RNA–Protein interactions for RNA: ENST00000641247.1

PHGDH-212, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-212ENST00000641247 FLT3LGP49771 235 aa12.4□□□□□ -0.42
PHGDH-212ENST00000641247 GNAI1P63096 354 aa12.4□□□□□ -0.42
PHGDH-212ENST00000641247 LRIT3Q3SXY7 679 aa12.4□□□□□ -0.42
PHGDH-212ENST00000641247 APOBEC3HQ6NTF7 200 aaKnown RBP12.4□□□□□ -0.42
PHGDH-212ENST00000641247 SLAIN1Q8ND83 568 aa12.4□□□□□ -0.42
PHGDH-212ENST00000641247 PAK6Q9NQU5 681 aaPredicted RBP12.4□□□□□ -0.42
PHGDH-212ENST00000641247 IQSEC3Q9UPP2 1182 aaPredicted RBP12.4□□□□□ -0.42
PHGDH-212ENST00000641247 KCNH4Q9UQ05 1017 aa12.4□□□□□ -0.42
PHGDH-212ENST00000641247 ECM29Q5VYK3 1845 aa12.39□□□□□ -0.43
PHGDH-212ENST00000641247 HIBADHP31937 336 aaKnown RBP12.39□□□□□ -0.43
PHGDH-212ENST00000641247 IFIT5Q13325 482 aaKnown RBP12.39□□□□□ -0.43
PHGDH-212ENST00000641247 RALBP1Q15311 655 aa12.39□□□□□ -0.43
PHGDH-212ENST00000641247 MIER1Q8N108 512 aa12.39□□□□□ -0.43
PHGDH-212ENST00000641247 PUS3Q9BZE2 481 aaKnown RBP12.39□□□□□ -0.43
PHGDH-212ENST00000641247 SLC4A2P04920 1241 aa12.38□□□□□ -0.43
PHGDH-212ENST00000641247 FCGRTP55899 365 aa12.38□□□□□ -0.43
PHGDH-212ENST00000641247 LMBR1LQ6UX01 489 aa12.38□□□□□ -0.43
PHGDH-212ENST00000641247 LDHAL6AQ6ZMR3 332 aa12.38□□□□□ -0.43
PHGDH-212ENST00000641247 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.38□□□□□ -0.43
PHGDH-212ENST00000641247 C7orf61Q8IZ16 206 aa12.38□□□□□ -0.43
PHGDH-212ENST00000641247 TSR2Q969E8 191 aaKnown RBP12.38□□□□□ -0.43
PHGDH-212ENST00000641247 ZNF112Q9UJU3 913 aa12.38□□□□□ -0.43
PHGDH-212ENST00000641247 CHMP3Q9Y3E7 222 aa12.38□□□□□ -0.43
PHGDH-212ENST00000641247 SLURP2P0DP57 97 aa12.37□□□□□ -0.43
PHGDH-212ENST00000641247 MAGEA10P43363 369 aaPredicted RBP12.37□□□□□ -0.43
PHGDH-212ENST00000641247 FAM83AQ86UY5 434 aa12.37□□□□□ -0.43
PHGDH-212ENST00000641247 GUCD1Q96NT3 240 aa12.37□□□□□ -0.43
PHGDH-212ENST00000641247 TRIM32Q13049 653 aa12.36□□□□□ -0.43
PHGDH-212ENST00000641247 CHAF1AQ13111 956 aaPredicted RBP12.36□□□□□ -0.43
PHGDH-212ENST00000641247 FBXO33Q7Z6M2 555 aa12.36□□□□□ -0.43
PHGDH-212ENST00000641247 TDHQ8IZJ6 230 aa12.36□□□□□ -0.43
PHGDH-212ENST00000641247 LINS1Q8NG48 757 aa12.36□□□□□ -0.43
PHGDH-212ENST00000641247 PXYLP1Q8TE99 480 aa12.36□□□□□ -0.43
PHGDH-212ENST00000641247 DNAAF4Q8WXU2 420 aa12.36□□□□□ -0.43
PHGDH-212ENST00000641247 ZDHHC15Q96MV8 337 aa12.36□□□□□ -0.43
PHGDH-212ENST00000641247 ZNF341Q9BYN7 854 aa12.36□□□□□ -0.43
PHGDH-212ENST00000641247 CNNM1Q9NRU3 951 aa12.36□□□□□ -0.43
PHGDH-212ENST00000641247 HDLBPQ00341 1268 aaKnown RBP12.35□□□□□ -0.43
PHGDH-212ENST00000641247 FLIIQ13045 1269 aa12.35□□□□□ -0.43
PHGDH-212ENST00000641247 IRF5Q13568 498 aa12.35□□□□□ -0.43
PHGDH-212ENST00000641247 UBE4AQ14139 1066 aa12.35□□□□□ -0.43
PHGDH-212ENST00000641247 WDR43Q15061 677 aaKnown RBP eCLIP12.35□□□□□ -0.43
PHGDH-212ENST00000641247 NECAB2Q7Z6G3 386 aa12.35□□□□□ -0.43
PHGDH-212ENST00000641247 ZFPM1Q8IX07 1006 aa12.35□□□□□ -0.43
PHGDH-212ENST00000641247 ARAP2Q8WZ64 1704 aa12.34□□□□□ -0.43
PHGDH-212ENST00000641247 F6X3S4 739 aa12.34□□□□□ -0.43
PHGDH-212ENST00000641247 POTEB2H3BUK9 544 aa12.34□□□□□ -0.43
PHGDH-212ENST00000641247 ANP32CO43423 234 aa12.34□□□□□ -0.43
PHGDH-212ENST00000641247 TCP10Q12799 353 aa12.34□□□□□ -0.43
PHGDH-212ENST00000641247 NFIAQ12857 509 aa12.34□□□□□ -0.43
PHGDH-212ENST00000641247 TEKT1Q969V4 418 aa12.34□□□□□ -0.43
PHGDH-212ENST00000641247 PARK7Q99497 189 aaKnown RBP12.34□□□□□ -0.43
PHGDH-212ENST00000641247 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.34□□□□□ -0.43
PHGDH-212ENST00000641247 MYH16Q9H6N6 1097 aa12.34□□□□□ -0.43
PHGDH-212ENST00000641247 MYH3P11055 1940 aa12.34□□□□□ -0.43
PHGDH-212ENST00000641247 MYBBP1AQ9BQG0 1328 aaKnown RBP12.34□□□□□ -0.43
PHGDH-212ENST00000641247 CXCL11O14625 94 aa12.33□□□□□ -0.44
PHGDH-212ENST00000641247 TWISTNBQ3B726 338 aaPredicted RBP12.33□□□□□ -0.44
PHGDH-212ENST00000641247 NOL9Q5SY16 702 aaKnown RBP12.33□□□□□ -0.44
PHGDH-212ENST00000641247 BEND3Q5T5X7 828 aa12.33□□□□□ -0.44
PHGDH-212ENST00000641247 FKBP1CQ5VVH2 108 aa12.33□□□□□ -0.44
PHGDH-212ENST00000641247 DCAF15Q66K64 600 aa12.33□□□□□ -0.44
PHGDH-212ENST00000641247 FAM161BQ96MY7 647 aa12.33□□□□□ -0.44
PHGDH-212ENST00000641247 MRIQ9BWK5 157 aa12.33□□□□□ -0.44
PHGDH-212ENST00000641247 STK31Q9BXU1 1019 aa12.33□□□□□ -0.44
PHGDH-212ENST00000641247 TAOK2Q9UL54 1235 aa12.33□□□□□ -0.44
PHGDH-212ENST00000641247 UNC80Q8N2C7 3258 aa12.32□□□□□ -0.44
PHGDH-212ENST00000641247 PHF20L1A8MW92 1017 aa12.32□□□□□ -0.44
PHGDH-212ENST00000641247 TNPO2O14787 897 aaKnown RBP12.32□□□□□ -0.44
PHGDH-212ENST00000641247 FKBP5Q13451 457 aaPredicted RBP12.32□□□□□ -0.44
PHGDH-212ENST00000641247 CCDC57Q2TAC2 916 aa12.32□□□□□ -0.44
PHGDH-212ENST00000641247 FAM151AQ8WW52 585 aa12.32□□□□□ -0.44
PHGDH-212ENST00000641247 KAZALD1Q96I82 304 aa12.32□□□□□ -0.44
PHGDH-212ENST00000641247 UBE2OQ9C0C9 1292 aaKnown RBP12.32□□□□□ -0.44
PHGDH-212ENST00000641247 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.32□□□□□ -0.44
PHGDH-212ENST00000641247 FAM198AQ9UFP1 575 aa12.32□□□□□ -0.44
PHGDH-212ENST00000641247 ZHX2Q9Y6X8 837 aa12.32□□□□□ -0.44
PHGDH-212ENST00000641247 ALPK3Q96L96 1907 aa12.32□□□□□ -0.44
PHGDH-212ENST00000641247 A0A1B0GUL6 1792 aa12.32□□□□□ -0.44
PHGDH-212ENST00000641247 RPTORQ8N122 1335 aa12.32□□□□□ -0.44
PHGDH-212ENST00000641247 SPTBN5Q9NRC6 3674 aaKnown RBP12.31□□□□□ -0.44
PHGDH-212ENST00000641247 A0A0G2JLL6 359 aaPredicted RBP12.31□□□□□ -0.44
PHGDH-212ENST00000641247 LRRC24Q50LG9 513 aa12.31□□□□□ -0.44
PHGDH-212ENST00000641247 CDC42EP5Q6NZY7 148 aa12.31□□□□□ -0.44
PHGDH-212ENST00000641247 PRRT2Q7Z6L0 340 aaPredicted RBP12.31□□□□□ -0.44
PHGDH-212ENST00000641247 CCDC84Q86UT8 332 aaPredicted RBP12.31□□□□□ -0.44
PHGDH-212ENST00000641247 NBPF3Q9H094 633 aa12.31□□□□□ -0.44
PHGDH-212ENST00000641247 PRDM6Q9NQX0 595 aa12.31□□□□□ -0.44
PHGDH-212ENST00000641247 GJD2Q9UKL4 321 aa12.31□□□□□ -0.44
PHGDH-212ENST00000641247 AFG3L2Q9Y4W6 797 aa12.31□□□□□ -0.44
PHGDH-212ENST00000641247 PFASO15067 1338 aa12.31□□□□□ -0.44
PHGDH-212ENST00000641247 RPAP1Q9BWH6 1393 aaPredicted RBP12.3□□□□□ -0.44
PHGDH-212ENST00000641247 VCANP13611 3396 aa12.3□□□□□ -0.44
PHGDH-212ENST00000641247 CAPN2P17655 700 aa12.3□□□□□ -0.44
PHGDH-212ENST00000641247 MDM2Q00987 491 aaPredicted RBP12.3□□□□□ -0.44
PHGDH-212ENST00000641247 CALD1Q05682 793 aaKnown RBP12.3□□□□□ -0.44
PHGDH-212ENST00000641247 TAF7LQ5H9L4 462 aa12.3□□□□□ -0.44
PHGDH-212ENST00000641247 HHIPL2Q6UWX4 724 aa12.3□□□□□ -0.44
PHGDH-212ENST00000641247 ANKRD13CQ8N6S4 541 aa12.3□□□□□ -0.44
PHGDH-212ENST00000641247 ANKLE1Q8NAG6 615 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms