RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 DLEU1O43261 78 aa12.13□□□□□ -0.47
SPTLC2-201ENST00000216484 CEACAM1P13688 526 aa12.13□□□□□ -0.47
SPTLC2-201ENST00000216484 TMEM219Q86XT9 240 aa12.13□□□□□ -0.47
SPTLC2-201ENST00000216484 TRAV40A0A0B4J280 105 aa12.12□□□□□ -0.47
SPTLC2-201ENST00000216484 NDPQ00604 133 aa12.12□□□□□ -0.47
SPTLC2-201ENST00000216484 A0A087WWL8 130 aa12.12□□□□□ -0.47
SPTLC2-201ENST00000216484 TIMP3P35625 211 aa12.12□□□□□ -0.47
SPTLC2-201ENST00000216484 EREGO14944 169 aa12.12□□□□□ -0.47
SPTLC2-201ENST00000216484 WFDC6Q9BQY6 131 aa12.12□□□□□ -0.47
SPTLC2-201ENST00000216484 C14orf178Q8N769 122 aaPredicted RBP12.12□□□□□ -0.47
SPTLC2-201ENST00000216484 LINC00527Q9UJ94 153 aa12.12□□□□□ -0.47
SPTLC2-201ENST00000216484 WNT2P09544 360 aa12.12□□□□□ -0.47
SPTLC2-201ENST00000216484 COX6A1P12074 109 aa12.12□□□□□ -0.47
SPTLC2-201ENST00000216484 UCP1P25874 307 aa12.12□□□□□ -0.47
SPTLC2-201ENST00000216484 MPV17L2Q567V2 206 aa12.12□□□□□ -0.47
SPTLC2-201ENST00000216484 DEFB105AQ8NG35 78 aa12.12□□□□□ -0.47
SPTLC2-201ENST00000216484 CCL3L1P16619 93 aa12.12□□□□□ -0.47
SPTLC2-201ENST00000216484 TAL2Q16559 108 aa12.12□□□□□ -0.47
SPTLC2-201ENST00000216484 TRBV20-1A0A075B6N2 111 aa12.11□□□□□ -0.47
SPTLC2-201ENST00000216484 SLC25A48Q6ZT89 311 aaKnown RBP12.11□□□□□ -0.47
SPTLC2-201ENST00000216484 SLC25A39Q9BZJ4 359 aaPredicted RBP12.11□□□□□ -0.47
SPTLC2-201ENST00000216484 PTPRQQ9UMZ3 2332 aa12.11□□□□□ -0.47
SPTLC2-201ENST00000216484 TMEM14DPA8MWL7 114 aa12.11□□□□□ -0.47
SPTLC2-201ENST00000216484 CDKN1AP38936 164 aa12.11□□□□□ -0.47
SPTLC2-201ENST00000216484 CMC4P56277 68 aaPredicted RBP12.11□□□□□ -0.47
SPTLC2-201ENST00000216484 LYZL1Q6UWQ5 148 aa12.11□□□□□ -0.47
SPTLC2-201ENST00000216484 DEFB130BP0DP73 79 aa12.11□□□□□ -0.47
SPTLC2-201ENST00000216484 DEFB130AP0DP74 79 aa12.11□□□□□ -0.47
SPTLC2-201ENST00000216484 SCRT2Q9NQ03 307 aa12.11□□□□□ -0.47
SPTLC2-201ENST00000216484 SHANK3Q9BYB0 1731 aa12.11□□□□□ -0.47
SPTLC2-201ENST00000216484 GAS1P54826 345 aa12.11□□□□□ -0.47
SPTLC2-201ENST00000216484 SPSB3Q6PJ21 355 aa12.11□□□□□ -0.47
SPTLC2-201ENST00000216484 TM2D1Q9BX74 207 aa12.11□□□□□ -0.47
SPTLC2-201ENST00000216484 SMKR1H3BMG3 65 aa12.11□□□□□ -0.47
SPTLC2-201ENST00000216484 NDUFC2O95298 119 aa12.11□□□□□ -0.47
SPTLC2-201ENST00000216484 CELA3BP08861 270 aa12.11□□□□□ -0.47
SPTLC2-201ENST00000216484 C18orf12Q96KH6 178 aa12.11□□□□□ -0.47
SPTLC2-201ENST00000216484 IGKV1-8A0A0C4DH67 115 aa12.11□□□□□ -0.47
SPTLC2-201ENST00000216484 UPK2O00526 184 aa12.11□□□□□ -0.47
SPTLC2-201ENST00000216484 NUP35Q8NFH5 326 aa12.1□□□□□ -0.47
SPTLC2-201ENST00000216484 PLXNA3P51805 1871 aa12.1□□□□□ -0.47
SPTLC2-201ENST00000216484 MORN2Q502X0 79 aa12.1□□□□□ -0.47
SPTLC2-201ENST00000216484 SMRP1Q8NCR6 262 aa12.1□□□□□ -0.47
SPTLC2-201ENST00000216484 AMBPP02760 352 aa12.1□□□□□ -0.47
SPTLC2-201ENST00000216484 TNRC6CQ9HCJ0 1690 aaKnown RBP12.1□□□□□ -0.47
SPTLC2-201ENST00000216484 C22orf46C9J442 243 aa12.1□□□□□ -0.47
SPTLC2-201ENST00000216484 SYS1-DBNDD2H3BUS1 97 aa12.1□□□□□ -0.47
SPTLC2-201ENST00000216484 RS1O15537 224 aa12.1□□□□□ -0.47
SPTLC2-201ENST00000216484 IGHV2OR16-5A0A0B4J2B6 119 aa12.1□□□□□ -0.47
SPTLC2-201ENST00000216484 MCRIP2Q9BUT9 160 aaKnown RBP12.1□□□□□ -0.47
SPTLC2-201ENST00000216484 TMEM133Q9H2Q1 129 aa12.1□□□□□ -0.47
SPTLC2-201ENST00000216484 TEX38Q6PEX7 206 aa12.09□□□□□ -0.47
SPTLC2-201ENST00000216484 PIN1P1O15428 100 aa12.09□□□□□ -0.47
SPTLC2-201ENST00000216484 CFHR3Q02985 330 aa12.09□□□□□ -0.47
SPTLC2-201ENST00000216484 MBNL3Q9NUK0 354 aaKnown RBP12.09□□□□□ -0.47
SPTLC2-201ENST00000216484 BMPERQ8N8U9 685 aa12.09□□□□□ -0.47
SPTLC2-201ENST00000216484 YPEL1O60688 119 aa12.09□□□□□ -0.47
SPTLC2-201ENST00000216484 CRLF1O75462 422 aa12.09□□□□□ -0.47
SPTLC2-201ENST00000216484 YPEL2Q96QA6 119 aa12.09□□□□□ -0.47
SPTLC2-201ENST00000216484 ZNF138P52744 262 aa12.09□□□□□ -0.47
SPTLC2-201ENST00000216484 HIST3H2BBQ8N257 126 aa12.09□□□□□ -0.47
SPTLC2-201ENST00000216484 TINCRA0A1B0GVN0 87 aa12.09□□□□□ -0.47
SPTLC2-201ENST00000216484 LILRA6Q6PI73 481 aa12.09□□□□□ -0.47
SPTLC2-201ENST00000216484 TRBV5-3A0A0A0MS03 114 aa12.08□□□□□ -0.47
SPTLC2-201ENST00000216484 C17orf100A8MU93 164 aa12.08□□□□□ -0.47
SPTLC2-201ENST00000216484 WFDC9Q8NEX5 89 aa12.08□□□□□ -0.47
SPTLC2-201ENST00000216484 MGAMO43451 1857 aa12.08□□□□□ -0.48
SPTLC2-201ENST00000216484 NAV3Q8IVL0 2385 aa12.08□□□□□ -0.48
SPTLC2-201ENST00000216484 SH2D1AO60880 128 aa12.08□□□□□ -0.48
SPTLC2-201ENST00000216484 OR9G9P0C7N8 305 aa12.08□□□□□ -0.48
SPTLC2-201ENST00000216484 FOXG1P55316 489 aaPredicted RBP12.08□□□□□ -0.48
SPTLC2-201ENST00000216484 LY6G5BQ8NDX9 201 aa12.08□□□□□ -0.48
SPTLC2-201ENST00000216484 KLHL30-AS1Q8NEE0 82 aa12.08□□□□□ -0.48
SPTLC2-201ENST00000216484 TRBV7-1A0A0A6YYK4 115 aa12.07□□□□□ -0.48
SPTLC2-201ENST00000216484 ZNF497Q6ZNH5 498 aa12.07□□□□□ -0.48
SPTLC2-201ENST00000216484 GZMMP51124 257 aa12.07□□□□□ -0.48
SPTLC2-201ENST00000216484 C1orf194Q5T5A4 169 aa12.07□□□□□ -0.48
SPTLC2-201ENST00000216484 C8orf31Q8N9H6 132 aa12.07□□□□□ -0.48
SPTLC2-201ENST00000216484 C1QTNF4Q9BXJ3 329 aa12.07□□□□□ -0.48
SPTLC2-201ENST00000216484 RPUSD1Q9UJJ7 312 aaKnown RBP12.07□□□□□ -0.48
SPTLC2-201ENST00000216484 F5H768 121 aa12.07□□□□□ -0.48
SPTLC2-201ENST00000216484 FGF6P10767 208 aa12.07□□□□□ -0.48
SPTLC2-201ENST00000216484 PSG7Q13046 419 aa12.07□□□□□ -0.48
SPTLC2-201ENST00000216484 C14orf132Q9NPU4 83 aa12.07□□□□□ -0.48
SPTLC2-201ENST00000216484 PRCDQ00LT1 54 aa12.06□□□□□ -0.48
SPTLC2-201ENST00000216484 CXCL1P09341 107 aa12.06□□□□□ -0.48
SPTLC2-201ENST00000216484 KLF5Q13887 457 aaPredicted RBP12.06□□□□□ -0.48
SPTLC2-201ENST00000216484 Q8TAT8 98 aa12.06□□□□□ -0.48
SPTLC2-201ENST00000216484 TIMM23O14925 209 aa12.06□□□□□ -0.48
SPTLC2-201ENST00000216484 SHISA9B4DS77 424 aa12.06□□□□□ -0.48
SPTLC2-201ENST00000216484 LIME1Q9H400 295 aa12.06□□□□□ -0.48
SPTLC2-201ENST00000216484 STPG4Q8N801 248 aa12.06□□□□□ -0.48
SPTLC2-201ENST00000216484 SMIM2Q9BVW6 85 aa12.06□□□□□ -0.48
SPTLC2-201ENST00000216484 ANKRD29Q8N6D5 301 aa12.05□□□□□ -0.48
SPTLC2-201ENST00000216484 LINC00477Q96M19 166 aa12.05□□□□□ -0.48
SPTLC2-201ENST00000216484 TSSC4Q9Y5U2 329 aaPredicted RBP12.05□□□□□ -0.48
SPTLC2-201ENST00000216484 CSPG4Q6UVK1 2322 aa12.05□□□□□ -0.48
SPTLC2-201ENST00000216484 ZC2HC1BQ5TFG8 222 aa12.05□□□□□ -0.48
SPTLC2-201ENST00000216484 CD200R1LQ6Q8B3 271 aa12.05□□□□□ -0.48
SPTLC2-201ENST00000216484 FAM90A1Q86YD7 464 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms