RNA–Protein interactions for RNA: ENST00000638029.1

CACNA1A-258, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-258ENST00000638029 NME9Q86XW9 330 aa18.27■□□□□ 0.52
CACNA1A-258ENST00000638029 MAGEB6Q8N7X4 407 aa18.27■□□□□ 0.52
CACNA1A-258ENST00000638029 NAP1L4Q99733 375 aaKnown RBP18.27■□□□□ 0.52
CACNA1A-258ENST00000638029 MX2P20592 715 aa18.27■□□□□ 0.52
CACNA1A-258ENST00000638029 SSFA2P28290 1259 aa18.27■□□□□ 0.52
CACNA1A-258ENST00000638029 NECAB1Q8N987 351 aa18.27■□□□□ 0.52
CACNA1A-258ENST00000638029 KRT23Q9C075 422 aa18.27■□□□□ 0.52
CACNA1A-258ENST00000638029 SETSIPP0DME0 302 aa18.27■□□□□ 0.52
CACNA1A-258ENST00000638029 STRN3Q13033 797 aa18.27■□□□□ 0.52
CACNA1A-258ENST00000638029 NEDD9Q14511 834 aa18.27■□□□□ 0.52
CACNA1A-258ENST00000638029 RTN1Q16799 776 aa18.27■□□□□ 0.52
CACNA1A-258ENST00000638029 STMN4Q9H169 189 aaPredicted RBP18.27■□□□□ 0.52
CACNA1A-258ENST00000638029 LZTFL1Q9NQ48 299 aa18.27■□□□□ 0.52
CACNA1A-258ENST00000638029 CTAGE6Q86UF2 777 aa18.27■□□□□ 0.52
CACNA1A-258ENST00000638029 SLC4A1P02730 911 aa18.27■□□□□ 0.51
CACNA1A-258ENST00000638029 NXNQ6DKJ4 435 aa18.27■□□□□ 0.51
CACNA1A-258ENST00000638029 TOM1O60784 492 aa18.27■□□□□ 0.51
CACNA1A-258ENST00000638029 TACC1O75410 805 aa18.27■□□□□ 0.51
CACNA1A-258ENST00000638029 ANXA1P04083 346 aa18.27■□□□□ 0.51
CACNA1A-258ENST00000638029 CEBPAP49715 358 aaPredicted RBP18.27■□□□□ 0.51
CACNA1A-258ENST00000638029 GANCQ8TET4 914 aa18.27■□□□□ 0.51
CACNA1A-258ENST00000638029 PLEKHA4Q9H4M7 779 aa18.27■□□□□ 0.51
CACNA1A-258ENST00000638029 DNAI1Q9UI46 699 aa18.27■□□□□ 0.51
CACNA1A-258ENST00000638029 SAT1P21673 171 aa18.26■□□□□ 0.51
CACNA1A-258ENST00000638029 CYLC1P35663 651 aaPredicted RBP18.26■□□□□ 0.51
CACNA1A-258ENST00000638029 CDCA7Q9BWT1 371 aaPredicted RBP18.26■□□□□ 0.51
CACNA1A-258ENST00000638029 ALDH3A1P30838 453 aa18.26■□□□□ 0.51
CACNA1A-258ENST00000638029 PPP2R5AQ15172 486 aa18.26■□□□□ 0.51
CACNA1A-258ENST00000638029 Q3C1V9 767 aa18.26■□□□□ 0.51
CACNA1A-258ENST00000638029 SPC25Q9HBM1 224 aa18.26■□□□□ 0.51
CACNA1A-258ENST00000638029 CLNS1AP54105 237 aaKnown RBP18.26■□□□□ 0.51
CACNA1A-258ENST00000638029 HP1BP3Q5SSJ5 553 aaPredicted RBP18.26■□□□□ 0.51
CACNA1A-258ENST00000638029 JAKMIP2Q96AA8 810 aa18.26■□□□□ 0.51
CACNA1A-258ENST00000638029 ZKSCAN3Q9BRR0 538 aa18.26■□□□□ 0.51
CACNA1A-258ENST00000638029 XAB2Q9HCS7 855 aaKnown RBP18.26■□□□□ 0.51
CACNA1A-258ENST00000638029 SLC9A5Q14940 896 aa18.25■□□□□ 0.51
CACNA1A-258ENST00000638029 HELBQ8NG08 1087 aaPredicted RBP18.25■□□□□ 0.51
CACNA1A-258ENST00000638029 AMOTL2Q9Y2J4 779 aa18.25■□□□□ 0.51
CACNA1A-258ENST00000638029 EBAG9O00559 213 aa18.25■□□□□ 0.51
CACNA1A-258ENST00000638029 STK10O94804 968 aaKnown RBP18.25■□□□□ 0.51
CACNA1A-258ENST00000638029 CLUL1Q15846 466 aa18.25■□□□□ 0.51
CACNA1A-258ENST00000638029 ABCC11Q96J66 1382 aa18.25■□□□□ 0.51
CACNA1A-258ENST00000638029 RARSP54136 660 aaKnown RBP18.25■□□□□ 0.51
CACNA1A-258ENST00000638029 PHF8Q9UPP1 1060 aa18.25■□□□□ 0.51
CACNA1A-258ENST00000638029 A0A1B0GUL7 405 aa18.25■□□□□ 0.51
CACNA1A-258ENST00000638029 GADL1Q6ZQY3 521 aa18.25■□□□□ 0.51
CACNA1A-258ENST00000638029 HMG20BQ9P0W2 317 aa18.25■□□□□ 0.51
CACNA1A-258ENST00000638029 ATICP31939 592 aa18.25■□□□□ 0.51
CACNA1A-258ENST00000638029 TRAF1Q13077 416 aa18.25■□□□□ 0.51
CACNA1A-258ENST00000638029 ECHDC1Q9NTX5 307 aa18.25■□□□□ 0.51
CACNA1A-258ENST00000638029 SAMD15Q9P1V8 674 aa18.25■□□□□ 0.51
CACNA1A-258ENST00000638029 OPA1O60313 960 aa18.25■□□□□ 0.51
CACNA1A-258ENST00000638029 RXRAP19793 462 aa18.25■□□□□ 0.51
CACNA1A-258ENST00000638029 IFNL2Q8IZJ0 200 aa18.25■□□□□ 0.51
CACNA1A-258ENST00000638029 ZSCAN16Q9H4T2 348 aaPredicted RBP18.25■□□□□ 0.51
CACNA1A-258ENST00000638029 UBE2HP62256 183 aa18.24■□□□□ 0.51
CACNA1A-258ENST00000638029 NEK11Q8NG66 645 aa18.24■□□□□ 0.51
CACNA1A-258ENST00000638029 ZBTB43O43298 467 aa18.24■□□□□ 0.51
CACNA1A-258ENST00000638029 POMGNT1Q8WZA1 660 aa18.24■□□□□ 0.51
CACNA1A-258ENST00000638029 METTL14Q9HCE5 456 aaKnown RBP18.24■□□□□ 0.51
CACNA1A-258ENST00000638029 MGARPQ8TDB4 240 aa18.24■□□□□ 0.51
CACNA1A-258ENST00000638029 TTC14Q96N46 770 aa18.24■□□□□ 0.51
CACNA1A-258ENST00000638029 CTAGE1Q96RT6 745 aa18.24■□□□□ 0.51
CACNA1A-258ENST00000638029 CARD10Q9BWT7 1032 aa18.24■□□□□ 0.51
CACNA1A-258ENST00000638029 ALG1Q9BT22 464 aa18.24■□□□□ 0.51
CACNA1A-258ENST00000638029 TRIM31Q9BZY9 425 aa18.24■□□□□ 0.51
CACNA1A-258ENST00000638029 ANLNQ9NQW6 1124 aa18.24■□□□□ 0.51
CACNA1A-258ENST00000638029 ARHGEF11O15085 1522 aa18.24■□□□□ 0.51
CACNA1A-258ENST00000638029 KRT33BQ14525 404 aa18.24■□□□□ 0.51
CACNA1A-258ENST00000638029 ZNF569Q5MCW4 686 aa18.24■□□□□ 0.51
CACNA1A-258ENST00000638029 ARHGAP27Q6ZUM4 889 aa18.24■□□□□ 0.51
CACNA1A-258ENST00000638029 TROQ12816 1431 aaPredicted RBP18.24■□□□□ 0.51
CACNA1A-258ENST00000638029 PRPF6O94906 941 aaKnown RBP18.24■□□□□ 0.51
CACNA1A-258ENST00000638029 ZNF165P49910 485 aa18.24■□□□□ 0.51
CACNA1A-258ENST00000638029 CTAGE15A4D2H0 777 aa18.23■□□□□ 0.51
CACNA1A-258ENST00000638029 CTAGE8P0CG41 777 aa18.23■□□□□ 0.51
CACNA1A-258ENST00000638029 CTAGE4Q8IX94 777 aa18.23■□□□□ 0.51
CACNA1A-258ENST00000638029 CDK13Q14004 1512 aaKnown RBP18.23■□□□□ 0.51
CACNA1A-258ENST00000638029 MGEA5O60502 916 aa18.23■□□□□ 0.51
CACNA1A-258ENST00000638029 PDE6AP16499 860 aa18.23■□□□□ 0.51
CACNA1A-258ENST00000638029 ANO6Q4KMQ2 910 aa18.23■□□□□ 0.51
CACNA1A-258ENST00000638029 HS2ST1Q7LGA3 356 aa18.23■□□□□ 0.51
CACNA1A-258ENST00000638029 ESR2Q92731 530 aa18.23■□□□□ 0.51
CACNA1A-258ENST00000638029 UQCRFS1P1P0C7P4 283 aa18.23■□□□□ 0.51
CACNA1A-258ENST00000638029 PRPHP41219 470 aa18.23■□□□□ 0.51
CACNA1A-258ENST00000638029 RILPQ96NA2 401 aa18.23■□□□□ 0.51
CACNA1A-258ENST00000638029 SUFUQ9UMX1 484 aa18.23■□□□□ 0.51
CACNA1A-258ENST00000638029 CCDC24Q8N4L8 307 aa18.22■□□□□ 0.51
CACNA1A-258ENST00000638029 IFT74Q96LB3 600 aa18.22■□□□□ 0.51
CACNA1A-258ENST00000638029 VCX3BQ9H321 246 aa18.22■□□□□ 0.51
CACNA1A-258ENST00000638029 SYNJ1O43426 1573 aa18.22■□□□□ 0.51
CACNA1A-258ENST00000638029 RPS6KA2Q15349 733 aa18.22■□□□□ 0.51
CACNA1A-258ENST00000638029 ERCC6LQ2NKX8 1250 aa18.22■□□□□ 0.51
CACNA1A-258ENST00000638029 SYNJ2BP-COX16A0A087WUM0 186 aa18.22■□□□□ 0.51
CACNA1A-258ENST00000638029 CCNT1O60563 726 aaKnown RBP18.22■□□□□ 0.51
CACNA1A-258ENST00000638029 TMTC2Q8N394 836 aa18.22■□□□□ 0.51
CACNA1A-258ENST00000638029 RBM46Q8TBY0 533 aaKnown RBP18.22■□□□□ 0.51
CACNA1A-258ENST00000638029 COX16Q9P0S2 106 aa18.22■□□□□ 0.51
CACNA1A-258ENST00000638029 LACTBP83111 547 aaPredicted RBP18.22■□□□□ 0.51
CACNA1A-258ENST00000638029 CNNM2Q9H8M5 875 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms