RNA–Protein interactions for RNA: YIR006C

PAN1, Transcript of Part of actin cytoskeleton-regulatory complex Pan1p-Sla1p-End3p, yeastyeast

Gene PAN1, Length 4,443 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PAN1YIR006C REP1P03871 373 aa4.78□□□□□ -1.64
PAN1YIR006C RET1P22276 1149 aaKnown RBP4.78□□□□□ -1.64
PAN1YIR006C BUD31P25337 157 aaPredicted RBP4.78□□□□□ -1.64
PAN1YIR006C YKR075CP36155 307 aa4.78□□□□□ -1.64
PAN1YIR006C MMS4P38257 691 aa4.78□□□□□ -1.64
PAN1YIR006C SAW1P39735 261 aa4.78□□□□□ -1.64
PAN1YIR006C STL1P39932 569 aa4.78□□□□□ -1.64
PAN1YIR006C IAH1P41734 238 aa4.78□□□□□ -1.64
PAN1YIR006C SWP82P43554 623 aa4.78□□□□□ -1.64
PAN1YIR006C PFD1P46988 109 aa4.78□□□□□ -1.64
PAN1YIR006C YJL132WP47014 750 aa4.78□□□□□ -1.64
PAN1YIR006C CPR7P47103 393 aa4.78□□□□□ -1.64
PAN1YIR006C ESBP6P53918 673 aa4.78□□□□□ -1.64
PAN1YIR006C CSN9Q03981 162 aa4.78□□□□□ -1.64
PAN1YIR006C TMA64Q04600 565 aaKnown RBP4.78□□□□□ -1.64
PAN1YIR006C MSH5Q12175 901 aa4.78□□□□□ -1.64
PAN1YIR006C RPS9BP05755 195 aaKnown RBP4.78□□□□□ -1.64
PAN1YIR006C ILS1P09436 1072 aaKnown RBP4.78□□□□□ -1.64
PAN1YIR006C NSP1P14907 823 aaKnown RBP4.78□□□□□ -1.64
PAN1YIR006C RPC82P32349 654 aa4.78□□□□□ -1.64
PAN1YIR006C PHA2P32452 334 aa4.78□□□□□ -1.64
PAN1YIR006C TFB1P32776 642 aa4.78□□□□□ -1.64
PAN1YIR006C YHL050CP38721 697 aa4.78□□□□□ -1.64
PAN1YIR006C DYS1P38791 387 aa4.78□□□□□ -1.64
PAN1YIR006C GPD2P41911 440 aaKnown RBP4.78□□□□□ -1.64
PAN1YIR006C YGL176CP46945 554 aa4.78□□□□□ -1.64
PAN1YIR006C PEX12Q04370 399 aa4.78□□□□□ -1.64
PAN1YIR006C YCS4Q06156 1176 aa4.78□□□□□ -1.64
PAN1YIR006C YLR177WQ06251 628 aa4.78□□□□□ -1.64
PAN1YIR006C YDL073WQ07454 984 aa4.78□□□□□ -1.64
PAN1YIR006C CDC31P06704 161 aaKnown RBP4.78□□□□□ -1.64
PAN1YIR006C RSR1P13856 272 aa4.78□□□□□ -1.64
PAN1YIR006C YSC83P32792 385 aa4.78□□□□□ -1.64
PAN1YIR006C COT1P32798 439 aa4.78□□□□□ -1.64
PAN1YIR006C RPT5P33297 434 aaKnown RBP4.78□□□□□ -1.64
PAN1YIR006C YBL036CP38197 257 aa4.78□□□□□ -1.64
PAN1YIR006C REG2P38232 338 aa4.78□□□□□ -1.64
PAN1YIR006C GUA1P38625 525 aaKnown RBP4.78□□□□□ -1.64
PAN1YIR006C PAN5P38787 379 aa4.78□□□□□ -1.64
PAN1YIR006C MEF2P39677 819 aa4.78□□□□□ -1.64
PAN1YIR006C FIR1P40020 876 aa4.78□□□□□ -1.64
PAN1YIR006C SIP5P40210 489 aaKnown RBP4.78□□□□□ -1.64
PAN1YIR006C UTP18P40362 594 aaPredicted RBP4.78□□□□□ -1.64
PAN1YIR006C ARF3P40994 183 aaRIP-Chip data4.78□□□□□ -1.64not detected
PAN1YIR006C NOP19P53317 196 aaPredicted RBP4.78□□□□□ -1.64
PAN1YIR006C DPL1Q05567 589 aa4.78□□□□□ -1.64
PAN1YIR006C AIM39Q08223 395 aa4.78□□□□□ -1.64
PAN1YIR006C PGC1Q08959 321 aa4.78□□□□□ -1.64
PAN1YIR006C RAD18P10862 487 aa4.77□□□□□ -1.65
PAN1YIR006C ART10P18634 518 aaKnown RBP4.77□□□□□ -1.65
PAN1YIR006C RGR1P19263 1082 aa4.77□□□□□ -1.65
PAN1YIR006C HSP60P19882 572 aaKnown RBP4.77□□□□□ -1.65
PAN1YIR006C IRE1P32361 1115 aa4.77□□□□□ -1.65
PAN1YIR006C SPR1P32603 445 aa4.77□□□□□ -1.65
PAN1YIR006C ADD66P36040 267 aa4.77□□□□□ -1.65
PAN1YIR006C KTR4P38131 464 aa4.77□□□□□ -1.65
PAN1YIR006C QNS1P38795 714 aaKnown RBP4.77□□□□□ -1.65
PAN1YIR006C SEC31P38968 1273 aaKnown RBP4.77□□□□□ -1.65
PAN1YIR006C SHC1P39000 512 aa4.77□□□□□ -1.65
PAN1YIR006C AVT1P47082 602 aa4.77□□□□□ -1.65
PAN1YIR006C USE1P53146 245 aa4.77□□□□□ -1.65
PAN1YIR006C YMR187CQ03236 431 aa4.77□□□□□ -1.65
PAN1YIR006C PLP1Q04004 230 aa4.77□□□□□ -1.65
PAN1YIR006C GAD1Q04792 585 aa4.77□□□□□ -1.65
PAN1YIR006C ARP7Q12406 477 aa4.77□□□□□ -1.65
PAN1YIR006C TRP2P00899 507 aaKnown RBP4.77□□□□□ -1.65
PAN1YIR006C RRT12P25381 491 aa4.77□□□□□ -1.65
PAN1YIR006C PUP3P25451 205 aaKnown RBP4.77□□□□□ -1.65
PAN1YIR006C HRR25P29295 494 aaKnown RBP4.77□□□□□ -1.65
PAN1YIR006C TDP1P38319 544 aa4.77□□□□□ -1.65
PAN1YIR006C YEL025CP39991 1188 aa4.77□□□□□ -1.65
PAN1YIR006C RGI2P40188 164 aa4.77□□□□□ -1.65
PAN1YIR006C MKT1P40850 830 aaKnown RBP4.77□□□□□ -1.65
PAN1YIR006C NUP84P52891 726 aa4.77□□□□□ -1.65
PAN1YIR006C ASI3P53983 676 aa4.77□□□□□ -1.65
PAN1YIR006C ORC3P54790 616 aa4.77□□□□□ -1.65
PAN1YIR006C YMR074CQ04773 145 aa4.77□□□□□ -1.65
PAN1YIR006C SGT2Q12118 346 aaKnown RBP4.77□□□□□ -1.65
PAN1YIR006C ATG34Q12292 412 aa4.77□□□□□ -1.65
PAN1YIR006C CDC34P14682 295 aa4.77□□□□□ -1.65
PAN1YIR006C APE1P14904 514 aa4.77□□□□□ -1.65
PAN1YIR006C RER1P25560 188 aa4.77□□□□□ -1.65
PAN1YIR006C SPB1P25582 841 aaPredicted RBP4.77□□□□□ -1.65
PAN1YIR006C RAD54P32863 898 aa4.77□□□□□ -1.65
PAN1YIR006C SRB2P34162 210 aa4.77□□□□□ -1.65
PAN1YIR006C PXL1P36166 706 aa4.77□□□□□ -1.65
PAN1YIR006C END3P39013 349 aa4.77□□□□□ -1.65
PAN1YIR006C NPP2P39997 493 aa4.77□□□□□ -1.65
PAN1YIR006C FIS1P40515 155 aa4.77□□□□□ -1.65
PAN1YIR006C VMA13P41807 478 aaKnown RBP4.77□□□□□ -1.65
PAN1YIR006C ELP2P42935 788 aa4.77□□□□□ -1.65
PAN1YIR006C GRX3Q03835 250 aa4.77□□□□□ -1.65
PAN1YIR006C GMC2Q06201 188 aa4.77□□□□□ -1.65
PAN1YIR006C YET3Q07451 203 aa4.77□□□□□ -1.65
PAN1YIR006C ESC8Q08119 714 aa4.77□□□□□ -1.65
PAN1YIR006C GPN2Q08726 347 aaPredicted RBP4.77□□□□□ -1.65
PAN1YIR006C VPS5Q92331 675 aa4.77□□□□□ -1.65
PAN1YIR006C RGS2Q99188 309 aa4.77□□□□□ -1.65
PAN1YIR006C FBA1P14540 359 aaKnown RBP4.77□□□□□ -1.65
PAN1YIR006C DBP3P20447 523 aaKnown RBP4.77□□□□□ -1.65
Retrieved 100 of 5,963 RNA–protein pairs in 10.6 ms