RNA–Protein interactions for RNA: ENSMUST00000173369.1

Trim39-205, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

TSL 1 (best) BASIC

Gene Trim39, Length 2,914 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-205ENSMUST00000173369 Zcchc10Q9CX48 178 aa6.88□□□□□ -1.31
Trim39-205ENSMUST00000173369 Hist3h2baQ9D2U9 126 aa6.88□□□□□ -1.31
Trim39-205ENSMUST00000173369 Prr30Q9D9B7 401 aa6.88□□□□□ -1.31
Trim39-205ENSMUST00000173369 Znf593Q9DB42 134 aaKnown RBP6.88□□□□□ -1.31
Trim39-205ENSMUST00000173369 9530002B09RikQ9EPV7 135 aa6.88□□□□□ -1.31
Trim39-205ENSMUST00000173369 Plekha3Q9ERS4 297 aa6.88□□□□□ -1.31
Trim39-205ENSMUST00000173369 Ccl8Q9Z121 97 aa6.88□□□□□ -1.31
Trim39-205ENSMUST00000173369 Mrgpra9A0A140T8U8 332 aa6.88□□□□□ -1.31
Trim39-205ENSMUST00000173369 Olfr1245A0A1L1SQJ6 307 aa6.88□□□□□ -1.31
Trim39-205ENSMUST00000173369 FggyA2AJL3 552 aa6.88□□□□□ -1.31
Trim39-205ENSMUST00000173369 Gm5239D3YYZ2 122 aa6.88□□□□□ -1.31
Trim39-205ENSMUST00000173369 Rps16P14131 146 aaKnown RBP6.88□□□□□ -1.31
Trim39-205ENSMUST00000173369 Tas2r41P59532 308 aa6.88□□□□□ -1.31
Trim39-205ENSMUST00000173369 Fgf12P61329 243 aa6.88□□□□□ -1.31
Trim39-205ENSMUST00000173369 Rpl31P62900 125 aaKnown RBP6.88□□□□□ -1.31
Trim39-205ENSMUST00000173369 Eif5aP63242 154 aaKnown RBP6.88□□□□□ -1.31
Trim39-205ENSMUST00000173369 F7P70375 446 aa6.88□□□□□ -1.31
Trim39-205ENSMUST00000173369 Stx4P70452 298 aa6.88□□□□□ -1.31
Trim39-205ENSMUST00000173369 Fabp5Q05816 135 aaKnown RBP6.88□□□□□ -1.31
Trim39-205ENSMUST00000173369 StumQ0VBF8 141 aa6.88□□□□□ -1.31
Trim39-205ENSMUST00000173369 Olfr358Q7TRY5 330 aa6.88□□□□□ -1.31
Trim39-205ENSMUST00000173369 RetnlgQ8K426 117 aa6.88□□□□□ -1.31
Trim39-205ENSMUST00000173369 SccpdhQ8R127 429 aa6.88□□□□□ -1.31
Trim39-205ENSMUST00000173369 Olfr993Q8VF75 314 aa6.88□□□□□ -1.31
Trim39-205ENSMUST00000173369 Olfr983Q8VG90 315 aa6.88□□□□□ -1.31
Trim39-205ENSMUST00000173369 Tmem50bQ9D1X9 158 aa6.88□□□□□ -1.31
Trim39-205ENSMUST00000173369 Nbeal2Q6ZQA0 2742 aa6.88□□□□□ -1.31
Trim39-205ENSMUST00000173369 Rnaset2aC0HKG5 259 aa6.87□□□□□ -1.31
Trim39-205ENSMUST00000173369 Rnaset2bC0HKG6 259 aa6.87□□□□□ -1.31
Trim39-205ENSMUST00000173369 Tnfsf8P32972 239 aa6.87□□□□□ -1.31
Trim39-205ENSMUST00000173369 Vmn1r74Q8R290 304 aa6.87□□□□□ -1.31
Trim39-205ENSMUST00000173369 Olfr156Q8VGA9 318 aa6.87□□□□□ -1.31
Trim39-205ENSMUST00000173369 Olfr1270Q8VGP3 304 aa6.87□□□□□ -1.31
Trim39-205ENSMUST00000173369 Rbm39Q8VH51 530 aaKnown RBP6.87□□□□□ -1.31
Trim39-205ENSMUST00000173369 Slc33a1Q99J27 550 aa6.87□□□□□ -1.31
Trim39-205ENSMUST00000173369 Ssbp3Q9D032 388 aa6.87□□□□□ -1.31
Trim39-205ENSMUST00000173369 4930447A16RikQ9D5F6 132 aa6.87□□□□□ -1.31
Trim39-205ENSMUST00000173369 Il36bQ9D6Z6 183 aa6.87□□□□□ -1.31
Trim39-205ENSMUST00000173369 1700025F22RikQ9D9Y7 111 aa6.87□□□□□ -1.31
Trim39-205ENSMUST00000173369 Ighv14-3A0A075B5R9 117 aa6.87□□□□□ -1.31
Trim39-205ENSMUST00000173369 Igkv4-50A0A0B4J1J0 117 aa6.87□□□□□ -1.31
Trim39-205ENSMUST00000173369 Olfr1129A2AV41 314 aa6.87□□□□□ -1.31
Trim39-205ENSMUST00000173369 Tmem139E9PX92 214 aa6.87□□□□□ -1.31
Trim39-205ENSMUST00000173369 Gm3233E9Q2H5 230 aa6.87□□□□□ -1.31
Trim39-205ENSMUST00000173369 CatsperdE9Q9F6 805 aa6.87□□□□□ -1.31
Trim39-205ENSMUST00000173369 Fgf5P15656 264 aa6.87□□□□□ -1.31
Trim39-205ENSMUST00000173369 Clec12bQ149M0 275 aa6.87□□□□□ -1.31
Trim39-205ENSMUST00000173369 Slc38a8Q5HZH7 432 aa6.87□□□□□ -1.31
Trim39-205ENSMUST00000173369 Thap4Q6P3Z3 569 aa6.87□□□□□ -1.31
Trim39-205ENSMUST00000173369 Ceacam9Q78T27 234 aa6.87□□□□□ -1.31
Trim39-205ENSMUST00000173369 Olfr132Q7TRI8 313 aa6.87□□□□□ -1.31
Trim39-205ENSMUST00000173369 Olfr517Q7TRU4 314 aa6.87□□□□□ -1.31
Trim39-205ENSMUST00000173369 Agpat2Q8K3K7 278 aa6.87□□□□□ -1.31
Trim39-205ENSMUST00000173369 Slc37a1Q8R070 531 aa6.87□□□□□ -1.31
Trim39-205ENSMUST00000173369 Olfr279Q8VFD8 310 aa6.87□□□□□ -1.31
Trim39-205ENSMUST00000173369 Slc22a26Q91WJ2 552 aa6.87□□□□□ -1.31
Trim39-205ENSMUST00000173369 Ufc1Q9CR09 167 aa6.87□□□□□ -1.31
Trim39-205ENSMUST00000173369 Ly96Q9JHF9 160 aa6.87□□□□□ -1.31
Trim39-205ENSMUST00000173369 Pmaip1Q9JM54 103 aa6.87□□□□□ -1.31
Trim39-205ENSMUST00000173369 ArtnQ9Z0L2 224 aa6.87□□□□□ -1.31
Trim39-205ENSMUST00000173369 Ighv1-37A0A0A6YW32 117 aa6.87□□□□□ -1.31
Trim39-205ENSMUST00000173369 Ighv9-3A0A0B4J1J5 117 aa6.87□□□□□ -1.31
Trim39-205ENSMUST00000173369 Gm45716A0A1B0GRQ0 93 aa6.87□□□□□ -1.31
Trim39-205ENSMUST00000173369 Spink14B9EJP9 96 aa6.87□□□□□ -1.31
Trim39-205ENSMUST00000173369 Gm7849D3YX03 116 aa6.87□□□□□ -1.31
Trim39-205ENSMUST00000173369 Vmn1r224E9PWK2 298 aa6.87□□□□□ -1.31
Trim39-205ENSMUST00000173369 Mfsd4b5E9PYY6 479 aa6.87□□□□□ -1.31
Trim39-205ENSMUST00000173369 Olfr466E9Q2B9 308 aa6.87□□□□□ -1.31
Trim39-205ENSMUST00000173369 Gm9964E9Q9S5 144 aa6.87□□□□□ -1.31
Trim39-205ENSMUST00000173369 Gm21970F6XX07 295 aa6.87□□□□□ -1.31
Trim39-205ENSMUST00000173369 Prdx6O08709 224 aaKnown RBP6.87□□□□□ -1.31
Trim39-205ENSMUST00000173369 Ndufb11O09111 151 aa6.87□□□□□ -1.31
Trim39-205ENSMUST00000173369 Wnt2P21552 360 aa6.87□□□□□ -1.31
Trim39-205ENSMUST00000173369 Adrb3P25962 400 aa6.87□□□□□ -1.31
Trim39-205ENSMUST00000173369 Rab6aP35279 208 aaKnown RBP6.87□□□□□ -1.31
Trim39-205ENSMUST00000173369 Lrcol1Q3URS3 161 aa6.87□□□□□ -1.31
Trim39-205ENSMUST00000173369 Pramel5Q7TPY4 500 aa6.87□□□□□ -1.31
Trim39-205ENSMUST00000173369 Olfr1396Q7TQS8 315 aa6.87□□□□□ -1.31
Trim39-205ENSMUST00000173369 Timm21Q8CCM6 249 aa6.87□□□□□ -1.31
Trim39-205ENSMUST00000173369 4921517D22RikQ8CET0 269 aa6.87□□□□□ -1.31
Trim39-205ENSMUST00000173369 Anapc10Q8K2H6 185 aa6.87□□□□□ -1.31
Trim39-205ENSMUST00000173369 Olfr1462Q8VFW3 307 aa6.87□□□□□ -1.31
Trim39-205ENSMUST00000173369 Ube2v1Q9CZY3 147 aa6.87□□□□□ -1.31
Trim39-205ENSMUST00000173369 Aig1Q9D8B1 262 aa6.87□□□□□ -1.31
Trim39-205ENSMUST00000173369 Pgpep1Q9ESW8 209 aa6.87□□□□□ -1.31
Trim39-205ENSMUST00000173369 Herpud1Q9JJK5 391 aa6.87□□□□□ -1.31
Trim39-205ENSMUST00000173369 Mrpl39Q9JKF7 336 aa6.87□□□□□ -1.31
Trim39-205ENSMUST00000173369 Klrc3Q9QXN7 221 aa6.87□□□□□ -1.31
Trim39-205ENSMUST00000173369 Bex1Q9R224 128 aa6.87□□□□□ -1.31
Trim39-205ENSMUST00000173369 Gm21818J3KMS6 170 aa6.86□□□□□ -1.31
Trim39-205ENSMUST00000173369 Ascl5M0QWB7 188 aa6.86□□□□□ -1.31
Trim39-205ENSMUST00000173369 Tmem88bQ3TYP4 173 aa6.86□□□□□ -1.31
Trim39-205ENSMUST00000173369 Zfp936Q3ULA8 456 aa6.86□□□□□ -1.31
Trim39-205ENSMUST00000173369 Olfr874Q7TRE6 310 aa6.86□□□□□ -1.31
Trim39-205ENSMUST00000173369 Dmrt3Q80WT2 476 aa6.86□□□□□ -1.31
Trim39-205ENSMUST00000173369 Tmprss11fQ8BHM9 439 aa6.86□□□□□ -1.31
Trim39-205ENSMUST00000173369 Psg16Q8K0U8 395 aa6.86□□□□□ -1.31
Trim39-205ENSMUST00000173369 Cmss1Q9CZT6 276 aaKnown RBP6.86□□□□□ -1.31
Trim39-205ENSMUST00000173369 Tex36Q9D5N9 219 aa6.86□□□□□ -1.31
Trim39-205ENSMUST00000173369 Acot12Q9DBK0 556 aa6.86□□□□□ -1.31
Retrieved 100 of 22,080 RNA–protein pairs in 103.6 ms