RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 C1orf194Q5T5A4 169 aa20.56■□□□□ 0.88
CHMP4B-201ENST00000217402 TMEM61Q8N0U2 210 aa20.56■□□□□ 0.88
CHMP4B-201ENST00000217402 RPRMQ9NS64 109 aa20.56■□□□□ 0.88
CHMP4B-201ENST00000217402 FUT9Q9Y231 359 aa20.56■□□□□ 0.88
CHMP4B-201ENST00000217402 CMYA5Q8N3K9 4069 aa20.55■□□□□ 0.88
CHMP4B-201ENST00000217402 IZUMO1RA6ND01 250 aa20.55■□□□□ 0.88
CHMP4B-201ENST00000217402 RHOBP62745 196 aa20.55■□□□□ 0.88
CHMP4B-201ENST00000217402 SIGLEC15Q6ZMC9 328 aa20.55■□□□□ 0.88
CHMP4B-201ENST00000217402 MRPL32Q9BYC8 188 aaKnown RBP20.55■□□□□ 0.88
CHMP4B-201ENST00000217402 PLA2G2EQ9NZK7 142 aa20.55■□□□□ 0.88
CHMP4B-201ENST00000217402 RBPMS2Q6ZRY4 209 aaKnown RBP20.54■□□□□ 0.88
CHMP4B-201ENST00000217402 RPP25LQ8N5L8 163 aaKnown RBP20.54■□□□□ 0.88
CHMP4B-201ENST00000217402 A0A1W2PPV4 95 aa20.53■□□□□ 0.88
CHMP4B-201ENST00000217402 EIF5AL1Q6IS14 154 aaKnown RBP20.53■□□□□ 0.88
CHMP4B-201ENST00000217402 GPR61Q9BZJ8 451 aa20.53■□□□□ 0.88
CHMP4B-201ENST00000217402 CDC34P49427 236 aaPredicted RBP20.53■□□□□ 0.88
CHMP4B-201ENST00000217402 FAM90A2PQ658T7 463 aa20.53■□□□□ 0.88
CHMP4B-201ENST00000217402 HELTA6NFD8 242 aa20.52■□□□□ 0.88
CHMP4B-201ENST00000217402 G3V4G9 280 aa20.52■□□□□ 0.88
CHMP4B-201ENST00000217402 SLC25A2Q9BXI2 301 aa20.52■□□□□ 0.88
CHMP4B-201ENST00000217402 RNF24Q9Y225 148 aa20.52■□□□□ 0.88
CHMP4B-201ENST00000217402 HMGB3O15347 200 aaKnown RBP20.51■□□□□ 0.87
CHMP4B-201ENST00000217402 RPL7P18124 248 aaKnown RBP20.51■□□□□ 0.87
CHMP4B-201ENST00000217402 GBGT1Q8N5D6 347 aa20.51■□□□□ 0.87
CHMP4B-201ENST00000217402 WIPF1O43516 503 aa20.5■□□□□ 0.87
CHMP4B-201ENST00000217402 GALR1P47211 349 aa20.5■□□□□ 0.87
CHMP4B-201ENST00000217402 FHITP49789 147 aa20.5■□□□□ 0.87
CHMP4B-201ENST00000217402 LCN12Q6JVE5 192 aa20.5■□□□□ 0.87
CHMP4B-201ENST00000217402 ALKAL2Q6UX46 152 aa20.5■□□□□ 0.87
CHMP4B-201ENST00000217402 STXBP6Q8NFX7 210 aa20.5■□□□□ 0.87
CHMP4B-201ENST00000217402 GPR82Q96P67 336 aa20.5■□□□□ 0.87
CHMP4B-201ENST00000217402 UMAD1C9J7I0 102 aa20.49■□□□□ 0.87
CHMP4B-201ENST00000217402 SNRPCP09234 159 aaKnown RBP20.49■□□□□ 0.87
CHMP4B-201ENST00000217402 TFPI2P48307 235 aa20.49■□□□□ 0.87
CHMP4B-201ENST00000217402 GUCA2BQ16661 112 aa20.49■□□□□ 0.87
CHMP4B-201ENST00000217402 FAM74A1Q5RGS3 127 aa20.49■□□□□ 0.87
CHMP4B-201ENST00000217402 BPIFA4PQ86YQ2 179 aa20.49■□□□□ 0.87
CHMP4B-201ENST00000217402 OR2K2Q8NGT1 345 aa20.49■□□□□ 0.87
CHMP4B-201ENST00000217402 FAM167A-AS1Q96KT0 104 aa20.49■□□□□ 0.87
CHMP4B-201ENST00000217402 ACTR3CQ9C0K3 210 aaPredicted RBP20.49■□□□□ 0.87
CHMP4B-201ENST00000217402 CD5P06127 495 aa20.49■□□□□ 0.87
CHMP4B-201ENST00000217402 SSX7Q7RTT5 188 aa20.49■□□□□ 0.87
CHMP4B-201ENST00000217402 FAM213BQ8TBF2 198 aa20.49■□□□□ 0.87
CHMP4B-201ENST00000217402 RAB24Q969Q5 203 aa20.49■□□□□ 0.87
CHMP4B-201ENST00000217402 SMAD5-AS1Q9Y6J3 95 aa20.49■□□□□ 0.87
CHMP4B-201ENST00000217402 MGAM2Q2M2H8 2515 aa20.48■□□□□ 0.87
CHMP4B-201ENST00000217402 TSPAN4O14817 238 aa20.48■□□□□ 0.87
CHMP4B-201ENST00000217402 OR7C2O60412 319 aa20.48■□□□□ 0.87
CHMP4B-201ENST00000217402 PYYP10082 97 aa20.48■□□□□ 0.87
CHMP4B-201ENST00000217402 TAS2R45P59539 299 aa20.48■□□□□ 0.87
CHMP4B-201ENST00000217402 ZNF726P1Q15940 193 aa20.48■□□□□ 0.87
CHMP4B-201ENST00000217402 SAMD5Q5TGI4 173 aa20.48■□□□□ 0.87
CHMP4B-201ENST00000217402 PHYHIPLQ96FC7 376 aa20.48■□□□□ 0.87
CHMP4B-201ENST00000217402 MS4A6AQ9H2W1 248 aa20.48■□□□□ 0.87
CHMP4B-201ENST00000217402 TRAV25A0A0B4J276 109 aa20.47■□□□□ 0.87
CHMP4B-201ENST00000217402 ZNF785A8K8V0 405 aa20.47■□□□□ 0.87
CHMP4B-201ENST00000217402 MRPS12O15235 138 aaKnown RBP20.47■□□□□ 0.87
CHMP4B-201ENST00000217402 GP9P14770 177 aa20.47■□□□□ 0.87
CHMP4B-201ENST00000217402 ATF4P18848 351 aaPredicted RBP20.47■□□□□ 0.87
CHMP4B-201ENST00000217402 KHDC3LQ587J8 217 aa20.47■□□□□ 0.87
CHMP4B-201ENST00000217402 WFDC3Q8IUB2 231 aa20.47■□□□□ 0.87
CHMP4B-201ENST00000217402 DNASE2O00115 360 aaPredicted RBP20.45■□□□□ 0.87
CHMP4B-201ENST00000217402 NRN1Q9NPD7 142 aa20.45■□□□□ 0.87
CHMP4B-201ENST00000217402 CTXND1A0A1B0GTU2 59 aa20.45■□□□□ 0.86
CHMP4B-201ENST00000217402 H3BTX0 84 aa20.45■□□□□ 0.86
CHMP4B-201ENST00000217402 OR10J4P0C629 311 aa20.45■□□□□ 0.86
CHMP4B-201ENST00000217402 SPAG8Q99932 426 aaPredicted RBP20.45■□□□□ 0.86
CHMP4B-201ENST00000217402 PAXXQ9BUH6 204 aa20.45■□□□□ 0.86
CHMP4B-201ENST00000217402 OR51M1Q9H341 326 aa20.45■□□□□ 0.86
CHMP4B-201ENST00000217402 TMEM14CQ9P0S9 112 aa20.45■□□□□ 0.86
CHMP4B-201ENST00000217402 SULT1A2P50226 295 aa20.44■□□□□ 0.86
CHMP4B-201ENST00000217402 PAFAH1B2P68402 229 aa20.44■□□□□ 0.86
CHMP4B-201ENST00000217402 ZNF503Q96F45 646 aa20.44■□□□□ 0.86
CHMP4B-201ENST00000217402 C17orf77Q96MU5 243 aa20.44■□□□□ 0.86
CHMP4B-201ENST00000217402 STAG3L2P0CL84 134 aa20.43■□□□□ 0.86
CHMP4B-201ENST00000217402 STAG3L3P0CL85 134 aa20.43■□□□□ 0.86
CHMP4B-201ENST00000217402 ARL14EPLP0DKL9 152 aa20.43■□□□□ 0.86
CHMP4B-201ENST00000217402 IGLC2P0DOY2 106 aa20.43■□□□□ 0.86
CHMP4B-201ENST00000217402 LCN15Q6UWW0 184 aa20.43■□□□□ 0.86
CHMP4B-201ENST00000217402 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa20.43■□□□□ 0.86
CHMP4B-201ENST00000217402 H3BQ15 152 aa20.42■□□□□ 0.86
CHMP4B-201ENST00000217402 RAB5CP51148 216 aa20.42■□□□□ 0.86
CHMP4B-201ENST00000217402 UBE2L3P68036 154 aaKnown RBP20.42■□□□□ 0.86
CHMP4B-201ENST00000217402 DPPA3Q6W0C5 159 aa20.42■□□□□ 0.86
CHMP4B-201ENST00000217402 KRTAP10-11P60412 298 aa20.42■□□□□ 0.86
CHMP4B-201ENST00000217402 DCANP1Q8TF63 244 aa20.42■□□□□ 0.86
CHMP4B-201ENST00000217402 A0A087X0K7 114 aa20.41■□□□□ 0.86
CHMP4B-201ENST00000217402 MAP1LC3B2A6NCE7 125 aa20.41■□□□□ 0.86
CHMP4B-201ENST00000217402 OR4C46A6NHA9 309 aa20.41■□□□□ 0.86
CHMP4B-201ENST00000217402 FGF8P55075 233 aaPredicted RBP20.41■□□□□ 0.86
CHMP4B-201ENST00000217402 PQLC2Q6ZP29 291 aa20.41■□□□□ 0.86
CHMP4B-201ENST00000217402 IQCF2Q8IXL9 164 aa20.41■□□□□ 0.86
CHMP4B-201ENST00000217402 BLNKQ8WV28 456 aa20.41■□□□□ 0.86
CHMP4B-201ENST00000217402 RNF141Q8WVD5 230 aa20.41■□□□□ 0.86
CHMP4B-201ENST00000217402 FXYD5Q96DB9 178 aa20.41■□□□□ 0.86
CHMP4B-201ENST00000217402 MAP1LC3BQ9GZQ8 125 aa20.41■□□□□ 0.86
CHMP4B-201ENST00000217402 HRH4Q9H3N8 390 aa20.41■□□□□ 0.86
CHMP4B-201ENST00000217402 ZNF586Q9NXT0 402 aa20.41■□□□□ 0.86
CHMP4B-201ENST00000217402 ZNF256Q9Y2P7 627 aaPredicted RBP20.41■□□□□ 0.86
CHMP4B-201ENST00000217402 EGFEM1PQ0D2K5 195 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 386.2 ms