RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 A0A0G2JK05 382 aa5.05□□□□□ -1.6
VPS13D-201ENST00000011700 EGR2P11161 476 aaPredicted RBP5.05□□□□□ -1.6
VPS13D-201ENST00000011700 C18orf15Q96N68 181 aa5.05□□□□□ -1.6
VPS13D-201ENST00000011700 AURKAIP1Q9NWT8 199 aaPredicted RBP5.05□□□□□ -1.6
VPS13D-201ENST00000011700 A0A1B0GWJ7 208 aa5.05□□□□□ -1.6
VPS13D-201ENST00000011700 MBNL3Q9NUK0 354 aaKnown RBP5.05□□□□□ -1.6
VPS13D-201ENST00000011700 SRRM5B3KS81 715 aa5.05□□□□□ -1.6
VPS13D-201ENST00000011700 C12orf77C9JDV5 145 aa5.05□□□□□ -1.6
VPS13D-201ENST00000011700 STPG4Q8N801 248 aa5.05□□□□□ -1.6
VPS13D-201ENST00000011700 ATP6V0BQ99437 205 aa5.05□□□□□ -1.6
VPS13D-201ENST00000011700 PSG3Q16557 428 aa5.05□□□□□ -1.6
VPS13D-201ENST00000011700 NRTNQ99748 197 aa5.05□□□□□ -1.6
VPS13D-201ENST00000011700 SAA2-SAA4A0A096LPE2 208 aa5.04□□□□□ -1.6
VPS13D-201ENST00000011700 SHISA8B8ZZ34 492 aa5.04□□□□□ -1.6
VPS13D-201ENST00000011700 H0YIZ8 118 aa5.04□□□□□ -1.6
VPS13D-201ENST00000011700 SAA2P0DJI9 122 aaPredicted RBP5.04□□□□□ -1.6
VPS13D-201ENST00000011700 PRSS12P56730 875 aa5.04□□□□□ -1.6
VPS13D-201ENST00000011700 NEUROG3Q9Y4Z2 214 aa5.04□□□□□ -1.6
VPS13D-201ENST00000011700 MSGN1A6NI15 193 aa5.04□□□□□ -1.6
VPS13D-201ENST00000011700 TIMM23O14925 209 aa5.04□□□□□ -1.6
VPS13D-201ENST00000011700 IGKV1D-16P01601 117 aa5.04□□□□□ -1.6
VPS13D-201ENST00000011700 IGFBPL1Q8WX77 278 aa5.04□□□□□ -1.6
VPS13D-201ENST00000011700 FBXL15Q9H469 300 aa5.04□□□□□ -1.6
VPS13D-201ENST00000011700 HCSTQ9UBK5 93 aa5.04□□□□□ -1.6
VPS13D-201ENST00000011700 IGKV1D-42A0A075B6H8 117 aa5.04□□□□□ -1.6
VPS13D-201ENST00000011700 TRAV5A0A0B4J249 113 aa5.04□□□□□ -1.6
VPS13D-201ENST00000011700 SCO2A0A1W2PP80 73 aa5.04□□□□□ -1.6
VPS13D-201ENST00000011700 BSPH1Q075Z2 132 aa5.04□□□□□ -1.6
VPS13D-201ENST00000011700 PLAC1Q9HBJ0 212 aa5.04□□□□□ -1.6
VPS13D-201ENST00000011700 A0A1W2PR80 420 aa5.04□□□□□ -1.6
VPS13D-201ENST00000011700 CSRP1P21291 193 aaKnown RBP5.04□□□□□ -1.6
VPS13D-201ENST00000011700 GATA2P23769 480 aaPredicted RBP5.04□□□□□ -1.6
VPS13D-201ENST00000011700 C9JQL5 133 aa5.04□□□□□ -1.6
VPS13D-201ENST00000011700 DLEU1O43261 78 aa5.04□□□□□ -1.6
VPS13D-201ENST00000011700 PAX4O43316 350 aa5.04□□□□□ -1.6
VPS13D-201ENST00000011700 ASCL4Q6XD76 172 aa5.04□□□□□ -1.6
VPS13D-201ENST00000011700 HIST3H2BBQ8N257 126 aa5.04□□□□□ -1.6
VPS13D-201ENST00000011700 PIEZO2Q9H5I5 2752 aa5.04□□□□□ -1.6
VPS13D-201ENST00000011700 PEBP1P30086 187 aaKnown RBP5.04□□□□□ -1.6
VPS13D-201ENST00000011700 CSRP3P50461 194 aa5.04□□□□□ -1.6
VPS13D-201ENST00000011700 WFDC3Q8IUB2 231 aa5.04□□□□□ -1.6
VPS13D-201ENST00000011700 ZMAT4Q9H898 229 aa5.04□□□□□ -1.6
VPS13D-201ENST00000011700 TOMM7Q9P0U1 55 aa5.04□□□□□ -1.6
VPS13D-201ENST00000011700 MED19A0JLT2 244 aaPredicted RBP5.04□□□□□ -1.6
VPS13D-201ENST00000011700 TRACP01848 142 aa5.04□□□□□ -1.6
VPS13D-201ENST00000011700 SAA1P0DJI8 122 aaPredicted RBP5.04□□□□□ -1.6
VPS13D-201ENST00000011700 ITLN2Q8WWU7 325 aaPredicted RBP5.04□□□□□ -1.6
VPS13D-201ENST00000011700 C20orf78Q9BR46 151 aa5.04□□□□□ -1.6
VPS13D-201ENST00000011700 C6orf226Q5I0X4 101 aa5.03□□□□□ -1.6
VPS13D-201ENST00000011700 PSG8Q9UQ74 426 aa5.03□□□□□ -1.6
VPS13D-201ENST00000011700 WDR83OSQ9Y284 106 aa5.03□□□□□ -1.6
VPS13D-201ENST00000011700 TMEM14EPQ6UXP3 125 aa5.03□□□□□ -1.6
VPS13D-201ENST00000011700 FAM231DQ6ZW35 169 aa5.03□□□□□ -1.6
VPS13D-201ENST00000011700 SNHG12Q9BXW3 62 aa5.03□□□□□ -1.6
VPS13D-201ENST00000011700 J3QRE1 110 aa5.03□□□□□ -1.6
VPS13D-201ENST00000011700 LINC01551Q86U37 167 aa5.03□□□□□ -1.6
VPS13D-201ENST00000011700 IGHV3-13P01766 116 aa5.03□□□□□ -1.6
VPS13D-201ENST00000011700 IGHV3-7P01780 117 aa5.03□□□□□ -1.6
VPS13D-201ENST00000011700 FUSP35637 526 aaKnown RBP eCLIP5.03□□□□□ -1.6
VPS13D-201ENST00000011700 PCOLCEQ15113 449 aa5.03□□□□□ -1.6
VPS13D-201ENST00000011700 ZNF492Q9P255 531 aa5.03□□□□□ -1.6
VPS13D-201ENST00000011700 IGKV3D-11A0A0A0MRZ8 115 aa5.03□□□□□ -1.6
VPS13D-201ENST00000011700 SPINK8P0C7L1 97 aa5.03□□□□□ -1.6
VPS13D-201ENST00000011700 PATE4P0C8F1 98 aa5.03□□□□□ -1.6
VPS13D-201ENST00000011700 HERVK_113P63121 156 aa5.03□□□□□ -1.6
VPS13D-201ENST00000011700 HERV-K104P63124 156 aa5.03□□□□□ -1.6
VPS13D-201ENST00000011700 ZNF71Q9NQZ8 489 aaPredicted RBP5.03□□□□□ -1.6
VPS13D-201ENST00000011700 PSG1P11464 419 aa5.03□□□□□ -1.6
VPS13D-201ENST00000011700 CD300CQ08708 224 aa5.03□□□□□ -1.6
VPS13D-201ENST00000011700 APOC4P55056 127 aa5.03□□□□□ -1.6
VPS13D-201ENST00000011700 FOXA3P55318 350 aaPredicted RBP5.03□□□□□ -1.6
VPS13D-201ENST00000011700 TMEM256Q8N2U0 113 aa5.03□□□□□ -1.6
VPS13D-201ENST00000011700 SPSB2Q99619 263 aa5.03□□□□□ -1.6
VPS13D-201ENST00000011700 TMEM14CQ9P0S9 112 aa5.03□□□□□ -1.6
VPS13D-201ENST00000011700 ANAPC10Q9UM13 185 aa5.03□□□□□ -1.6
VPS13D-201ENST00000011700 A0A1B0GUS0 222 aa5.03□□□□□ -1.6
VPS13D-201ENST00000011700 RBAKDNA6NC62 111 aa5.03□□□□□ -1.6
VPS13D-201ENST00000011700 PRR19A6NJB7 356 aa5.03□□□□□ -1.6
VPS13D-201ENST00000011700 IGHV4-39P01824 125 aa5.03□□□□□ -1.6
VPS13D-201ENST00000011700 CHCHD5Q9BSY4 110 aa5.03□□□□□ -1.6
VPS13D-201ENST00000011700 NAV2Q8IVL1 2488 aa5.03□□□□□ -1.6
VPS13D-201ENST00000011700 CGB1A6NKQ9 187 aa5.02□□□□□ -1.61
VPS13D-201ENST00000011700 I3L3M4 83 aa5.02□□□□□ -1.61
VPS13D-201ENST00000011700 TMEM155Q4W5P6 130 aa5.02□□□□□ -1.61
VPS13D-201ENST00000011700 C9orf153Q5TBE3 101 aa5.02□□□□□ -1.61
VPS13D-201ENST00000011700 SIGLEC12Q96PQ1 595 aa5.02□□□□□ -1.61
VPS13D-201ENST00000011700 AKIRIN1Q9H9L7 192 aaPredicted RBP5.02□□□□□ -1.61
VPS13D-201ENST00000011700 H3BUA1 57 aa5.02□□□□□ -1.61
VPS13D-201ENST00000011700 J3KRW8 73 aa5.02□□□□□ -1.61
VPS13D-201ENST00000011700 ATP5EP56381 51 aaPredicted RBP5.02□□□□□ -1.61
VPS13D-201ENST00000011700 LINC00158P58513 81 aa5.02□□□□□ -1.61
VPS13D-201ENST00000011700 HIST1H4AP62805 103 aaKnown RBP5.02□□□□□ -1.61
VPS13D-201ENST00000011700 PYGO2Q9BRQ0 406 aa5.02□□□□□ -1.61
VPS13D-201ENST00000011700 LHFPL1Q86WI0 220 aa5.02□□□□□ -1.61
VPS13D-201ENST00000011700 LIME1Q9H400 295 aa5.02□□□□□ -1.61
VPS13D-201ENST00000011700 CECR9P0C854 216 aa5.02□□□□□ -1.61
VPS13D-201ENST00000011700 RHOHQ15669 191 aa5.02□□□□□ -1.61
VPS13D-201ENST00000011700 UBE2DNLQ8IWF7 75 aa5.02□□□□□ -1.61
VPS13D-201ENST00000011700 GUSBP1Q15486 140 aa5.02□□□□□ -1.61
VPS13D-201ENST00000011700 C15orf32Q32M92 178 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 131.2 ms