RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 HLA-DRB1P01911 266 aa17.33■□□□□ 0.37
SMARCD2-201ENST00000225742 GOLT1AQ6ZVE7 132 aa17.33■□□□□ 0.37
SMARCD2-201ENST00000225742 Q8N6K4 173 aa17.33■□□□□ 0.37
SMARCD2-201ENST00000225742 GTSF1Q8WW33 167 aa17.33■□□□□ 0.37
SMARCD2-201ENST00000225742 IGFBPL1Q8WX77 278 aa17.33■□□□□ 0.37
SMARCD2-201ENST00000225742 ARPC1AQ92747 370 aa17.33■□□□□ 0.37
SMARCD2-201ENST00000225742 SNHG12Q9BXW3 62 aa17.33■□□□□ 0.37
SMARCD2-201ENST00000225742 RNF114Q9Y508 228 aa17.33■□□□□ 0.37
SMARCD2-201ENST00000225742 PDE6HQ13956 83 aa17.33■□□□□ 0.36
SMARCD2-201ENST00000225742 EXOC3-AS1Q8N2X6 119 aa17.33■□□□□ 0.36
SMARCD2-201ENST00000225742 PIEZO2Q9H5I5 2752 aa17.32■□□□□ 0.36
SMARCD2-201ENST00000225742 BSNQ9UPA5 3926 aa17.32■□□□□ 0.36
SMARCD2-201ENST00000225742 MRPS12O15235 138 aaKnown RBP17.32■□□□□ 0.36
SMARCD2-201ENST00000225742 GNG7O60262 68 aa17.32■□□□□ 0.36
SMARCD2-201ENST00000225742 HSBP1O75506 76 aa17.32■□□□□ 0.36
SMARCD2-201ENST00000225742 SCGB2A1O75556 95 aa17.32■□□□□ 0.36
SMARCD2-201ENST00000225742 IL4P05112 153 aa17.32■□□□□ 0.36
SMARCD2-201ENST00000225742 C3orf79P0CE67 100 aa17.32■□□□□ 0.36
SMARCD2-201ENST00000225742 COL8A1P27658 744 aa17.32■□□□□ 0.36
SMARCD2-201ENST00000225742 FOXA3P55318 350 aaPredicted RBP17.32■□□□□ 0.36
SMARCD2-201ENST00000225742 TDRG1Q3Y452 100 aa17.32■□□□□ 0.36
SMARCD2-201ENST00000225742 CYB5R2Q6BCY4 276 aa17.32■□□□□ 0.36
SMARCD2-201ENST00000225742 SIGLEC15Q6ZMC9 328 aa17.32■□□□□ 0.36
SMARCD2-201ENST00000225742 VMO1Q7Z5L0 202 aa17.32■□□□□ 0.36
SMARCD2-201ENST00000225742 PRNTQ86SH4 94 aa17.32■□□□□ 0.36
SMARCD2-201ENST00000225742 THYN1Q9P016 225 aa17.32■□□□□ 0.36
SMARCD2-201ENST00000225742 PAM16Q9Y3D7 125 aa17.32■□□□□ 0.36
SMARCD2-201ENST00000225742 ZNF705AQ6ZN79 300 aaPredicted RBP17.31■□□□□ 0.36
SMARCD2-201ENST00000225742 PGLYRP4Q96LB8 373 aa17.31■□□□□ 0.36
SMARCD2-201ENST00000225742 FANCD2OSQ96PS1 177 aa17.31■□□□□ 0.36
SMARCD2-201ENST00000225742 PTPRZ1P23471 2315 aaPredicted RBP17.31■□□□□ 0.36
SMARCD2-201ENST00000225742 A6NNC1 897 aa17.31■□□□□ 0.36
SMARCD2-201ENST00000225742 NUTF2P61970 127 aaKnown RBP17.31■□□□□ 0.36
SMARCD2-201ENST00000225742 DMRTA1Q5VZB9 504 aa17.31■□□□□ 0.36
SMARCD2-201ENST00000225742 OR2D3Q8NGH3 330 aa17.31■□□□□ 0.36
SMARCD2-201ENST00000225742 ZNF414Q96IQ9 312 aa17.31■□□□□ 0.36
SMARCD2-201ENST00000225742 SSBP4Q9BWG4 385 aaPredicted RBP17.31■□□□□ 0.36
SMARCD2-201ENST00000225742 SERTM2A0A1B0GWG4 89 aa17.3■□□□□ 0.36
SMARCD2-201ENST00000225742 HAX1O00165 279 aa17.3■□□□□ 0.36
SMARCD2-201ENST00000225742 NTF3P20783 257 aa17.3■□□□□ 0.36
SMARCD2-201ENST00000225742 ARL6IP6Q8N6S5 226 aa17.3■□□□□ 0.36
SMARCD2-201ENST00000225742 CIARTQ8N365 385 aaPredicted RBP17.29■□□□□ 0.36
SMARCD2-201ENST00000225742 FAM19A2Q8N3H0 131 aa17.29■□□□□ 0.36
SMARCD2-201ENST00000225742 ANKHD1Q8IWZ3 2542 aaKnown RBP17.29■□□□□ 0.36
SMARCD2-201ENST00000225742 FCGR2BP31994 310 aaPredicted RBP17.28■□□□□ 0.36
SMARCD2-201ENST00000225742 CTRLP40313 264 aa17.28■□□□□ 0.36
SMARCD2-201ENST00000225742 PMCHL1Q16048 86 aa17.28■□□□□ 0.36
SMARCD2-201ENST00000225742 PSG3Q16557 428 aa17.28■□□□□ 0.36
SMARCD2-201ENST00000225742 CHCHD1Q96BP2 118 aaKnown RBP17.28■□□□□ 0.36
SMARCD2-201ENST00000225742 PSG8Q9UQ74 426 aa17.28■□□□□ 0.36
SMARCD2-201ENST00000225742 TRAV8-1A0A0A6YYK1 113 aa17.28■□□□□ 0.36
SMARCD2-201ENST00000225742 M0R2Z0 102 aa17.28■□□□□ 0.36
SMARCD2-201ENST00000225742 S100A7P31151 101 aa17.28■□□□□ 0.36
SMARCD2-201ENST00000225742 TXN2Q99757 166 aa17.28■□□□□ 0.36
SMARCD2-201ENST00000225742 NDFIP1Q9BT67 221 aa17.28■□□□□ 0.36
SMARCD2-201ENST00000225742 C21orf62Q9NYP8 219 aa17.28■□□□□ 0.36
SMARCD2-201ENST00000225742 TLN1Q9Y490 2541 aaKnown RBP17.28■□□□□ 0.36
SMARCD2-201ENST00000225742 A0A1B0GW15 77 aa17.27■□□□□ 0.36
SMARCD2-201ENST00000225742 CD24P25063 80 aa17.27■□□□□ 0.36
SMARCD2-201ENST00000225742 RNASEKQ6P5S7 137 aaKnown RBP17.27■□□□□ 0.36
SMARCD2-201ENST00000225742 FAM181BA6NEQ2 426 aa17.26■□□□□ 0.35
SMARCD2-201ENST00000225742 CHEK1O14757 476 aa17.26■□□□□ 0.35
SMARCD2-201ENST00000225742 RNF224P0DH78 156 aa17.26■□□□□ 0.35
SMARCD2-201ENST00000225742 PSG9Q00887 426 aa17.26■□□□□ 0.35
SMARCD2-201ENST00000225742 Q56UQ5 140 aa17.26■□□□□ 0.35
SMARCD2-201ENST00000225742 KLF17Q5JT82 389 aaPredicted RBP17.26■□□□□ 0.35
SMARCD2-201ENST00000225742 GATD1Q8NB37 220 aa17.26■□□□□ 0.35
SMARCD2-201ENST00000225742 AAMDCQ9H7C9 122 aa17.26■□□□□ 0.35
SMARCD2-201ENST00000225742 C1RLQ9NZP8 487 aa17.26■□□□□ 0.35
SMARCD2-201ENST00000225742 FBLL1A6NHQ2 334 aaKnown RBP17.26■□□□□ 0.35
SMARCD2-201ENST00000225742 NCBP2LA6PVI3 153 aaKnown RBP17.26■□□□□ 0.35
SMARCD2-201ENST00000225742 Q6AWC8 147 aa17.26■□□□□ 0.35
SMARCD2-201ENST00000225742 C17orf77Q96MU5 243 aa17.26■□□□□ 0.35
SMARCD2-201ENST00000225742 SIRPDQ9H106 197 aa17.26■□□□□ 0.35
SMARCD2-201ENST00000225742 LOC102724200A0A096LPH7 203 aaPredicted RBP17.25■□□□□ 0.35
SMARCD2-201ENST00000225742 A0A1W2PRD5 423 aa17.25■□□□□ 0.35
SMARCD2-201ENST00000225742 A0A1W2PRF3 423 aa17.25■□□□□ 0.35
SMARCD2-201ENST00000225742 A0A1W2PRM7 423 aa17.25■□□□□ 0.35
SMARCD2-201ENST00000225742 APOHP02749 345 aaPredicted RBP17.25■□□□□ 0.35
SMARCD2-201ENST00000225742 TMEM11P17152 192 aa17.25■□□□□ 0.35
SMARCD2-201ENST00000225742 RIGQ13278 110 aa17.25■□□□□ 0.35
SMARCD2-201ENST00000225742 SPATA45Q537H7 98 aa17.25■□□□□ 0.35
SMARCD2-201ENST00000225742 DYNAPQ8N1N2 210 aa17.25■□□□□ 0.35
SMARCD2-201ENST00000225742 KLHDC1Q8N7A1 406 aa17.25■□□□□ 0.35
SMARCD2-201ENST00000225742 ZC2HC1AQ96GY0 325 aa17.25■□□□□ 0.35
SMARCD2-201ENST00000225742 C20orf202A1L168 122 aa17.24■□□□□ 0.35
SMARCD2-201ENST00000225742 F8W735 103 aaPredicted RBP17.24■□□□□ 0.35
SMARCD2-201ENST00000225742 BTF3P20290 206 aaKnown RBP17.24■□□□□ 0.35
SMARCD2-201ENST00000225742 CSN1S1P47710 185 aa17.24■□□□□ 0.35
SMARCD2-201ENST00000225742 ZNF785A8K8V0 405 aa17.24■□□□□ 0.35
SMARCD2-201ENST00000225742 NDPQ00604 133 aa17.24■□□□□ 0.35
SMARCD2-201ENST00000225742 KLK9Q2XQG4 91 aa17.24■□□□□ 0.35
SMARCD2-201ENST00000225742 FBLN7Q53RD9 439 aa17.24■□□□□ 0.35
SMARCD2-201ENST00000225742 COL25A1Q9BXS0 654 aaPredicted RBP17.24■□□□□ 0.35
SMARCD2-201ENST00000225742 UQCR10Q9UDW1 63 aa17.24■□□□□ 0.35
SMARCD2-201ENST00000225742 KLK9Q9UKQ9 250 aa17.24■□□□□ 0.35
SMARCD2-201ENST00000225742 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.23■□□□□ 0.35
SMARCD2-201ENST00000225742 A0A1B0GUT8 65 aa17.23■□□□□ 0.35
SMARCD2-201ENST00000225742 FAM106CPP0CH98 169 aa17.23■□□□□ 0.35
SMARCD2-201ENST00000225742 RPL7P18124 248 aaKnown RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms