RNA–Protein interactions for RNA: YLR423C

ATG17, Transcript of Scaffold protein responsible for phagophore assembly site organization, yeastyeast

Gene ATG17, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG17YLR423C UBA2P52488 636 aa7.37□□□□□ -1.23
ATG17YLR423C ACS1Q01574 713 aa7.37□□□□□ -1.23
ATG17YLR423C CIA1Q05583 330 aa7.37□□□□□ -1.23
ATG17YLR423C RGC1Q06108 1083 aaKnown RBP7.37□□□□□ -1.23
ATG17YLR423C CTT1P06115 562 aa7.36□□□□□ -1.23
ATG17YLR423C GFD2P25370 566 aaKnown RBP7.36□□□□□ -1.23
ATG17YLR423C XRS2P33301 854 aa7.36□□□□□ -1.23
ATG17YLR423C THI80P35202 319 aa7.36□□□□□ -1.23
ATG17YLR423C FMP52P40008 231 aa7.36□□□□□ -1.23
ATG17YLR423C VFA1P40080 203 aa7.36□□□□□ -1.23
ATG17YLR423C RAD26P40352 1085 aa7.36□□□□□ -1.23
ATG17YLR423C YDL183CP48569 320 aa7.36□□□□□ -1.23
ATG17YLR423C PHO23P50947 330 aa7.36□□□□□ -1.23
ATG17YLR423C ADY4Q05955 493 aa7.36□□□□□ -1.23
ATG17YLR423C TRM13Q12383 476 aa7.36□□□□□ -1.23
ATG17YLR423C GFA1P14742 717 aaKnown RBP7.35□□□□□ -1.23
ATG17YLR423C YCR015CP25616 317 aa7.35□□□□□ -1.23
ATG17YLR423C ELM1P32801 640 aa7.35□□□□□ -1.23
ATG17YLR423C HRB1P38922 454 aaKnown RBP RIP-Chip data7.35□□□□□ -1.23not detected
ATG17YLR423C ERP2P39704 215 aa7.35□□□□□ -1.23
ATG17YLR423C MPS3P47069 682 aa7.35□□□□□ -1.23
ATG17YLR423C BUL1P48524 976 aa7.35□□□□□ -1.23
ATG17YLR423C EIS1Q05050 843 aaKnown RBP7.35□□□□□ -1.23
ATG17YLR423C ALG7P07286 448 aa7.34□□□□□ -1.23
ATG17YLR423C ABF1P14164 731 aa7.34□□□□□ -1.23
ATG17YLR423C RER1P25560 188 aa7.34□□□□□ -1.23
ATG17YLR423C PHO11P35842 467 aa7.34□□□□□ -1.23
ATG17YLR423C SUL1P38359 859 aa7.34□□□□□ -1.23
ATG17YLR423C PHO12P38693 467 aa7.34□□□□□ -1.23
ATG17YLR423C NEW1Q08972 1196 aaKnown RBP7.34□□□□□ -1.23
ATG17YLR423C VPS33P20795 691 aa7.33□□□□□ -1.24
ATG17YLR423C RIT1P23796 513 aa7.33□□□□□ -1.24
ATG17YLR423C YCL049CP25577 312 aa7.33□□□□□ -1.24
ATG17YLR423C SLC1P33333 303 aa7.33□□□□□ -1.24
ATG17YLR423C YJL193WP39542 402 aa7.33□□□□□ -1.24
ATG17YLR423C KAP123P40069 1113 aaKnown RBP7.33□□□□□ -1.24
ATG17YLR423C CAB2P40506 365 aa7.33□□□□□ -1.24
ATG17YLR423C YAP1802P53309 568 aa7.33□□□□□ -1.24
ATG17YLR423C ARC35P53731 342 aaKnown RBP7.33□□□□□ -1.24
ATG17YLR423C VPS64Q03944 604 aa7.33□□□□□ -1.24
ATG17YLR423C ADE3P07245 946 aaKnown RBP7.32□□□□□ -1.24
ATG17YLR423C PFK2P16862 959 aaKnown RBP RIP-Chip data7.32□□□□□ -1.24not detected
ATG17YLR423C SWI4P25302 1093 aaKnown RBP7.32□□□□□ -1.24
ATG17YLR423C RPS7AP26786 190 aaKnown RBP7.32□□□□□ -1.24
ATG17YLR423C RAD16P31244 790 aa7.32□□□□□ -1.24
ATG17YLR423C RPT3P33298 428 aaKnown RBP7.32□□□□□ -1.24
ATG17YLR423C UME6P39001 836 aa7.32□□□□□ -1.24
ATG17YLR423C YGR054WP53235 642 aaKnown RBP7.32□□□□□ -1.24
ATG17YLR423C ENT2Q05785 613 aa7.32□□□□□ -1.24
ATG17YLR423C OPY2Q06810 360 aa7.32□□□□□ -1.24
ATG17YLR423C NCP1P16603 691 aaKnown RBP7.31□□□□□ -1.24
ATG17YLR423C CHS3P29465 1165 aa7.31□□□□□ -1.24
ATG17YLR423C MCM10P32354 571 aa7.31□□□□□ -1.24
ATG17YLR423C DHR2P36009 735 aaPredicted RBP7.31□□□□□ -1.24
ATG17YLR423C CTP1P38152 299 aa7.31□□□□□ -1.24
ATG17YLR423C STB5P38699 743 aa7.31□□□□□ -1.24
ATG17YLR423C SAP4P53036 818 aa7.31□□□□□ -1.24
ATG17YLR423C ATG21Q02887 496 aa7.31□□□□□ -1.24
ATG17YLR423C TRS31Q03337 283 aa7.31□□□□□ -1.24
ATG17YLR423C COG4Q06096 861 aa7.31□□□□□ -1.24
ATG17YLR423C NTO1Q12311 748 aa7.31□□□□□ -1.24
ATG17YLR423C SIR3P06701 978 aa7.3□□□□□ -1.24
ATG17YLR423C PPR1P07272 904 aaPredicted RBP7.3□□□□□ -1.24
ATG17YLR423C MTF2P10849 440 aa7.3□□□□□ -1.24
ATG17YLR423C FUB1P25659 250 aa7.3□□□□□ -1.24
ATG17YLR423C CTS1P29029 562 aa7.3□□□□□ -1.24
ATG17YLR423C DSS4P32601 143 aa7.3□□□□□ -1.24
ATG17YLR423C RRN3P36070 627 aa7.3□□□□□ -1.24
ATG17YLR423C KHA1P40309 873 aa7.3□□□□□ -1.24
ATG17YLR423C LRO1P40345 661 aa7.3□□□□□ -1.24
ATG17YLR423C POL31P46957 487 aa7.3□□□□□ -1.24
ATG17YLR423C TEL2P53038 688 aa7.3□□□□□ -1.24
ATG17YLR423C YDL086WQ07505 273 aa7.3□□□□□ -1.24
ATG17YLR423C YLR040CQ07988 224 aa7.3□□□□□ -1.24
ATG17YLR423C USV1Q12132 391 aa7.3□□□□□ -1.24
ATG17YLR423C UBC1P21734 215 aaKnown RBP7.29□□□□□ -1.24
ATG17YLR423C RPN12P32496 274 aa7.29□□□□□ -1.24
ATG17YLR423C YBR138CP38277 524 aa7.29□□□□□ -1.24
ATG17YLR423C IDS2P46958 469 aa7.29□□□□□ -1.24
ATG17YLR423C FHN1P53279 174 aa7.29□□□□□ -1.24
ATG17YLR423C HOF1Q05080 669 aa7.29□□□□□ -1.24
ATG17YLR423C YSH1Q06224 779 aaPredicted RBP7.29□□□□□ -1.24
ATG17YLR423C URN1Q06525 465 aaKnown RBP7.29□□□□□ -1.24
ATG17YLR423C IZH3Q07959 543 aa7.29□□□□□ -1.24
ATG17YLR423C MLH3Q12083 715 aa7.29□□□□□ -1.24
ATG17YLR423C FRD1P32614 470 aaKnown RBP7.28□□□□□ -1.24
ATG17YLR423C DEF1P35732 738 aaKnown RBP7.28□□□□□ -1.24
ATG17YLR423C ELF1P36053 145 aa7.28□□□□□ -1.24
ATG17YLR423C NPR3P38742 1146 aa7.28□□□□□ -1.24
ATG17YLR423C MNT3P40549 630 aa7.28□□□□□ -1.24
ATG17YLR423C RIA1P53893 1110 aa7.28□□□□□ -1.24
ATG17YLR423C CSR1Q06705 408 aaKnown RBP7.28□□□□□ -1.24
ATG17YLR423C THR1P17423 357 aaKnown RBP7.27□□□□□ -1.25
ATG17YLR423C RPA135P22138 1203 aaKnown RBP7.27□□□□□ -1.25
ATG17YLR423C SWC3P31376 625 aa7.27□□□□□ -1.25
ATG17YLR423C MSS1P32559 526 aaPredicted RBP7.27□□□□□ -1.25
ATG17YLR423C ARR3Q06598 404 aa7.27□□□□□ -1.25
ATG17YLR423C LEU2P04173 364 aaPredicted RBP7.26□□□□□ -1.25
ATG17YLR423C BET2P20133 325 aa7.26□□□□□ -1.25
ATG17YLR423C ARP2P32381 391 aaKnown RBP7.26□□□□□ -1.25
Retrieved 100 of 5,963 RNA–protein pairs in 40 ms