RNA–Protein interactions for RNA: ENST00000639083.1

TARDBP-230, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TARDBP, Length 2,269 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-230ENST00000639083 ISY1Q9ULR0 285 aaKnown RBP12.68□□□□□ -0.38
TARDBP-230ENST00000639083 ANGEL1Q9UNK9 670 aaKnown RBP12.68□□□□□ -0.38
TARDBP-230ENST00000639083 TCHHQ07283 1943 aa12.68□□□□□ -0.38
TARDBP-230ENST00000639083 XDHP47989 1333 aa12.67□□□□□ -0.38
TARDBP-230ENST00000639083 SALL1Q9NSC2 1324 aa12.67□□□□□ -0.38
TARDBP-230ENST00000639083 FOSBP53539 338 aa12.67□□□□□ -0.38
TARDBP-230ENST00000639083 ZNF445P59923 1031 aa12.67□□□□□ -0.38
TARDBP-230ENST00000639083 MFSD6Q6ZSS7 791 aa12.67□□□□□ -0.38
TARDBP-230ENST00000639083 IGDCC4Q8TDY8 1250 aa12.67□□□□□ -0.38
TARDBP-230ENST00000639083 RBM17Q96I25 401 aaKnown RBP12.67□□□□□ -0.38
TARDBP-230ENST00000639083 GPR101Q96P66 508 aaPredicted RBP12.67□□□□□ -0.38
TARDBP-230ENST00000639083 SENP2Q9HC62 589 aa12.67□□□□□ -0.38
TARDBP-230ENST00000639083 SH2B2O14492 632 aaPredicted RBP12.67□□□□□ -0.38
TARDBP-230ENST00000639083 KDM4AO75164 1064 aa12.67□□□□□ -0.38
TARDBP-230ENST00000639083 FDPSP14324 419 aaKnown RBP12.67□□□□□ -0.38
TARDBP-230ENST00000639083 GPSM2P81274 684 aa12.67□□□□□ -0.38
TARDBP-230ENST00000639083 CHMP4CQ96CF2 233 aa12.67□□□□□ -0.38
TARDBP-230ENST00000639083 PANK2Q9BZ23 570 aa12.67□□□□□ -0.38
TARDBP-230ENST00000639083 PDS5AQ29RF7 1337 aaKnown RBP12.66□□□□□ -0.38
TARDBP-230ENST00000639083 MINDY4BA8MYZ0 360 aa12.66□□□□□ -0.38
TARDBP-230ENST00000639083 RXRBP28702 533 aa12.66□□□□□ -0.38
TARDBP-230ENST00000639083 UBE2HP62256 183 aa12.66□□□□□ -0.38
TARDBP-230ENST00000639083 RRP12Q5JTH9 1297 aaKnown RBP12.66□□□□□ -0.38
TARDBP-230ENST00000639083 COL23A1Q86Y22 540 aaPredicted RBP12.66□□□□□ -0.38
TARDBP-230ENST00000639083 AKT1S1Q96B36 256 aa12.66□□□□□ -0.38
TARDBP-230ENST00000639083 CNNM2Q9H8M5 875 aa12.66□□□□□ -0.38
TARDBP-230ENST00000639083 TOMM22Q9NS69 142 aa12.66□□□□□ -0.38
TARDBP-230ENST00000639083 TFIP11Q9UBB9 837 aaKnown RBP12.66□□□□□ -0.38
TARDBP-230ENST00000639083 SMIM22K7EJ46 135 aa12.65□□□□□ -0.38
TARDBP-230ENST00000639083 DHX16O60231 1041 aaKnown RBP12.65□□□□□ -0.38
TARDBP-230ENST00000639083 HMGB2P26583 209 aaKnown RBP12.65□□□□□ -0.38
TARDBP-230ENST00000639083 KRT85P78386 507 aa12.65□□□□□ -0.38
TARDBP-230ENST00000639083 PPARAQ07869 468 aa12.65□□□□□ -0.38
TARDBP-230ENST00000639083 STAG1Q8WVM7 1258 aa12.65□□□□□ -0.38
TARDBP-230ENST00000639083 TMEM87BQ96K49 555 aa12.65□□□□□ -0.38
TARDBP-230ENST00000639083 KIF3AQ9Y496 699 aa12.65□□□□□ -0.38
TARDBP-230ENST00000639083 SYCE3A1L190 88 aa12.65□□□□□ -0.38
TARDBP-230ENST00000639083 RXRAP19793 462 aa12.65□□□□□ -0.38
TARDBP-230ENST00000639083 RESTQ13127 1097 aa12.65□□□□□ -0.38
TARDBP-230ENST00000639083 CSPP1Q1MSJ5 1256 aa12.65□□□□□ -0.38
TARDBP-230ENST00000639083 TMEM67Q5HYA8 995 aa12.65□□□□□ -0.38
TARDBP-230ENST00000639083 KRT23Q9C075 422 aa12.65□□□□□ -0.38
TARDBP-230ENST00000639083 LY9Q9HBG7 655 aa12.65□□□□□ -0.38
TARDBP-230ENST00000639083 CACNA1SQ13698 1873 aa12.64□□□□□ -0.39
TARDBP-230ENST00000639083 CPLX1O14810 134 aa12.64□□□□□ -0.39
TARDBP-230ENST00000639083 IFIT3O14879 490 aaKnown RBP12.64□□□□□ -0.39
TARDBP-230ENST00000639083 BBOX1O75936 387 aa12.64□□□□□ -0.39
TARDBP-230ENST00000639083 HOXA10P31260 410 aaPredicted RBP12.64□□□□□ -0.39
TARDBP-230ENST00000639083 ADD1P35611 737 aaKnown RBP12.64□□□□□ -0.39
TARDBP-230ENST00000639083 GUCY1B3Q02153 619 aa12.64□□□□□ -0.39
TARDBP-230ENST00000639083 APOA5Q6Q788 366 aa12.64□□□□□ -0.39
TARDBP-230ENST00000639083 TTC6Q86TZ1 520 aa12.64□□□□□ -0.39
TARDBP-230ENST00000639083 NLGN1Q8N2Q7 840 aa12.64□□□□□ -0.39
TARDBP-230ENST00000639083 TDRD7Q8NHU6 1098 aaKnown RBP12.64□□□□□ -0.39
TARDBP-230ENST00000639083 AATFQ9NY61 560 aaKnown RBP eCLIP12.64□□□□□ -0.39
TARDBP-230ENST00000639083 KLRG2A4D1S0 409 aaPredicted RBP12.64□□□□□ -0.39
TARDBP-230ENST00000639083 UFL1O94874 794 aa12.64□□□□□ -0.39
TARDBP-230ENST00000639083 NFXL1Q6ZNB6 911 aa12.64□□□□□ -0.39
TARDBP-230ENST00000639083 ZKSCAN3Q9BRR0 538 aa12.64□□□□□ -0.39
TARDBP-230ENST00000639083 ZSCAN16Q9H4T2 348 aaPredicted RBP12.64□□□□□ -0.39
TARDBP-230ENST00000639083 CYP2D7A0A087X1C5 515 aa12.63□□□□□ -0.39
TARDBP-230ENST00000639083 LIFRP42702 1097 aa12.63□□□□□ -0.39
TARDBP-230ENST00000639083 METAP2P50579 478 aaKnown RBP eCLIP12.63□□□□□ -0.39
TARDBP-230ENST00000639083 ZNF804AQ7Z570 1209 aa12.63□□□□□ -0.39
TARDBP-230ENST00000639083 MICU3Q86XE3 530 aa12.63□□□□□ -0.39
TARDBP-230ENST00000639083 MYL10Q9BUA6 226 aa12.63□□□□□ -0.39
TARDBP-230ENST00000639083 BRIP1Q9BX63 1249 aa12.63□□□□□ -0.39
TARDBP-230ENST00000639083 RNF41Q9H4P4 317 aaPredicted RBP12.63□□□□□ -0.39
TARDBP-230ENST00000639083 ORC3Q9UBD5 711 aaPredicted RBP12.63□□□□□ -0.39
TARDBP-230ENST00000639083 ANAPC4Q9UJX5 808 aa12.63□□□□□ -0.39
TARDBP-230ENST00000639083 GGA1Q9UJY5 639 aa12.63□□□□□ -0.39
TARDBP-230ENST00000639083 ATP2B4P23634 1241 aa12.63□□□□□ -0.39
TARDBP-230ENST00000639083 SPTY2D1Q68D10 685 aaPredicted RBP12.63□□□□□ -0.39
TARDBP-230ENST00000639083 C15orf52Q6ZUT6 534 aaKnown RBP12.63□□□□□ -0.39
TARDBP-230ENST00000639083 SGMS1Q86VZ5 419 aa12.63□□□□□ -0.39
TARDBP-230ENST00000639083 DZIP1Q86YF9 867 aaKnown RBP12.63□□□□□ -0.39
TARDBP-230ENST00000639083 CCDC144CPQ8IYA2 1237 aa12.63□□□□□ -0.39
TARDBP-230ENST00000639083 WDR66Q8TBY9 1149 aa12.63□□□□□ -0.39
TARDBP-230ENST00000639083 SYAP1Q96A49 352 aaPredicted RBP12.63□□□□□ -0.39
TARDBP-230ENST00000639083 CRAMP1Q96RY5 1269 aa12.63□□□□□ -0.39
TARDBP-230ENST00000639083 SCAND2PQ9GZW5 306 aaPredicted RBP12.63□□□□□ -0.39
TARDBP-230ENST00000639083 USP17L12C9JPN9 530 aa12.62□□□□□ -0.39
TARDBP-230ENST00000639083 USP17L21D6R901 530 aa12.62□□□□□ -0.39
TARDBP-230ENST00000639083 ZBTB22O15209 634 aa12.62□□□□□ -0.39
TARDBP-230ENST00000639083 ZBTB43O43298 467 aa12.62□□□□□ -0.39
TARDBP-230ENST00000639083 CDC27P30260 824 aa12.62□□□□□ -0.39
TARDBP-230ENST00000639083 GRIK5Q16478 980 aa12.62□□□□□ -0.39
TARDBP-230ENST00000639083 OTUD7BQ6GQQ9 843 aa12.62□□□□□ -0.39
TARDBP-230ENST00000639083 CTR9Q6PD62 1173 aa12.62□□□□□ -0.39
TARDBP-230ENST00000639083 LRSAM1Q6UWE0 723 aa12.62□□□□□ -0.39
TARDBP-230ENST00000639083 SPATA32Q96LK8 384 aa12.62□□□□□ -0.39
TARDBP-230ENST00000639083 RTN4Q9NQC3 1192 aaKnown RBP12.62□□□□□ -0.39
TARDBP-230ENST00000639083 POLLQ9UGP5 575 aa12.62□□□□□ -0.39
TARDBP-230ENST00000639083 CCDC69A6NI79 296 aa12.62□□□□□ -0.39
TARDBP-230ENST00000639083 LDHBP07195 334 aaKnown RBP12.62□□□□□ -0.39
TARDBP-230ENST00000639083 GIMAP6Q6P9H5 292 aa12.62□□□□□ -0.39
TARDBP-230ENST00000639083 LEO1Q8WVC0 666 aaPredicted RBP12.62□□□□□ -0.39
TARDBP-230ENST00000639083 CD209Q9NNX6 404 aa12.62□□□□□ -0.39
TARDBP-230ENST00000639083 GJB4Q9NTQ9 266 aa12.62□□□□□ -0.39
TARDBP-230ENST00000639083 SLC12A7Q9Y666 1083 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms