RNA–Protein interactions for RNA: ENST00000216840.10

RABGGTA-201, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-201ENST00000216840 RNF24Q9Y225 148 aa13.41□□□□□ -0.26
RABGGTA-201ENST00000216840 KLF12Q9Y4X4 402 aa13.41□□□□□ -0.26
RABGGTA-201ENST00000216840 TRBV19A0A075B6N1 114 aa13.4□□□□□ -0.26
RABGGTA-201ENST00000216840 AP4M1O00189 453 aa13.4□□□□□ -0.26
RABGGTA-201ENST00000216840 CLEC3BP05452 202 aa13.4□□□□□ -0.26
RABGGTA-201ENST00000216840 MGST1P10620 155 aaKnown RBP13.4□□□□□ -0.26
RABGGTA-201ENST00000216840 C17orf77Q96MU5 243 aa13.4□□□□□ -0.26
RABGGTA-201ENST00000216840 ATG101Q9BSB4 218 aa13.4□□□□□ -0.26
RABGGTA-201ENST00000216840 RNASE7Q9H1E1 156 aaKnown RBP13.4□□□□□ -0.26
RABGGTA-201ENST00000216840 OSTCQ9NRP0 149 aa13.4□□□□□ -0.26
RABGGTA-201ENST00000216840 IL36BQ9NZH7 164 aa13.4□□□□□ -0.26
RABGGTA-201ENST00000216840 RPH3ALQ9UNE2 315 aa13.4□□□□□ -0.26
RABGGTA-201ENST00000216840 CSPG4Q6UVK1 2322 aa13.4□□□□□ -0.26
RABGGTA-201ENST00000216840 ABCA12Q86UK0 2595 aa13.4□□□□□ -0.26
RABGGTA-201ENST00000216840 M0QZK8 103 aa13.4□□□□□ -0.27
RABGGTA-201ENST00000216840 UBE2CO00762 179 aa13.4□□□□□ -0.27
RABGGTA-201ENST00000216840 IGHG2P01859 326 aa13.4□□□□□ -0.27
RABGGTA-201ENST00000216840 IGF1P05019 195 aa13.4□□□□□ -0.27
RABGGTA-201ENST00000216840 IGHV4-31P0DP07 118 aa13.4□□□□□ -0.27
RABGGTA-201ENST00000216840 BAGE2Q86Y30 109 aa13.4□□□□□ -0.27
RABGGTA-201ENST00000216840 EXOC3-AS1Q8N2X6 119 aa13.4□□□□□ -0.27
RABGGTA-201ENST00000216840 EEF1AKMT3Q96AZ1 226 aa13.4□□□□□ -0.27
RABGGTA-201ENST00000216840 PITPNC1Q9UKF7 332 aa13.4□□□□□ -0.27
RABGGTA-201ENST00000216840 TCRAP04437 139 aa13.39□□□□□ -0.27
RABGGTA-201ENST00000216840 GAR1Q9NY12 217 aaKnown RBP13.39□□□□□ -0.27
RABGGTA-201ENST00000216840 CHD6Q8TD26 2715 aa13.39□□□□□ -0.27
RABGGTA-201ENST00000216840 TRGC1P0CF51 173 aa13.38□□□□□ -0.27
RABGGTA-201ENST00000216840 UBE2G1P62253 170 aa13.38□□□□□ -0.27
RABGGTA-201ENST00000216840 FABP9Q0Z7S8 132 aa13.38□□□□□ -0.27
RABGGTA-201ENST00000216840 CLEC19AQ6UXS0 136 aa13.38□□□□□ -0.27
RABGGTA-201ENST00000216840 BTF3L4Q96K17 158 aa13.38□□□□□ -0.27
RABGGTA-201ENST00000216840 RABAC1Q9UI14 185 aa13.38□□□□□ -0.27
RABGGTA-201ENST00000216840 TRBV7-1A0A0A6YYK4 115 aa13.38□□□□□ -0.27
RABGGTA-201ENST00000216840 IGHV3-35A0A0C4DH35 117 aa13.38□□□□□ -0.27
RABGGTA-201ENST00000216840 ZNF320A2RRD8 509 aa13.38□□□□□ -0.27
RABGGTA-201ENST00000216840 PLA2G2AP14555 144 aa13.38□□□□□ -0.27
RABGGTA-201ENST00000216840 BLCAPP62952 87 aa13.38□□□□□ -0.27
RABGGTA-201ENST00000216840 ATP5G2Q06055 141 aa13.38□□□□□ -0.27
RABGGTA-201ENST00000216840 DEFB112Q30KQ8 113 aa13.38□□□□□ -0.27
RABGGTA-201ENST00000216840 TOMM20LQ6UXN7 152 aa13.38□□□□□ -0.27
RABGGTA-201ENST00000216840 SGK494Q96LW2 274 aa13.38□□□□□ -0.27
RABGGTA-201ENST00000216840 S100A9P06702 114 aaKnown RBP13.37□□□□□ -0.27
RABGGTA-201ENST00000216840 IBA57Q5T440 356 aaKnown RBP13.37□□□□□ -0.27
RABGGTA-201ENST00000216840 SIGLEC15Q6ZMC9 328 aa13.37□□□□□ -0.27
RABGGTA-201ENST00000216840 FMC1Q96HJ9 113 aa13.37□□□□□ -0.27
RABGGTA-201ENST00000216840 ZFAND3Q9H8U3 227 aa13.37□□□□□ -0.27
RABGGTA-201ENST00000216840 NAV2Q8IVL1 2488 aa13.37□□□□□ -0.27
RABGGTA-201ENST00000216840 FAM223BA6NKX1 122 aa13.36□□□□□ -0.27
RABGGTA-201ENST00000216840 BMPR1BO00238 502 aa13.36□□□□□ -0.27
RABGGTA-201ENST00000216840 AKR1D1P51857 326 aa13.36□□□□□ -0.27
RABGGTA-201ENST00000216840 NDUFA6P56556 154 aa13.36□□□□□ -0.27
RABGGTA-201ENST00000216840 RPEL1Q2QD12 228 aa13.36□□□□□ -0.27
RABGGTA-201ENST00000216840 Q6ZS46 218 aa13.36□□□□□ -0.27
RABGGTA-201ENST00000216840 FAM223AQ8IWN6 122 aa13.36□□□□□ -0.27
RABGGTA-201ENST00000216840 LYPD1Q8N2G4 141 aa13.36□□□□□ -0.27
RABGGTA-201ENST00000216840 TRAV9-1A0A075B6T8 112 aa13.36□□□□□ -0.27
RABGGTA-201ENST00000216840 IGHV3OR16-8A0A075B7F1 116 aa13.36□□□□□ -0.27
RABGGTA-201ENST00000216840 PPIFP30405 207 aaKnown RBP13.36□□□□□ -0.27
RABGGTA-201ENST00000216840 KRTAP1-3Q8IUG1 177 aa13.36□□□□□ -0.27
RABGGTA-201ENST00000216840 CMTM2Q8TAZ6 248 aa13.36□□□□□ -0.27
RABGGTA-201ENST00000216840 TMEM190Q8WZ59 177 aa13.36□□□□□ -0.27
RABGGTA-201ENST00000216840 NOL4LQ96MY1 436 aaPredicted RBP13.36□□□□□ -0.27
RABGGTA-201ENST00000216840 GNB4Q9HAV0 340 aa13.36□□□□□ -0.27
RABGGTA-201ENST00000216840 DOPEY2Q9Y3R5 2298 aa13.36□□□□□ -0.27
RABGGTA-201ENST00000216840 FSHBP01225 129 aa13.35□□□□□ -0.27
RABGGTA-201ENST00000216840 TRGV3P03979 118 aa13.35□□□□□ -0.27
RABGGTA-201ENST00000216840 ACTL10Q5JWF8 245 aa13.35□□□□□ -0.27
RABGGTA-201ENST00000216840 FAM231DQ6ZW35 169 aa13.35□□□□□ -0.27
RABGGTA-201ENST00000216840 MBD6Q96DN6 1003 aa13.35□□□□□ -0.27
RABGGTA-201ENST00000216840 SMIM12Q96EX1 92 aa13.35□□□□□ -0.27
RABGGTA-201ENST00000216840 Q96MF0 132 aa13.35□□□□□ -0.27
RABGGTA-201ENST00000216840 GPR82Q96P67 336 aa13.35□□□□□ -0.27
RABGGTA-201ENST00000216840 LTAP01374 205 aa13.35□□□□□ -0.27
RABGGTA-201ENST00000216840 IGHV4-59P01825 116 aa13.35□□□□□ -0.27
RABGGTA-201ENST00000216840 RPL7P18124 248 aaKnown RBP13.35□□□□□ -0.27
RABGGTA-201ENST00000216840 RPL15P61313 204 aaKnown RBP13.35□□□□□ -0.27
RABGGTA-201ENST00000216840 PDE6HQ13956 83 aa13.35□□□□□ -0.27
RABGGTA-201ENST00000216840 ATP6V0BQ99437 205 aa13.35□□□□□ -0.27
RABGGTA-201ENST00000216840 MLST8Q9BVC4 326 aa13.35□□□□□ -0.27
RABGGTA-201ENST00000216840 PRRC2AP48634 2157 aaKnown RBP13.34□□□□□ -0.27
RABGGTA-201ENST00000216840 BRI3O95415 125 aa13.34□□□□□ -0.27
RABGGTA-201ENST00000216840 GOLT1AQ6ZVE7 132 aa13.34□□□□□ -0.27
RABGGTA-201ENST00000216840 TENM4Q6N022 2769 aa13.34□□□□□ -0.27
RABGGTA-201ENST00000216840 J3QKU1 62 aa13.33□□□□□ -0.27
RABGGTA-201ENST00000216840 HOXA5P20719 270 aa13.33□□□□□ -0.27
RABGGTA-201ENST00000216840 S100A7P31151 101 aa13.33□□□□□ -0.27
RABGGTA-201ENST00000216840 PRSS57Q6UWY2 283 aa13.33□□□□□ -0.27
RABGGTA-201ENST00000216840 APCP25054 2843 aa13.33□□□□□ -0.28
RABGGTA-201ENST00000216840 CLPSL1A2RUU4 121 aa13.33□□□□□ -0.28
RABGGTA-201ENST00000216840 ZNF705GA8MUZ8 300 aaPredicted RBP13.33□□□□□ -0.28
RABGGTA-201ENST00000216840 H3BUA1 57 aa13.33□□□□□ -0.28
RABGGTA-201ENST00000216840 IGLV2-11P01706 119 aa13.33□□□□□ -0.28
RABGGTA-201ENST00000216840 IER3P46695 156 aa13.33□□□□□ -0.28
RABGGTA-201ENST00000216840 TPPP2P59282 170 aa13.33□□□□□ -0.28
RABGGTA-201ENST00000216840 HIST2H2BCQ6DN03 193 aa13.33□□□□□ -0.28
RABGGTA-201ENST00000216840 OR8I2Q8N0Y5 310 aa13.33□□□□□ -0.28
RABGGTA-201ENST00000216840 SERTAD4Q9NUC0 356 aa13.33□□□□□ -0.28
RABGGTA-201ENST00000216840 SMAD5-AS1Q9Y6J3 95 aa13.33□□□□□ -0.28
RABGGTA-201ENST00000216840 TRAV8-1A0A0A6YYK1 113 aa13.32□□□□□ -0.28
RABGGTA-201ENST00000216840 Q86TA4 180 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms