RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, human

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VEGFA-231	ENST00000640499	ADGRA1	Q86SQ6	560 aa		32.58	■■■□□ 2.81
VEGFA-231	ENST00000640499	JMY	Q8N9B5	988 aa		32.58	■■■□□ 2.81
VEGFA-231	ENST00000640499	PAPPA2	Q9BXP8	1791 aa		32.58	■■■□□ 2.81
VEGFA-231	ENST00000640499	DOCK2	Q92608	1830 aa		32.57	■■■□□ 2.8
VEGFA-231	ENST00000640499	BTD	P43251	543 aa		32.57	■■■□□ 2.8
VEGFA-231	ENST00000640499	HUNK	P57058	714 aa		32.57	■■■□□ 2.8
VEGFA-231	ENST00000640499	RHBDL3	P58872	404 aa		32.57	■■■□□ 2.8
VEGFA-231	ENST00000640499	TNFAIP1	Q13829	316 aa		32.57	■■■□□ 2.8
VEGFA-231	ENST00000640499	CYP4F22	Q6NT55	531 aa		32.57	■■■□□ 2.8
VEGFA-231	ENST00000640499	OTUD7A	Q8TE49	926 aa	Predicted RBP	32.57	■■■□□ 2.8
VEGFA-231	ENST00000640499	EDC3	Q96F86	508 aa	Known RBP	32.57	■■■□□ 2.8
VEGFA-231	ENST00000640499	HHIPL1	Q96JK4	782 aa		32.57	■■■□□ 2.8
VEGFA-231	ENST00000640499	BOLA2	Q9H3K6	86 aa		32.57	■■■□□ 2.8
VEGFA-231	ENST00000640499	FAM198A	Q9UFP1	575 aa		32.57	■■■□□ 2.8
VEGFA-231	ENST00000640499	MAST2	Q6P0Q8	1798 aa		32.56	■■■□□ 2.8
VEGFA-231	ENST00000640499	FAM83A	Q86UY5	434 aa		32.56	■■■□□ 2.8
VEGFA-231	ENST00000640499	SLF2	Q8IX21	1173 aa		32.56	■■■□□ 2.8
VEGFA-231	ENST00000640499	RFX7	Q2KHR2	1363 aa		32.56	■■■□□ 2.8
VEGFA-231	ENST00000640499	UBE2Q2L	H0YL09	131 aa		32.55	■■■□□ 2.8
VEGFA-231	ENST00000640499	FKBP1B	P68106	108 aa		32.55	■■■□□ 2.8
VEGFA-231	ENST00000640499	GSTO1	P78417	241 aa		32.55	■■■□□ 2.8
VEGFA-231	ENST00000640499	ZFPM1	Q8IX07	1006 aa		32.55	■■■□□ 2.8
VEGFA-231	ENST00000640499	GCC1	Q96CN9	775 aa		32.55	■■■□□ 2.8
VEGFA-231	ENST00000640499	PCNT	O95613	3336 aa		32.54	■■■□□ 2.8
VEGFA-231	ENST00000640499	PRKG1	Q13976	671 aa		32.54	■■■□□ 2.8
VEGFA-231	ENST00000640499	NAA16	Q6N069	864 aa	Predicted RBP	32.54	■■■□□ 2.8
VEGFA-231	ENST00000640499	WDHD1	O75717	1129 aa	Predicted RBP	32.53	■■■□□ 2.8
VEGFA-231	ENST00000640499	LDHC	P07864	332 aa		32.53	■■■□□ 2.8
VEGFA-231	ENST00000640499	TNNI2	P48788	182 aa		32.53	■■■□□ 2.8
VEGFA-231	ENST00000640499	TSHZ3	Q63HK5	1081 aa		32.53	■■■□□ 2.8
VEGFA-231	ENST00000640499	SMC5	Q8IY18	1101 aa		32.53	■■■□□ 2.8
VEGFA-231	ENST00000640499	CAPNS2	Q96L46	248 aa		32.53	■■■□□ 2.8
VEGFA-231	ENST00000640499	DNAJC2	Q99543	621 aa	Known RBP	32.53	■■■□□ 2.8
VEGFA-231	ENST00000640499	HAUS7	Q99871	368 aa		32.53	■■■□□ 2.8
VEGFA-231	ENST00000640499	RWDD1	Q9H446	243 aa	Predicted RBP	32.53	■■■□□ 2.8
VEGFA-231	ENST00000640499	ECHDC1	Q9NTX5	307 aa		32.53	■■■□□ 2.8
VEGFA-231	ENST00000640499	TMOD2	Q9NZR1	351 aa		32.53	■■■□□ 2.8
VEGFA-231	ENST00000640499	WDR33	Q9C0J8	1336 aa	Known RBP	32.52	■■■□□ 2.8
VEGFA-231	ENST00000640499	GOLIM4	O00461	696 aa		32.52	■■■□□ 2.8
VEGFA-231	ENST00000640499	IDH1	O75874	414 aa	Known RBP	32.52	■■■□□ 2.8
VEGFA-231	ENST00000640499	NF2	P35240	595 aa		32.52	■■■□□ 2.8
VEGFA-231	ENST00000640499	SUPT20HL1	Q3ZLR7	823 aa		32.52	■■■□□ 2.8
VEGFA-231	ENST00000640499	ANKRD45	Q5TZF3	282 aa		32.52	■■■□□ 2.8
VEGFA-231	ENST00000640499	IDI2	Q9BXS1	227 aa		32.52	■■■□□ 2.8
VEGFA-231	ENST00000640499	SALL3	Q9BXA9	1300 aa		32.51	■■■□□ 2.8
VEGFA-231	ENST00000640499	IGSF3	O75054	1194 aa		32.51	■■■□□ 2.79
VEGFA-231	ENST00000640499	FAM151A	Q8WW52	585 aa		32.51	■■■□□ 2.79
VEGFA-231	ENST00000640499	DDX4	Q9NQI0	724 aa	Known RBP	32.51	■■■□□ 2.79
VEGFA-231	ENST00000640499	FAM155A	B1AL88	458 aa	Predicted RBP	32.5	■■■□□ 2.79
VEGFA-231	ENST00000640499	USP2	O75604	605 aa	Predicted RBP	32.5	■■■□□ 2.79
VEGFA-231	ENST00000640499	TCP10	Q12799	353 aa		32.5	■■■□□ 2.79
VEGFA-231	ENST00000640499	MAP3K11	Q16584	847 aa		32.5	■■■□□ 2.79
VEGFA-231	ENST00000640499	LDLRAD1	Q5T700	205 aa		32.5	■■■□□ 2.79
VEGFA-231	ENST00000640499	RGMB	Q6NW40	437 aa		32.5	■■■□□ 2.79
VEGFA-231	ENST00000640499	PPP4C	P60510	307 aa		32.49	■■■□□ 2.79
VEGFA-231	ENST00000640499	ANGEL1	Q9UNK9	670 aa	Known RBP	32.49	■■■□□ 2.79
VEGFA-231	ENST00000640499	CYP7A1	P22680	504 aa		32.48	■■■□□ 2.79
VEGFA-231	ENST00000640499	RGS3	P49796	1198 aa		32.48	■■■□□ 2.79
VEGFA-231	ENST00000640499	TTLL12	Q14166	644 aa	Predicted RBP	32.48	■■■□□ 2.79
VEGFA-231	ENST00000640499	TTF1	Q15361	905 aa	Predicted RBP	32.48	■■■□□ 2.79
VEGFA-231	ENST00000640499	SH3BP5L	Q7L8J4	393 aa		32.48	■■■□□ 2.79
VEGFA-231	ENST00000640499	MAGEB6	Q8N7X4	407 aa		32.48	■■■□□ 2.79
VEGFA-231	ENST00000640499	PAG1	Q9NWQ8	432 aa		32.48	■■■□□ 2.79
VEGFA-231	ENST00000640499	AOC2	O75106	756 aa		32.47	■■■□□ 2.79
VEGFA-231	ENST00000640499	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	32.47	■■■□□ 2.79
VEGFA-231	ENST00000640499	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	32.47	■■■□□ 2.79
VEGFA-231	ENST00000640499	ZIC5	Q96T25	663 aa		32.47	■■■□□ 2.79
VEGFA-231	ENST00000640499	AATF	Q9NY61	560 aa	Known RBP eCLIP	32.47	■■■□□ 2.79
VEGFA-231	ENST00000640499	RPAP1	Q9BWH6	1393 aa	Predicted RBP	32.46	■■■□□ 2.79
VEGFA-231	ENST00000640499	MAP3K12	Q12852	859 aa		32.46	■■■□□ 2.79
VEGFA-231	ENST00000640499	GRM1	Q13255	1194 aa		32.46	■■■□□ 2.79
VEGFA-231	ENST00000640499	THSD7B	Q9C0I4	1608 aa		32.46	■■■□□ 2.79
VEGFA-231	ENST00000640499	ENTPD3	O75355	529 aa		32.45	■■■□□ 2.79
VEGFA-231	ENST00000640499	CHGB	P05060	677 aa		32.45	■■■□□ 2.79
VEGFA-231	ENST00000640499	ECE1	P42892	770 aa		32.45	■■■□□ 2.79
VEGFA-231	ENST00000640499	ZNF157	P51786	506 aa	Predicted RBP	32.45	■■■□□ 2.79
VEGFA-231	ENST00000640499	SLFNL1	Q499Z3	407 aa		32.45	■■■□□ 2.79
VEGFA-231	ENST00000640499	ARMC9	Q7Z3E5	817 aa		32.45	■■■□□ 2.79
VEGFA-231	ENST00000640499	PI4K2B	Q8TCG2	481 aa		32.45	■■■□□ 2.79
VEGFA-231	ENST00000640499	TCRBV5S4A2T	A0A5A2	114 aa		32.44	■■■□□ 2.78
VEGFA-231	ENST00000640499	PDE6A	P16499	860 aa		32.44	■■■□□ 2.78
VEGFA-231	ENST00000640499	DYNLL1	P63167	89 aa	Known RBP	32.44	■■■□□ 2.78
VEGFA-231	ENST00000640499	PPP1R12B	O60237	982 aa	Predicted RBP	32.43	■■■□□ 2.78
VEGFA-231	ENST00000640499	MAP4K4	O95819	1239 aa	Predicted RBP	32.43	■■■□□ 2.78
VEGFA-231	ENST00000640499	B4GALNT3	Q6L9W6	998 aa		32.43	■■■□□ 2.78
VEGFA-231	ENST00000640499	RASAL3	Q86YV0	1011 aa		32.43	■■■□□ 2.78
VEGFA-231	ENST00000640499	CDK5RAP2	Q96SN8	1893 aa		32.43	■■■□□ 2.78
VEGFA-231	ENST00000640499	NPM3	O75607	178 aa	Known RBP	32.42	■■■□□ 2.78
VEGFA-231	ENST00000640499	SLC10A3	P09131	477 aa		32.42	■■■□□ 2.78
VEGFA-231	ENST00000640499	PICALM	Q13492	652 aa		32.42	■■■□□ 2.78
VEGFA-231	ENST00000640499	SLC9C2	Q5TAH2	1124 aa		32.42	■■■□□ 2.78
VEGFA-231	ENST00000640499	MIGA1	Q8NAN2	632 aa		32.42	■■■□□ 2.78
VEGFA-231	ENST00000640499	CLMN	Q96JQ2	1002 aa		32.42	■■■□□ 2.78
VEGFA-231	ENST00000640499	TTC41P	Q6P2S7	1318 aa		32.42	■■■□□ 2.78
VEGFA-231	ENST00000640499	DDTL	A6NHG4	134 aa	Predicted RBP	32.41	■■■□□ 2.78
VEGFA-231	ENST00000640499	MX1	P20591	662 aa		32.41	■■■□□ 2.78
VEGFA-231	ENST00000640499	TEX11	Q8IYF3	940 aa		32.41	■■■□□ 2.78
VEGFA-231	ENST00000640499	LNPK	Q9C0E8	428 aa		32.41	■■■□□ 2.78
VEGFA-231	ENST00000640499	ATRNL1	Q5VV63	1379 aa		32.41	■■■□□ 2.78
VEGFA-231	ENST00000640499	OTOF	Q9HC10	1997 aa		32.41	■■■□□ 2.78

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