RNA–Protein interactions for RNA: ENST00000638573.1

COLCA2-206, Transcript of colorectal cancer associated 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COLCA2, Length 1,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-206ENST00000638573 MRIQ9BWK5 157 aa20.29■□□□□ 0.84
COLCA2-206ENST00000638573 GNL3LQ9NVN8 582 aaKnown RBP20.29■□□□□ 0.84
COLCA2-206ENST00000638573 FAM198AQ9UFP1 575 aa20.29■□□□□ 0.84
COLCA2-206ENST00000638573 DENND2AQ9ULE3 1009 aa20.29■□□□□ 0.84
COLCA2-206ENST00000638573 COG6Q9Y2V7 657 aa20.29■□□□□ 0.84
COLCA2-206ENST00000638573 AKAP11Q9UKA4 1901 aa20.29■□□□□ 0.84
COLCA2-206ENST00000638573 GPR25O00155 361 aa20.28■□□□□ 0.84
COLCA2-206ENST00000638573 POLA2Q14181 598 aa20.28■□□□□ 0.84
COLCA2-206ENST00000638573 TBC1D9Q6ZT07 1266 aa20.28■□□□□ 0.84
COLCA2-206ENST00000638573 REM2Q8IYK8 340 aaPredicted RBP20.28■□□□□ 0.84
COLCA2-206ENST00000638573 ZKSCAN4Q969J2 545 aaPredicted RBP20.28■□□□□ 0.84
COLCA2-206ENST00000638573 TMOD2Q9NZR1 351 aa20.28■□□□□ 0.84
COLCA2-206ENST00000638573 ABCF2Q9UG63 623 aa20.28■□□□□ 0.84
COLCA2-206ENST00000638573 SALL1Q9NSC2 1324 aa20.27■□□□□ 0.84
COLCA2-206ENST00000638573 MANSC4A6NHS7 340 aaPredicted RBP20.27■□□□□ 0.84
COLCA2-206ENST00000638573 ZBTB48P10074 688 aaPredicted RBP20.27■□□□□ 0.84
COLCA2-206ENST00000638573 OTUD5Q96G74 571 aa20.27■□□□□ 0.84
COLCA2-206ENST00000638573 USP40Q9NVE5 1235 aa20.27■□□□□ 0.84
COLCA2-206ENST00000638573 HMG20BQ9P0W2 317 aa20.27■□□□□ 0.84
COLCA2-206ENST00000638573 SNCAIPQ9Y6H5 919 aa20.27■□□□□ 0.84
COLCA2-206ENST00000638573 MYH13Q9UKX3 1938 aa20.26■□□□□ 0.83
COLCA2-206ENST00000638573 ZBTB7BO15156 539 aaPredicted RBP20.26■□□□□ 0.83
COLCA2-206ENST00000638573 INPP5BP32019 993 aa20.26■□□□□ 0.83
COLCA2-206ENST00000638573 MAP3K9P80192 1104 aa20.26■□□□□ 0.83
COLCA2-206ENST00000638573 CAP1Q01518 475 aa20.26■□□□□ 0.83
COLCA2-206ENST00000638573 CTU1Q7Z7A3 348 aaKnown RBP20.26■□□□□ 0.83
COLCA2-206ENST00000638573 MS4A4AQ96JQ5 239 aa20.26■□□□□ 0.83
COLCA2-206ENST00000638573 WRNIP1Q96S55 665 aa20.26■□□□□ 0.83
COLCA2-206ENST00000638573 SEMA3EO15041 775 aa20.25■□□□□ 0.83
COLCA2-206ENST00000638573 G3BP1Q13283 466 aaKnown RBP eCLIP20.25■□□□□ 0.83
COLCA2-206ENST00000638573 FAM83AQ86UY5 434 aa20.25■□□□□ 0.83
COLCA2-206ENST00000638573 BRI3BPQ8WY22 251 aa20.25■□□□□ 0.83
COLCA2-206ENST00000638573 AKAP2Q9Y2D5 859 aa20.25■□□□□ 0.83
COLCA2-206ENST00000638573 MCAMP43121 646 aa20.24■□□□□ 0.83
COLCA2-206ENST00000638573 ATP8B2P98198 1209 aa20.24■□□□□ 0.83
COLCA2-206ENST00000638573 C20orf194Q5TEA3 1177 aa20.24■□□□□ 0.83
COLCA2-206ENST00000638573 SH3BP5LQ7L8J4 393 aa20.24■□□□□ 0.83
COLCA2-206ENST00000638573 SSH3Q8TE77 659 aa20.24■□□□□ 0.83
COLCA2-206ENST00000638573 DBNDD2Q9BQY9 259 aa20.24■□□□□ 0.83
COLCA2-206ENST00000638573 DDX4Q9NQI0 724 aaKnown RBP20.24■□□□□ 0.83
COLCA2-206ENST00000638573 SNRKQ9NRH2 765 aa20.24■□□□□ 0.83
COLCA2-206ENST00000638573 TLR7Q9NYK1 1049 aaKnown RBP20.24■□□□□ 0.83
COLCA2-206ENST00000638573 GAKO14976 1311 aa20.24■□□□□ 0.83
COLCA2-206ENST00000638573 MECOMQ03112 1051 aa20.23■□□□□ 0.83
COLCA2-206ENST00000638573 CRHR2Q13324 411 aa20.23■□□□□ 0.83
COLCA2-206ENST00000638573 FKBP1CQ5VVH2 108 aa20.23■□□□□ 0.83
COLCA2-206ENST00000638573 DZIP1Q86YF9 867 aaKnown RBP20.23■□□□□ 0.83
COLCA2-206ENST00000638573 FAM151AQ8WW52 585 aa20.23■□□□□ 0.83
COLCA2-206ENST00000638573 SURF6O75683 361 aaKnown RBP20.22■□□□□ 0.83
COLCA2-206ENST00000638573 BTDP43251 543 aa20.22■□□□□ 0.83
COLCA2-206ENST00000638573 RGS3P49796 1198 aa20.22■□□□□ 0.83
COLCA2-206ENST00000638573 SOX10P56693 466 aa20.22■□□□□ 0.83
COLCA2-206ENST00000638573 GORABQ5T7V8 394 aa20.22■□□□□ 0.83
COLCA2-206ENST00000638573 SPATA5Q8NB90 893 aa20.22■□□□□ 0.83
COLCA2-206ENST00000638573 CSADQ9Y600 493 aa20.22■□□□□ 0.83
COLCA2-206ENST00000638573 RFX7Q2KHR2 1363 aa20.21■□□□□ 0.83
COLCA2-206ENST00000638573 RPAP1Q9BWH6 1393 aaPredicted RBP20.21■□□□□ 0.83
COLCA2-206ENST00000638573 FKTNO75072 461 aa20.21■□□□□ 0.83
COLCA2-206ENST00000638573 ARID4AP29374 1257 aaPredicted RBP20.21■□□□□ 0.83
COLCA2-206ENST00000638573 OS9Q13438 667 aaPredicted RBP20.21■□□□□ 0.83
COLCA2-206ENST00000638573 TNNI3KQ59H18 835 aa20.21■□□□□ 0.83
COLCA2-206ENST00000638573 CEP85Q6P2H3 762 aa20.21■□□□□ 0.83
COLCA2-206ENST00000638573 FAM43AQ8N2R8 423 aa20.21■□□□□ 0.83
COLCA2-206ENST00000638573 CFHR5Q9BXR6 569 aa20.21■□□□□ 0.83
COLCA2-206ENST00000638573 FPGT-TNNI3KV9GXZ4 949 aa20.21■□□□□ 0.83
COLCA2-206ENST00000638573 CCL15-CCL14A0A0B4J2E2 113 aa20.2■□□□□ 0.82
COLCA2-206ENST00000638573 TESPA1A2RU30 521 aaPredicted RBP20.2■□□□□ 0.82
COLCA2-206ENST00000638573 SPDYE5A6NIY4 337 aa20.2■□□□□ 0.82
COLCA2-206ENST00000638573 UNCXA6NJT0 531 aa20.2■□□□□ 0.82
COLCA2-206ENST00000638573 WDHD1O75717 1129 aaPredicted RBP20.2■□□□□ 0.82
COLCA2-206ENST00000638573 PICALMQ13492 652 aa20.2■□□□□ 0.82
COLCA2-206ENST00000638573 CCL15Q16663 113 aa20.2■□□□□ 0.82
COLCA2-206ENST00000638573 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.2■□□□□ 0.82
COLCA2-206ENST00000638573 HPS5Q9UPZ3 1129 aa20.2■□□□□ 0.82
COLCA2-206ENST00000638573 ATRNL1Q5VV63 1379 aa20.2■□□□□ 0.82
COLCA2-206ENST00000638573 DDTLA6NHG4 134 aaPredicted RBP20.19■□□□□ 0.82
COLCA2-206ENST00000638573 IRF6O14896 467 aa20.19■□□□□ 0.82
COLCA2-206ENST00000638573 RHBDL3P58872 404 aa20.19■□□□□ 0.82
COLCA2-206ENST00000638573 NDUFB9Q9Y6M9 179 aa20.19■□□□□ 0.82
COLCA2-206ENST00000638573 MROH7-TTC4A0A0A0MT08 1334 aa20.19■□□□□ 0.82
COLCA2-206ENST00000638573 PDS5AQ29RF7 1337 aaKnown RBP20.19■□□□□ 0.82
COLCA2-206ENST00000638573 FAM196BA6NMK8 535 aa20.18■□□□□ 0.82
COLCA2-206ENST00000638573 INHBEP58166 350 aa20.18■□□□□ 0.82
COLCA2-206ENST00000638573 ERICH6Q7L0X2 663 aa20.18■□□□□ 0.82
COLCA2-206ENST00000638573 ZGPATQ8N5A5 531 aaKnown RBP20.18■□□□□ 0.82
COLCA2-206ENST00000638573 CD99L2Q8TCZ2 262 aa20.18■□□□□ 0.82
COLCA2-206ENST00000638573 ZNF341Q9BYN7 854 aa20.18■□□□□ 0.82
COLCA2-206ENST00000638573 CCDC8Q9H0W5 538 aaPredicted RBP20.18■□□□□ 0.82
COLCA2-206ENST00000638573 DBNLQ9UJU6 430 aaKnown RBP20.18■□□□□ 0.82
COLCA2-206ENST00000638573 EXOC6BQ9Y2D4 811 aa20.18■□□□□ 0.82
COLCA2-206ENST00000638573 ZBTB22O15209 634 aa20.17■□□□□ 0.82
COLCA2-206ENST00000638573 ECM2O94769 699 aaPredicted RBP20.17■□□□□ 0.82
COLCA2-206ENST00000638573 ALDH1A1P00352 501 aa20.17■□□□□ 0.82
COLCA2-206ENST00000638573 CCDC84Q86UT8 332 aaPredicted RBP20.17■□□□□ 0.82
COLCA2-206ENST00000638573 NSUN4Q96CB9 384 aaKnown RBP20.17■□□□□ 0.82
COLCA2-206ENST00000638573 ZBTB40Q9NUA8 1239 aa20.17■□□□□ 0.82
COLCA2-206ENST00000638573 RAI14Q9P0K7 980 aa20.17■□□□□ 0.82
COLCA2-206ENST00000638573 BTBD19C9JJ37 291 aa20.16■□□□□ 0.82
COLCA2-206ENST00000638573 NOM1Q5C9Z4 860 aaKnown RBP20.16■□□□□ 0.82
COLCA2-206ENST00000638573 TTC39AQ5SRH9 613 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms