RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 SSBP2P81877 361 aaPredicted RBP10.79□□□□□ -0.68
COL1A1-201ENST00000225964 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.79□□□□□ -0.68
COL1A1-201ENST00000225964 J3QKU1 62 aa10.79□□□□□ -0.68
COL1A1-201ENST00000225964 GAGE2EQ4V326 116 aa10.79□□□□□ -0.68
COL1A1-201ENST00000225964 GAGE2DQ9UEU5 116 aa10.79□□□□□ -0.68
COL1A1-201ENST00000225964 IGHV3-16A0A0C4DH30 117 aa10.79□□□□□ -0.68
COL1A1-201ENST00000225964 DAZ1Q9NQZ3 744 aaKnown RBP10.79□□□□□ -0.68
COL1A1-201ENST00000225964 IL17RELQ6ZVW7 336 aa10.78□□□□□ -0.68
COL1A1-201ENST00000225964 DKK1O94907 266 aa10.78□□□□□ -0.68
COL1A1-201ENST00000225964 SAMD5Q5TGI4 173 aa10.78□□□□□ -0.68
COL1A1-201ENST00000225964 A6NNC1 897 aa10.78□□□□□ -0.68
COL1A1-201ENST00000225964 BMPERQ8N8U9 685 aa10.78□□□□□ -0.68
COL1A1-201ENST00000225964 ID3Q02535 119 aa10.78□□□□□ -0.68
COL1A1-201ENST00000225964 F8VVB4 439 aa10.78□□□□□ -0.68
COL1A1-201ENST00000225964 F8VWA3 439 aa10.78□□□□□ -0.68
COL1A1-201ENST00000225964 ZNF479Q96JC4 524 aa10.78□□□□□ -0.68
COL1A1-201ENST00000225964 GAGE12JA6NER3 117 aa10.77□□□□□ -0.68
COL1A1-201ENST00000225964 SMKR1H3BMG3 65 aa10.77□□□□□ -0.68
COL1A1-201ENST00000225964 LHBP01229 141 aa10.77□□□□□ -0.68
COL1A1-201ENST00000225964 GAGE1Q13065 139 aa10.77□□□□□ -0.68
COL1A1-201ENST00000225964 GAGE4Q13068 117 aa10.77□□□□□ -0.68
COL1A1-201ENST00000225964 GAGE5Q13069 117 aa10.77□□□□□ -0.68
COL1A1-201ENST00000225964 GAGE13Q4V321 117 aa10.77□□□□□ -0.68
COL1A1-201ENST00000225964 C1orf122Q6ZSJ8 110 aa10.77□□□□□ -0.68
COL1A1-201ENST00000225964 C5orf24Q7Z6I8 188 aa10.77□□□□□ -0.68
COL1A1-201ENST00000225964 MRAPQ8TCY5 172 aa10.77□□□□□ -0.68
COL1A1-201ENST00000225964 HOXD3P31249 432 aaPredicted RBP10.77□□□□□ -0.68
COL1A1-201ENST00000225964 SEC11AP67812 179 aa10.77□□□□□ -0.68
COL1A1-201ENST00000225964 ANAPC13Q9BS18 74 aa10.77□□□□□ -0.68
COL1A1-201ENST00000225964 SPXQ9BT56 116 aa10.77□□□□□ -0.68
COL1A1-201ENST00000225964 SMPXQ9UHP9 88 aa10.77□□□□□ -0.68
COL1A1-201ENST00000225964 KLF12Q9Y4X4 402 aa10.77□□□□□ -0.68
COL1A1-201ENST00000225964 APC2O95996 2303 aa10.77□□□□□ -0.68
COL1A1-201ENST00000225964 IGKV1D-17A0A075B6S4 117 aa10.77□□□□□ -0.69
COL1A1-201ENST00000225964 DLX4Q92988 240 aaPredicted RBP10.77□□□□□ -0.69
COL1A1-201ENST00000225964 TET1Q8NFU7 2136 aa10.77□□□□□ -0.69
COL1A1-201ENST00000225964 K7ENP7 123 aa10.77□□□□□ -0.69
COL1A1-201ENST00000225964 APOC4P55056 127 aa10.77□□□□□ -0.69
COL1A1-201ENST00000225964 KNCNA6PVL3 124 aa10.77□□□□□ -0.69
COL1A1-201ENST00000225964 GATA3P23771 443 aa10.77□□□□□ -0.69
COL1A1-201ENST00000225964 Q6ZS92 163 aa10.77□□□□□ -0.69
COL1A1-201ENST00000225964 HAPLN4Q86UW8 402 aa10.77□□□□□ -0.69
COL1A1-201ENST00000225964 SPOCK3Q9BQ16 436 aa10.77□□□□□ -0.69
COL1A1-201ENST00000225964 FBLN5Q9UBX5 448 aa10.77□□□□□ -0.69
COL1A1-201ENST00000225964 LINC00205P59089 165 aa10.76□□□□□ -0.69
COL1A1-201ENST00000225964 NR2C2APQ86WQ0 139 aa10.76□□□□□ -0.69
COL1A1-201ENST00000225964 PRTN3P24158 256 aa10.76□□□□□ -0.69
COL1A1-201ENST00000225964 HSD52Q0P140 79 aa10.76□□□□□ -0.69
COL1A1-201ENST00000225964 NKAPP1Q8N9T2 125 aa10.76□□□□□ -0.69
COL1A1-201ENST00000225964 ZMAT4Q9H898 229 aa10.76□□□□□ -0.69
COL1A1-201ENST00000225964 KLK9Q9UKQ9 250 aa10.76□□□□□ -0.69
COL1A1-201ENST00000225964 SIPA1L1O43166 1804 aa10.76□□□□□ -0.69
COL1A1-201ENST00000225964 BTCP35070 178 aa10.76□□□□□ -0.69
COL1A1-201ENST00000225964 FAM90A2PQ658T7 463 aa10.76□□□□□ -0.69
COL1A1-201ENST00000225964 TIMM21Q9BVV7 248 aa10.76□□□□□ -0.69
COL1A1-201ENST00000225964 MYMXA0A1B0GTQ4 84 aa10.76□□□□□ -0.69
COL1A1-201ENST00000225964 ZNF114Q8NC26 417 aa10.76□□□□□ -0.69
COL1A1-201ENST00000225964 GFI1Q99684 422 aa10.76□□□□□ -0.69
COL1A1-201ENST00000225964 ATP6V0E1O15342 81 aa10.76□□□□□ -0.69
COL1A1-201ENST00000225964 CLPSP04118 112 aa10.76□□□□□ -0.69
COL1A1-201ENST00000225964 PRIMA1Q86XR5 153 aa10.75□□□□□ -0.69
COL1A1-201ENST00000225964 LINC00473A8K010 186 aa10.75□□□□□ -0.69
COL1A1-201ENST00000225964 AZU1P20160 251 aa10.75□□□□□ -0.69
COL1A1-201ENST00000225964 PCP4P48539 62 aa10.75□□□□□ -0.69
COL1A1-201ENST00000225964 HGFACQ04756 655 aa10.75□□□□□ -0.69
COL1A1-201ENST00000225964 Q6P435 159 aa10.75□□□□□ -0.69
COL1A1-201ENST00000225964 TMEM158Q8WZ71 300 aa10.75□□□□□ -0.69
COL1A1-201ENST00000225964 SPINK13Q1W4C9 94 aa10.75□□□□□ -0.69
COL1A1-201ENST00000225964 LY6G6FQ5SQ64 297 aa10.75□□□□□ -0.69
COL1A1-201ENST00000225964 SUMO4Q6EEV6 95 aa10.75□□□□□ -0.69
COL1A1-201ENST00000225964 TMEM126AQ9H061 195 aa10.75□□□□□ -0.69
COL1A1-201ENST00000225964 H0YIZ8 118 aa10.75□□□□□ -0.69
COL1A1-201ENST00000225964 J3QRE1 110 aa10.75□□□□□ -0.69
COL1A1-201ENST00000225964 IGHV1-69DA0A0B4J2H0 117 aa10.74□□□□□ -0.69
COL1A1-201ENST00000225964 IGHV1-69P01742 117 aa10.74□□□□□ -0.69
COL1A1-201ENST00000225964 TRAV8-3A0A0A6YYJ7 113 aa10.74□□□□□ -0.69
COL1A1-201ENST00000225964 THAP8Q8NA92 274 aa10.74□□□□□ -0.69
COL1A1-201ENST00000225964 NUP35Q8NFH5 326 aa10.74□□□□□ -0.69
COL1A1-201ENST00000225964 GSN-AS1Q9NRJ2 163 aa10.74□□□□□ -0.69
COL1A1-201ENST00000225964 OVOL2Q9BRP0 275 aa10.74□□□□□ -0.69
COL1A1-201ENST00000225964 ZNRD1Q9P1U0 126 aa10.74□□□□□ -0.69
COL1A1-201ENST00000225964 CR1LQ2VPA4 569 aa10.74□□□□□ -0.69
COL1A1-201ENST00000225964 TRPT1Q86TN4 253 aaKnown RBP10.74□□□□□ -0.69
COL1A1-201ENST00000225964 PNRC2Q9NPJ4 139 aaKnown RBP10.74□□□□□ -0.69
COL1A1-201ENST00000225964 PAX9P55771 341 aa10.74□□□□□ -0.69
COL1A1-201ENST00000225964 ATRAIDQ6UW56 229 aa10.74□□□□□ -0.69
COL1A1-201ENST00000225964 AGMATQ9BSE5 352 aa10.74□□□□□ -0.69
COL1A1-201ENST00000225964 ANK1P16157 1881 aa10.74□□□□□ -0.69
COL1A1-201ENST00000225964 GREB1LQ9C091 1923 aaPredicted RBP10.74□□□□□ -0.69
COL1A1-201ENST00000225964 TRBV25-1A0A075B6N4 114 aa10.73□□□□□ -0.69
COL1A1-201ENST00000225964 C5orf63A6NC05 138 aa10.73□□□□□ -0.69
COL1A1-201ENST00000225964 RASL11AQ6T310 242 aa10.73□□□□□ -0.69
COL1A1-201ENST00000225964 C2orf82Q6UX34 121 aa10.73□□□□□ -0.69
COL1A1-201ENST00000225964 TRAV8-1A0A0A6YYK1 113 aa10.73□□□□□ -0.69
COL1A1-201ENST00000225964 GAGE12BA1L429 117 aa10.73□□□□□ -0.69
COL1A1-201ENST00000225964 GAGE7O76087 117 aa10.73□□□□□ -0.69
COL1A1-201ENST00000225964 GAGE12FP0CL80 117 aa10.73□□□□□ -0.69
COL1A1-201ENST00000225964 GAGE12GP0CL81 117 aa10.73□□□□□ -0.69
COL1A1-201ENST00000225964 GAGE12IP0CL82 117 aa10.73□□□□□ -0.69
COL1A1-201ENST00000225964 NTF4P34130 210 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms