RNA–Protein interactions for RNA: ENST00000639487.1

RTTN-215, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,175 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-215ENST00000639487 HOXD8P13378 290 aaPredicted RBP7.95□□□□□ -1.14
RTTN-215ENST00000639487 PPIL2Q13356 520 aa7.95□□□□□ -1.14
RTTN-215ENST00000639487 TNFAIP1Q13829 316 aa7.95□□□□□ -1.14
RTTN-215ENST00000639487 KBTBD3Q8NAB2 608 aa7.95□□□□□ -1.14
RTTN-215ENST00000639487 TAF1DQ9H5J8 278 aaPredicted RBP7.95□□□□□ -1.14
RTTN-215ENST00000639487 TRMT112Q9UI30 125 aaKnown RBP7.95□□□□□ -1.14
RTTN-215ENST00000639487 NBPF7P0C2Y1 421 aaPredicted RBP7.95□□□□□ -1.14
RTTN-215ENST00000639487 RBL2Q08999 1139 aa7.95□□□□□ -1.14
RTTN-215ENST00000639487 C16orf86Q6ZW13 317 aa7.95□□□□□ -1.14
RTTN-215ENST00000639487 CNPY4Q8N129 248 aa7.95□□□□□ -1.14
RTTN-215ENST00000639487 STAG1Q8WVM7 1258 aa7.95□□□□□ -1.14
RTTN-215ENST00000639487 ARPP21Q9UBL0 812 aaPredicted RBP7.95□□□□□ -1.14
RTTN-215ENST00000639487 RBM47A0AV96 593 aaKnown RBP7.94□□□□□ -1.14
RTTN-215ENST00000639487 TOMM70O94826 608 aa7.94□□□□□ -1.14
RTTN-215ENST00000639487 IFIT1P09914 478 aaKnown RBP7.94□□□□□ -1.14
RTTN-215ENST00000639487 CHADLQ6NUI6 762 aa7.94□□□□□ -1.14
RTTN-215ENST00000639487 FOXP4Q8IVH2 680 aaPredicted RBP7.94□□□□□ -1.14
RTTN-215ENST00000639487 RHPN1Q8TCX5 695 aa7.94□□□□□ -1.14
RTTN-215ENST00000639487 ERC2O15083 957 aa7.94□□□□□ -1.14
RTTN-215ENST00000639487 SCP2P22307 547 aa7.94□□□□□ -1.14
RTTN-215ENST00000639487 PKN2Q16513 984 aaKnown RBP7.94□□□□□ -1.14
RTTN-215ENST00000639487 USP6NLQ92738 828 aa7.94□□□□□ -1.14
RTTN-215ENST00000639487 RBM42Q9BTD8 480 aaKnown RBP7.94□□□□□ -1.14
RTTN-215ENST00000639487 ECE2O60344 883 aa7.94□□□□□ -1.14
RTTN-215ENST00000639487 ZNF710Q8N1W2 664 aa7.94□□□□□ -1.14
RTTN-215ENST00000639487 LARGE2Q8N3Y3 721 aa7.94□□□□□ -1.14
RTTN-215ENST00000639487 GMCL1Q96IK5 515 aa7.94□□□□□ -1.14
RTTN-215ENST00000639487 CCDC17Q96LX7 622 aa7.94□□□□□ -1.14
RTTN-215ENST00000639487 HACL1Q9UJ83 578 aa7.94□□□□□ -1.14
RTTN-215ENST00000639487 SCN10AQ9Y5Y9 1956 aa7.93□□□□□ -1.14
RTTN-215ENST00000639487 CIAPIN1Q6FI81 312 aa7.93□□□□□ -1.14
RTTN-215ENST00000639487 ZNF384Q8TF68 577 aa7.93□□□□□ -1.14
RTTN-215ENST00000639487 CELF1Q92879 486 aaKnown RBP7.93□□□□□ -1.14
RTTN-215ENST00000639487 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.93□□□□□ -1.14
RTTN-215ENST00000639487 CDCA7LQ96GN5 454 aa7.93□□□□□ -1.14
RTTN-215ENST00000639487 THUMPD2Q9BTF0 503 aaKnown RBP7.93□□□□□ -1.14
RTTN-215ENST00000639487 A0A0G2JLL6 359 aaPredicted RBP7.92□□□□□ -1.14
RTTN-215ENST00000639487 ALDH1A1P00352 501 aa7.92□□□□□ -1.14
RTTN-215ENST00000639487 RBM25P49756 843 aaKnown RBP7.92□□□□□ -1.14
RTTN-215ENST00000639487 PPATQ06203 517 aa7.92□□□□□ -1.14
RTTN-215ENST00000639487 FKBP5Q13451 457 aaPredicted RBP7.92□□□□□ -1.14
RTTN-215ENST00000639487 CCDC57Q2TAC2 916 aa7.92□□□□□ -1.14
RTTN-215ENST00000639487 APOBEC3HQ6NTF7 200 aaKnown RBP7.92□□□□□ -1.14
RTTN-215ENST00000639487 PRRT2Q7Z6L0 340 aaPredicted RBP7.92□□□□□ -1.14
RTTN-215ENST00000639487 SECISBP2LQ93073 1101 aaKnown RBP7.92□□□□□ -1.14
RTTN-215ENST00000639487 LRRCC1Q9C099 1032 aa7.92□□□□□ -1.14
RTTN-215ENST00000639487 Q9Y3F1 56 aa7.92□□□□□ -1.14
RTTN-215ENST00000639487 FOXP2O15409 715 aa7.92□□□□□ -1.14
RTTN-215ENST00000639487 ENPEPQ07075 957 aa7.92□□□□□ -1.14
RTTN-215ENST00000639487 TTC22Q5TAA0 569 aa7.92□□□□□ -1.14
RTTN-215ENST00000639487 DNAJC5GQ8N7S2 189 aa7.92□□□□□ -1.14
RTTN-215ENST00000639487 IPO4Q8TEX9 1081 aaKnown RBP7.92□□□□□ -1.14
RTTN-215ENST00000639487 BBXQ8WY36 941 aaPredicted RBP7.92□□□□□ -1.14
RTTN-215ENST00000639487 MEIS3Q99687 375 aa7.92□□□□□ -1.14
RTTN-215ENST00000639487 NYAP2Q9P242 653 aa7.92□□□□□ -1.14
RTTN-215ENST00000639487 GPATCH3Q96I76 525 aa7.92□□□□□ -1.14
RTTN-215ENST00000639487 ECHDC1Q9NTX5 307 aa7.92□□□□□ -1.14
RTTN-215ENST00000639487 EMSYQ7Z589 1322 aa7.91□□□□□ -1.14
RTTN-215ENST00000639487 SPDYE5A6NIY4 337 aa7.91□□□□□ -1.14
RTTN-215ENST00000639487 C19orf81C9J6K1 198 aa7.91□□□□□ -1.14
RTTN-215ENST00000639487 CTNND1O60716 968 aaKnown RBP7.91□□□□□ -1.14
RTTN-215ENST00000639487 HIBADHP31937 336 aaKnown RBP7.91□□□□□ -1.14
RTTN-215ENST00000639487 XRRA1Q6P2D8 792 aa7.91□□□□□ -1.14
RTTN-215ENST00000639487 NIM1KQ8IY84 436 aa7.91□□□□□ -1.14
RTTN-215ENST00000639487 NLGN2Q8NFZ4 835 aa7.91□□□□□ -1.14
RTTN-215ENST00000639487 APPBP2Q92624 585 aa7.91□□□□□ -1.14
RTTN-215ENST00000639487 ANK1P16157 1881 aa7.91□□□□□ -1.14
RTTN-215ENST00000639487 DPP8Q6V1X1 898 aaPredicted RBP7.91□□□□□ -1.14
RTTN-215ENST00000639487 DAGLBQ8NCG7 672 aa7.91□□□□□ -1.14
RTTN-215ENST00000639487 EMID1Q96A84 441 aaPredicted RBP7.91□□□□□ -1.14
RTTN-215ENST00000639487 HDAC9Q9UKV0 1011 aa7.91□□□□□ -1.14
RTTN-215ENST00000639487 SGMS1Q86VZ5 419 aa7.9□□□□□ -1.14
RTTN-215ENST00000639487 PLEKHM2Q8IWE5 1019 aa7.9□□□□□ -1.14
RTTN-215ENST00000639487 LPAR1Q92633 364 aa7.9□□□□□ -1.14
RTTN-215ENST00000639487 RABGAP1Q9Y3P9 1069 aa7.9□□□□□ -1.14
RTTN-215ENST00000639487 ESYT2A0FGR8 921 aa7.9□□□□□ -1.14
RTTN-215ENST00000639487 MUTP22033 750 aa7.9□□□□□ -1.14
RTTN-215ENST00000639487 FMR1Q06787 632 aaKnown RBP eCLIP7.9□□□□□ -1.14
RTTN-215ENST00000639487 ATP2B3Q16720 1220 aa7.9□□□□□ -1.14
RTTN-215ENST00000639487 FAM161AQ3B820 660 aa7.9□□□□□ -1.14
RTTN-215ENST00000639487 MB21D1Q8N884 522 aa7.9□□□□□ -1.14
RTTN-215ENST00000639487 SPATA5Q8NB90 893 aa7.9□□□□□ -1.14
RTTN-215ENST00000639487 RPLP2P05387 115 aaKnown RBP7.89□□□□□ -1.15
RTTN-215ENST00000639487 NCLP19338 710 aaKnown RBP7.89□□□□□ -1.15
RTTN-215ENST00000639487 TRAF1Q13077 416 aa7.89□□□□□ -1.15
RTTN-215ENST00000639487 OLFML2BQ68BL8 750 aa7.89□□□□□ -1.15
RTTN-215ENST00000639487 CCDC102BQ68D86 513 aa7.89□□□□□ -1.15
RTTN-215ENST00000639487 MOXD1Q6UVY6 613 aa7.89□□□□□ -1.15
RTTN-215ENST00000639487 LMBR1LQ6UX01 489 aa7.89□□□□□ -1.15
RTTN-215ENST00000639487 NIPA1Q7RTP0 329 aa7.89□□□□□ -1.15
RTTN-215ENST00000639487 LZTS2Q9BRK4 669 aa7.89□□□□□ -1.15
RTTN-215ENST00000639487 DBNLQ9UJU6 430 aaKnown RBP7.89□□□□□ -1.15
RTTN-215ENST00000639487 LRRFIP2Q9Y608 721 aaKnown RBP7.89□□□□□ -1.15
RTTN-215ENST00000639487 RPTORQ8N122 1335 aa7.89□□□□□ -1.15
RTTN-215ENST00000639487 FOXR2Q6PJQ5 311 aa7.89□□□□□ -1.15
RTTN-215ENST00000639487 REPS2Q8NFH8 660 aa7.89□□□□□ -1.15
RTTN-215ENST00000639487 HELBQ8NG08 1087 aaPredicted RBP7.89□□□□□ -1.15
RTTN-215ENST00000639487 KIAA1683Q9H0B3 1180 aa7.89□□□□□ -1.15
RTTN-215ENST00000639487 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.89□□□□□ -1.15
RTTN-215ENST00000639487 PNMA6EA0A0J9YXQ4 647 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms