RNA–Protein interactions for RNA: ENST00000641711.1

PHGDH-224, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 712 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-224ENST00000641711 ZNF526Q8TF50 670 aaPredicted RBP12.27□□□□□ -0.45
PHGDH-224ENST00000641711 KCNB2Q92953 911 aa12.27□□□□□ -0.45
PHGDH-224ENST00000641711 TEKT1Q969V4 418 aa12.27□□□□□ -0.45
PHGDH-224ENST00000641711 ZBED3Q96IU2 234 aaPredicted RBP12.27□□□□□ -0.45
PHGDH-224ENST00000641711 HAUS7Q99871 368 aa12.27□□□□□ -0.45
PHGDH-224ENST00000641711 DIAPH3Q9NSV4 1193 aa12.27□□□□□ -0.45
PHGDH-224ENST00000641711 PGAP2Q9UHJ9 254 aa12.27□□□□□ -0.45
PHGDH-224ENST00000641711 PALD1Q9ULE6 856 aa12.27□□□□□ -0.45
PHGDH-224ENST00000641711 TTF2Q9UNY4 1162 aaKnown RBP12.27□□□□□ -0.45
PHGDH-224ENST00000641711 RFX7Q2KHR2 1363 aa12.27□□□□□ -0.45
PHGDH-224ENST00000641711 TRPM7Q96QT4 1865 aa12.26□□□□□ -0.45
PHGDH-224ENST00000641711 DDX11L8A8MPP1 907 aa12.26□□□□□ -0.45
PHGDH-224ENST00000641711 LDHCP07864 332 aa12.26□□□□□ -0.45
PHGDH-224ENST00000641711 PRDX5P30044 214 aa12.26□□□□□ -0.45
PHGDH-224ENST00000641711 FSTL1Q12841 308 aa12.26□□□□□ -0.45
PHGDH-224ENST00000641711 SCARF1Q14162 830 aa12.26□□□□□ -0.45
PHGDH-224ENST00000641711 KIAA1211Q6ZU35 1233 aa12.26□□□□□ -0.45
PHGDH-224ENST00000641711 FAM163AQ96GL9 167 aaPredicted RBP12.26□□□□□ -0.45
PHGDH-224ENST00000641711 ZDHHC15Q96MV8 337 aa12.26□□□□□ -0.45
PHGDH-224ENST00000641711 POLR2AP24928 1970 aaKnown RBP12.26□□□□□ -0.45
PHGDH-224ENST00000641711 GAKO14976 1311 aa12.26□□□□□ -0.45
PHGDH-224ENST00000641711 SPDYE2BA6NHP3 402 aa12.25□□□□□ -0.45
PHGDH-224ENST00000641711 MYO1BO43795 1136 aa12.25□□□□□ -0.45
PHGDH-224ENST00000641711 SPDYE6P0CI01 402 aa12.25□□□□□ -0.45
PHGDH-224ENST00000641711 PTMSP20962 102 aa12.25□□□□□ -0.45
PHGDH-224ENST00000641711 ZAP70P43403 619 aa12.25□□□□□ -0.45
PHGDH-224ENST00000641711 NEK4P51957 841 aa12.25□□□□□ -0.45
PHGDH-224ENST00000641711 NUCB2P80303 420 aa12.25□□□□□ -0.45
PHGDH-224ENST00000641711 MAP3K12Q12852 859 aa12.25□□□□□ -0.45
PHGDH-224ENST00000641711 CUL4AQ13619 759 aa12.25□□□□□ -0.45
PHGDH-224ENST00000641711 DLGAP5Q15398 846 aa12.25□□□□□ -0.45
PHGDH-224ENST00000641711 LRRFIP1Q32MZ4 808 aaKnown RBP12.25□□□□□ -0.45
PHGDH-224ENST00000641711 DZIP1Q86YF9 867 aaKnown RBP12.25□□□□□ -0.45
PHGDH-224ENST00000641711 SMC1BQ8NDV3 1235 aa12.25□□□□□ -0.45
PHGDH-224ENST00000641711 TRPM4Q8TD43 1214 aa12.25□□□□□ -0.45
PHGDH-224ENST00000641711 TNPO1Q92973 898 aaKnown RBP12.25□□□□□ -0.45
PHGDH-224ENST00000641711 GBP4Q96PP9 640 aa12.25□□□□□ -0.45
PHGDH-224ENST00000641711 MXD3Q9BW11 206 aa12.25□□□□□ -0.45
PHGDH-224ENST00000641711 ABCF2Q9UG63 623 aa12.25□□□□□ -0.45
PHGDH-224ENST00000641711 JAG2Q9Y219 1238 aa12.25□□□□□ -0.45
PHGDH-224ENST00000641711 WNT10BO00744 389 aa12.24□□□□□ -0.45
PHGDH-224ENST00000641711 CYP2E1P05181 493 aaPredicted RBP12.24□□□□□ -0.45
PHGDH-224ENST00000641711 CRKP46108 304 aa12.24□□□□□ -0.45
PHGDH-224ENST00000641711 TNFAIP1Q13829 316 aa12.24□□□□□ -0.45
PHGDH-224ENST00000641711 CFAP100Q494V2 611 aa12.24□□□□□ -0.45
PHGDH-224ENST00000641711 TBC1D10BQ4KMP7 808 aaPredicted RBP12.24□□□□□ -0.45
PHGDH-224ENST00000641711 FKBP1CQ5VVH2 108 aa12.24□□□□□ -0.45
PHGDH-224ENST00000641711 FOCADQ5VW36 1801 aa12.24□□□□□ -0.45
PHGDH-224ENST00000641711 CHADLQ6NUI6 762 aa12.24□□□□□ -0.45
PHGDH-224ENST00000641711 CWC27Q6UX04 472 aaKnown RBP12.24□□□□□ -0.45
PHGDH-224ENST00000641711 PI16Q6UXB8 463 aa12.24□□□□□ -0.45
PHGDH-224ENST00000641711 APOBEC3FQ8IUX4 373 aaKnown RBP12.24□□□□□ -0.45
PHGDH-224ENST00000641711 INTS4Q96HW7 963 aaKnown RBP12.24□□□□□ -0.45
PHGDH-224ENST00000641711 PAG1Q9NWQ8 432 aa12.24□□□□□ -0.45
PHGDH-224ENST00000641711 LRP2BPQ9P2M1 347 aa12.24□□□□□ -0.45
PHGDH-224ENST00000641711 RPAP1Q9BWH6 1393 aaPredicted RBP12.23□□□□□ -0.45
PHGDH-224ENST00000641711 MROH7-TTC4A0A0A0MT08 1334 aa12.23□□□□□ -0.45
PHGDH-224ENST00000641711 PLCG2P16885 1265 aa12.23□□□□□ -0.45
PHGDH-224ENST00000641711 EAPPQ56P03 285 aaPredicted RBP12.23□□□□□ -0.45
PHGDH-224ENST00000641711 ZSCAN25Q6NSZ9 544 aa12.23□□□□□ -0.45
PHGDH-224ENST00000641711 SAMD7Q7Z3H4 446 aa12.23□□□□□ -0.45
PHGDH-224ENST00000641711 NSUN4Q96CB9 384 aaKnown RBP12.23□□□□□ -0.45
PHGDH-224ENST00000641711 TMX3Q96JJ7 454 aa12.23□□□□□ -0.45
PHGDH-224ENST00000641711 TM6SF1Q9BZW5 370 aa12.23□□□□□ -0.45
PHGDH-224ENST00000641711 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.23□□□□□ -0.451e-14■□□□□ 11
PHGDH-224ENST00000641711 BOLA2Q9H3K6 86 aa12.23□□□□□ -0.45
PHGDH-224ENST00000641711 RAI14Q9P0K7 980 aa12.23□□□□□ -0.45
PHGDH-224ENST00000641711 PPP2R3BQ9Y5P8 575 aa12.23□□□□□ -0.45
PHGDH-224ENST00000641711 SNX14Q9Y5W7 946 aa12.23□□□□□ -0.45
PHGDH-224ENST00000641711 SHTN1A0MZ66 631 aa12.22□□□□□ -0.45
PHGDH-224ENST00000641711 F8W031 263 aaPredicted RBP12.22□□□□□ -0.45
PHGDH-224ENST00000641711 ZFYP08048 801 aaPredicted RBP12.22□□□□□ -0.45
PHGDH-224ENST00000641711 HIRAP54198 1017 aaPredicted RBP12.22□□□□□ -0.45
PHGDH-224ENST00000641711 MECOMQ03112 1051 aa12.22□□□□□ -0.45
PHGDH-224ENST00000641711 SPDYE2Q495Y8 402 aa12.22□□□□□ -0.45
PHGDH-224ENST00000641711 NAA16Q6N069 864 aaPredicted RBP12.22□□□□□ -0.45
PHGDH-224ENST00000641711 KBTBD3Q8NAB2 608 aa12.22□□□□□ -0.45
PHGDH-224ENST00000641711 DCPSQ96C86 337 aaKnown RBP12.22□□□□□ -0.45
PHGDH-224ENST00000641711 DNAJC2Q99543 621 aaKnown RBP12.22□□□□□ -0.45
PHGDH-224ENST00000641711 GGA3Q9NZ52 723 aa12.22□□□□□ -0.45
PHGDH-224ENST00000641711 TMOD2Q9NZR1 351 aa12.22□□□□□ -0.45
PHGDH-224ENST00000641711 DAGLAQ9Y4D2 1042 aa12.22□□□□□ -0.45
PHGDH-224ENST00000641711 CDK5RAP2Q96SN8 1893 aa12.22□□□□□ -0.45
PHGDH-224ENST00000641711 COL2A1P02458 1487 aaPredicted RBP12.21□□□□□ -0.45
PHGDH-224ENST00000641711 CCDC171Q6TFL3 1326 aa12.21□□□□□ -0.45
PHGDH-224ENST00000641711 GPR75-ASB3A0A0A6YYF3 556 aa12.21□□□□□ -0.45
PHGDH-224ENST00000641711 GOLIM4O00461 696 aa12.21□□□□□ -0.45
PHGDH-224ENST00000641711 IDH1O75874 414 aaKnown RBP12.21□□□□□ -0.45
PHGDH-224ENST00000641711 RBM5P52756 815 aaKnown RBP eCLIP12.21□□□□□ -0.45
PHGDH-224ENST00000641711 NMIQ13287 307 aaPredicted RBP12.21□□□□□ -0.45
PHGDH-224ENST00000641711 NECTIN1Q15223 517 aa12.21□□□□□ -0.45
PHGDH-224ENST00000641711 GRIK5Q16478 980 aa12.21□□□□□ -0.45
PHGDH-224ENST00000641711 CDC37L1Q7L3B6 337 aa12.21□□□□□ -0.45
PHGDH-224ENST00000641711 MAP4K1Q92918 833 aa12.21□□□□□ -0.45
PHGDH-224ENST00000641711 TTC14Q96N46 770 aa12.21□□□□□ -0.45
PHGDH-224ENST00000641711 NOL10Q9BSC4 688 aaKnown RBP12.21□□□□□ -0.45
PHGDH-224ENST00000641711 FSD1Q9BTV5 496 aa12.21□□□□□ -0.45
PHGDH-224ENST00000641711 PIH1D3Q9NQM4 214 aaKnown RBP12.21□□□□□ -0.45
PHGDH-224ENST00000641711 FOXD4L1Q9NU39 408 aa12.21□□□□□ -0.45
PHGDH-224ENST00000641711 BAG3O95817 575 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms