSX2-201ENST00000239243 Q5PR19 223 aa18.03■□□□□ 0.48
MSX2-201ENST00000239243 TSKUQ8WUA8 353 aa18.03■□□□□ 0.48
MSX2-201ENST00000239243 DAZAP1Q96EP5 407 aaKnown RBP18.03■□□□□ 0.48
MSX2-201ENST00000239243 USMG5Q96IX5 58 aa18.03■□□□□ 0.48
MSX2-201ENST00000239243 GPR61Q9BZJ8 451 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms