RNA–Protein interactions for RNA: ENST00000641471.1

PPT1-215, Transcript of palmitoyl-protein thioesterase 1, human

BASIC

Gene PPT1, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPT1-215	ENST00000641471	SDF4	Q9BRK5	362 aa		18.4	■□□□□ 0.54
PPT1-215	ENST00000641471	SNAP23	O00161	211 aa		18.4	■□□□□ 0.54
PPT1-215	ENST00000641471	RASGRF1	Q13972	1273 aa		18.4	■□□□□ 0.54
PPT1-215	ENST00000641471	ALX1	Q15699	326 aa		18.4	■□□□□ 0.54
PPT1-215	ENST00000641471	SYNE3	Q6ZMZ3	975 aa		18.4	■□□□□ 0.54
PPT1-215	ENST00000641471	ZNF710	Q8N1W2	664 aa		18.4	■□□□□ 0.54
PPT1-215	ENST00000641471	SPATA5	Q8NB90	893 aa		18.4	■□□□□ 0.54
PPT1-215	ENST00000641471	IGDCC4	Q8TDY8	1250 aa		18.4	■□□□□ 0.54
PPT1-215	ENST00000641471	FBXW7	Q969H0	707 aa		18.4	■□□□□ 0.54
PPT1-215	ENST00000641471	ALG1	Q9BT22	464 aa		18.4	■□□□□ 0.54
PPT1-215	ENST00000641471	INCENP	Q9NQS7	918 aa		18.4	■□□□□ 0.54
PPT1-215	ENST00000641471	COL4A1	P02462	1669 aa		18.39	■□□□□ 0.53
PPT1-215	ENST00000641471	ROBO1	Q9Y6N7	1651 aa		18.39	■□□□□ 0.53
PPT1-215	ENST00000641471	EXOC5	O00471	708 aa		18.39	■□□□□ 0.53
PPT1-215	ENST00000641471	SUSD4	Q5VX71	490 aa		18.39	■□□□□ 0.53
PPT1-215	ENST00000641471	MICU3	Q86XE3	530 aa		18.39	■□□□□ 0.53
PPT1-215	ENST00000641471	TMEM87B	Q96K49	555 aa		18.39	■□□□□ 0.53
PPT1-215	ENST00000641471	LY9	Q9HBG7	655 aa		18.39	■□□□□ 0.53
PPT1-215	ENST00000641471	KIAA1468	Q9P260	1216 aa		18.39	■□□□□ 0.53
PPT1-215	ENST00000641471	TACC3	Q9Y6A5	838 aa		18.39	■□□□□ 0.53
PPT1-215	ENST00000641471	CIC	Q96RK0	1608 aa	Predicted RBP	18.39	■□□□□ 0.53
PPT1-215	ENST00000641471	RIOK3	O14730	519 aa	Known RBP	18.39	■□□□□ 0.53
PPT1-215	ENST00000641471	SLC5A1	P13866	664 aa		18.39	■□□□□ 0.53
PPT1-215	ENST00000641471	EIF5	P55010	431 aa	Known RBP	18.39	■□□□□ 0.53
PPT1-215	ENST00000641471	PHKB	Q93100	1093 aa		18.39	■□□□□ 0.53
PPT1-215	ENST00000641471	NRAP	Q86VF7	1730 aa		18.38	■□□□□ 0.53
PPT1-215	ENST00000641471	MBD4	O95243	580 aa		18.38	■□□□□ 0.53
PPT1-215	ENST00000641471	ARID5B	Q14865	1188 aa		18.38	■□□□□ 0.53
PPT1-215	ENST00000641471	NTRK3	Q16288	839 aa		18.38	■□□□□ 0.53
PPT1-215	ENST00000641471	DPCR1	Q3MIW9	517 aa		18.38	■□□□□ 0.53
PPT1-215	ENST00000641471	KRT40	Q6A162	431 aa		18.38	■□□□□ 0.53
PPT1-215	ENST00000641471	MTERF4	Q7Z6M4	381 aa	Known RBP	18.38	■□□□□ 0.53
PPT1-215	ENST00000641471	VPS37D	Q86XT2	251 aa		18.38	■□□□□ 0.53
PPT1-215	ENST00000641471	MAGEB6	Q8N7X4	407 aa		18.38	■□□□□ 0.53
PPT1-215	ENST00000641471	AK7	Q96M32	723 aa		18.38	■□□□□ 0.53
PPT1-215	ENST00000641471	FAM177B	A6PVY3	158 aa		18.38	■□□□□ 0.53
PPT1-215	ENST00000641471	RANBP6	O60518	1105 aa	Known RBP	18.38	■□□□□ 0.53
PPT1-215	ENST00000641471	WDHD1	O75717	1129 aa	Predicted RBP	18.38	■□□□□ 0.53
PPT1-215	ENST00000641471	CDKL5	O76039	1030 aa		18.38	■□□□□ 0.53
PPT1-215	ENST00000641471	PFKFB1	P16118	471 aa		18.38	■□□□□ 0.53
PPT1-215	ENST00000641471	GLIPR1L2	Q4G1C9	344 aa		18.38	■□□□□ 0.53
PPT1-215	ENST00000641471	SGMS1	Q86VZ5	419 aa		18.38	■□□□□ 0.53
PPT1-215	ENST00000641471	IFNL3	Q8IZI9	196 aa		18.38	■□□□□ 0.53
PPT1-215	ENST00000641471	SEC31B	Q9NQW1	1179 aa		18.38	■□□□□ 0.53
PPT1-215	ENST00000641471	FAM217B	Q9NTX9	383 aa	Predicted RBP	18.38	■□□□□ 0.53
PPT1-215	ENST00000641471	TAF1	P21675	1872 aa		18.37	■□□□□ 0.53
PPT1-215	ENST00000641471	ZBTB43	O43298	467 aa		18.37	■□□□□ 0.53
PPT1-215	ENST00000641471	ZNF202	O95125	648 aa		18.37	■□□□□ 0.53
PPT1-215	ENST00000641471	CTDSPL2	Q05D32	466 aa		18.37	■□□□□ 0.53
PPT1-215	ENST00000641471	CHAF1A	Q13111	956 aa	Predicted RBP	18.37	■□□□□ 0.53
PPT1-215	ENST00000641471	SLC39A14	Q15043	492 aa		18.37	■□□□□ 0.53
PPT1-215	ENST00000641471	LRRC8A	Q8IWT6	810 aa		18.37	■□□□□ 0.53
PPT1-215	ENST00000641471	MYL10	Q9BUA6	226 aa		18.37	■□□□□ 0.53
PPT1-215	ENST00000641471	NAT10	Q9H0A0	1025 aa	Known RBP	18.37	■□□□□ 0.53
PPT1-215	ENST00000641471	PATL2	C9JE40	543 aa	Known RBP	18.37	■□□□□ 0.53
PPT1-215	ENST00000641471	CMA1	P23946	247 aa		18.37	■□□□□ 0.53
PPT1-215	ENST00000641471	INTS5	Q6P9B9	1019 aa	Known RBP	18.37	■□□□□ 0.53
PPT1-215	ENST00000641471	C16orf45	Q96MC5	204 aa	Predicted RBP	18.37	■□□□□ 0.53
PPT1-215	ENST00000641471	ARMT1	Q9H993	441 aa		18.37	■□□□□ 0.53
PPT1-215	ENST00000641471	GOLGA8A	A7E2F4	631 aa		18.36	■□□□□ 0.53
PPT1-215	ENST00000641471	MARCKS	P29966	332 aa	Predicted RBP	18.36	■□□□□ 0.53
PPT1-215	ENST00000641471	TMEM67	Q5HYA8	995 aa		18.36	■□□□□ 0.53
PPT1-215	ENST00000641471	BPIFA3	Q9BQP9	254 aa		18.36	■□□□□ 0.53
PPT1-215	ENST00000641471	NAPB	Q9H115	298 aa		18.36	■□□□□ 0.53
PPT1-215	ENST00000641471	MYH2	Q9UKX2	1941 aa		18.36	■□□□□ 0.53
PPT1-215	ENST00000641471	MAP3K12	Q12852	859 aa		18.35	■□□□□ 0.53
PPT1-215	ENST00000641471	PTPA	Q15257	358 aa		18.35	■□□□□ 0.53
PPT1-215	ENST00000641471	BCL2L12	Q9HB09	334 aa		18.35	■□□□□ 0.53
PPT1-215	ENST00000641471	UBE2Q2L	H0YL09	131 aa		18.35	■□□□□ 0.53
PPT1-215	ENST00000641471	SLC3A2	P08195	630 aa	Known RBP	18.35	■□□□□ 0.53
PPT1-215	ENST00000641471	CPLX2	Q6PUV4	134 aa	Known RBP	18.35	■□□□□ 0.53
PPT1-215	ENST00000641471	NFXL1	Q6ZNB6	911 aa		18.35	■□□□□ 0.53
PPT1-215	ENST00000641471	BCL9L	Q86UU0	1499 aa		18.35	■□□□□ 0.53
PPT1-215	ENST00000641471	BAZ2A	Q9UIF9	1905 aa	Known RBP	18.35	■□□□□ 0.53
PPT1-215	ENST00000641471	GSG1L2	A8MUP6	293 aa		18.34	■□□□□ 0.53
PPT1-215	ENST00000641471	COL5A3	P25940	1745 aa	Predicted RBP	18.34	■□□□□ 0.53
PPT1-215	ENST00000641471	LIFR	P42702	1097 aa		18.34	■□□□□ 0.53
PPT1-215	ENST00000641471	NID2	Q14112	1375 aa		18.34	■□□□□ 0.53
PPT1-215	ENST00000641471	MPHOSPH8	Q99549	860 aa		18.34	■□□□□ 0.53
PPT1-215	ENST00000641471	CCDC87	Q9NVE4	849 aa		18.34	■□□□□ 0.53
PPT1-215	ENST00000641471	ZSWIM5	Q9P217	1185 aa		18.34	■□□□□ 0.53
PPT1-215	ENST00000641471	AHDC1	Q5TGY3	1603 aa	Predicted RBP	18.34	■□□□□ 0.53
PPT1-215	ENST00000641471	STK36	Q9NRP7	1315 aa		18.34	■□□□□ 0.53
PPT1-215	ENST00000641471	PRKAB2	O43741	272 aa		18.34	■□□□□ 0.53
PPT1-215	ENST00000641471	IARS	P41252	1262 aa	Known RBP	18.34	■□□□□ 0.53
PPT1-215	ENST00000641471	NLRP12	P59046	1061 aa		18.34	■□□□□ 0.53
PPT1-215	ENST00000641471	RBM6	P78332	1123 aa	Known RBP	18.34	■□□□□ 0.53
PPT1-215	ENST00000641471	NBPF11	Q86T75	865 aa		18.34	■□□□□ 0.53
PPT1-215	ENST00000641471	LCORL	Q8N3X6	602 aa		18.34	■□□□□ 0.53
PPT1-215	ENST00000641471	MAP3K14	Q99558	947 aa		18.34	■□□□□ 0.53
PPT1-215	ENST00000641471	UTP14A	Q9BVJ6	771 aa	Known RBP	18.34	■□□□□ 0.53
PPT1-215	ENST00000641471	TAOK2	Q9UL54	1235 aa		18.34	■□□□□ 0.53
PPT1-215	ENST00000641471	BIN1	O00499	593 aa		18.33	■□□□□ 0.53
PPT1-215	ENST00000641471	NEMF	O60524	1076 aa		18.33	■□□□□ 0.53
PPT1-215	ENST00000641471	CAMTA2	O94983	1202 aa		18.33	■□□□□ 0.53
PPT1-215	ENST00000641471	CRKL	P46109	303 aa	Known RBP	18.33	■□□□□ 0.53
PPT1-215	ENST00000641471	CCZ1B	P86790	482 aa		18.33	■□□□□ 0.53
PPT1-215	ENST00000641471	CCZ1	P86791	482 aa	Predicted RBP	18.33	■□□□□ 0.53
PPT1-215	ENST00000641471	HPSE	Q9Y251	543 aa		18.33	■□□□□ 0.53
PPT1-215	ENST00000641471	CCDC69	A6NI79	296 aa		18.33	■□□□□ 0.52

Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms