RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 DBNDD2Q9BQY9 259 aa21.88■■□□□ 1.09
PNKP-230ENST00000638016 AK9Q5TCS8 1911 aa21.88■■□□□ 1.09
PNKP-230ENST00000638016 MCAMP43121 646 aa21.87■■□□□ 1.09
PNKP-230ENST00000638016 VGLL4Q14135 290 aa21.87■■□□□ 1.09
PNKP-230ENST00000638016 TNNI3KQ59H18 835 aa21.87■■□□□ 1.09
PNKP-230ENST00000638016 GORABQ5T7V8 394 aa21.87■■□□□ 1.09
PNKP-230ENST00000638016 REM2Q8IYK8 340 aaPredicted RBP21.87■■□□□ 1.09
PNKP-230ENST00000638016 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.87■■□□□ 1.09
PNKP-230ENST00000638016 MCOLN1Q9GZU1 580 aa21.87■■□□□ 1.09
PNKP-230ENST00000638016 FAM198AQ9UFP1 575 aa21.87■■□□□ 1.09
PNKP-230ENST00000638016 RCAN3Q9UKA8 241 aa21.87■■□□□ 1.09
PNKP-230ENST00000638016 COG6Q9Y2V7 657 aa21.87■■□□□ 1.09
PNKP-230ENST00000638016 FPGT-TNNI3KV9GXZ4 949 aa21.87■■□□□ 1.09
PNKP-230ENST00000638016 ZBTB22O15209 634 aa21.86■■□□□ 1.09
PNKP-230ENST00000638016 ARID4AP29374 1257 aaPredicted RBP21.86■■□□□ 1.09
PNKP-230ENST00000638016 DGKZQ13574 1117 aa21.86■■□□□ 1.09
PNKP-230ENST00000638016 MIGA2Q7L4E1 593 aa21.86■■□□□ 1.09
PNKP-230ENST00000638016 FAM83AQ86UY5 434 aa21.86■■□□□ 1.09
PNKP-230ENST00000638016 DZIP1Q86YF9 867 aaKnown RBP21.86■■□□□ 1.09
PNKP-230ENST00000638016 ZFPM1Q8IX07 1006 aa21.86■■□□□ 1.09
PNKP-230ENST00000638016 USP40Q9NVE5 1235 aa21.86■■□□□ 1.09
PNKP-230ENST00000638016 TLR7Q9NYK1 1049 aaKnown RBP21.86■■□□□ 1.09
PNKP-230ENST00000638016 GAKO14976 1311 aa21.85■■□□□ 1.09
PNKP-230ENST00000638016 PDS5AQ29RF7 1337 aaKnown RBP21.85■■□□□ 1.09
PNKP-230ENST00000638016 IGF2BP3O00425 579 aaKnown RBP eCLIP21.85■■□□□ 1.09
PNKP-230ENST00000638016 SREBF2Q12772 1141 aa21.85■■□□□ 1.09
PNKP-230ENST00000638016 FKBP1CQ5VVH2 108 aa21.85■■□□□ 1.09
PNKP-230ENST00000638016 SPATA5Q8NB90 893 aa21.85■■□□□ 1.09
PNKP-230ENST00000638016 OPTNQ96CV9 577 aa21.85■■□□□ 1.09
PNKP-230ENST00000638016 SNRKQ9NRH2 765 aa21.85■■□□□ 1.09
PNKP-230ENST00000638016 MYO5AQ9Y4I1 1855 aaKnown RBP21.85■■□□□ 1.09
PNKP-230ENST00000638016 RPAP1Q9BWH6 1393 aaPredicted RBP21.85■■□□□ 1.09
PNKP-230ENST00000638016 ZBTB48P10074 688 aaPredicted RBP21.84■■□□□ 1.09
PNKP-230ENST00000638016 MECOMQ03112 1051 aa21.84■■□□□ 1.09
PNKP-230ENST00000638016 ZGPATQ8N5A5 531 aaKnown RBP21.84■■□□□ 1.09
PNKP-230ENST00000638016 EXOC6BQ9Y2D4 811 aa21.84■■□□□ 1.09
PNKP-230ENST00000638016 NOP58Q9Y2X3 529 aaKnown RBP21.84■■□□□ 1.09
PNKP-230ENST00000638016 MANSC4A6NHS7 340 aaPredicted RBP21.83■■□□□ 1.09
PNKP-230ENST00000638016 SLURP2P0DP57 97 aa21.83■■□□□ 1.09
PNKP-230ENST00000638016 MAP3K9P80192 1104 aa21.83■■□□□ 1.09
PNKP-230ENST00000638016 C20orf194Q5TEA3 1177 aa21.83■■□□□ 1.09
PNKP-230ENST00000638016 FAM151AQ8WW52 585 aa21.83■■□□□ 1.09
PNKP-230ENST00000638016 ZKSCAN4Q969J2 545 aaPredicted RBP21.83■■□□□ 1.09
PNKP-230ENST00000638016 WRNIP1Q96S55 665 aa21.83■■□□□ 1.09
PNKP-230ENST00000638016 RFX7Q2KHR2 1363 aa21.83■■□□□ 1.08
PNKP-230ENST00000638016 BTDP43251 543 aa21.82■■□□□ 1.08
PNKP-230ENST00000638016 ERICH6Q7L0X2 663 aa21.82■■□□□ 1.08
PNKP-230ENST00000638016 IFNL1Q8IU54 200 aa21.82■■□□□ 1.08
PNKP-230ENST00000638016 ZNF296Q8WUU4 475 aaPredicted RBP21.82■■□□□ 1.08
PNKP-230ENST00000638016 OTUD5Q96G74 571 aa21.82■■□□□ 1.08
PNKP-230ENST00000638016 PTPN18Q99952 460 aa21.82■■□□□ 1.08
PNKP-230ENST00000638016 CCDC8Q9H0W5 538 aaPredicted RBP21.82■■□□□ 1.08
PNKP-230ENST00000638016 GPR108Q9NPR9 543 aa21.82■■□□□ 1.08
PNKP-230ENST00000638016 DBNLQ9UJU6 430 aaKnown RBP21.82■■□□□ 1.08
PNKP-230ENST00000638016 SNCAIPQ9Y6H5 919 aa21.82■■□□□ 1.08
PNKP-230ENST00000638016 MROH7-TTC4A0A0A0MT08 1334 aa21.81■■□□□ 1.08
PNKP-230ENST00000638016 DOCK2Q92608 1830 aa21.81■■□□□ 1.08
PNKP-230ENST00000638016 UNCXA6NJT0 531 aa21.81■■□□□ 1.08
PNKP-230ENST00000638016 INPP5BP32019 993 aa21.81■■□□□ 1.08
PNKP-230ENST00000638016 RGS3P49796 1198 aa21.81■■□□□ 1.08
PNKP-230ENST00000638016 TTC39AQ5SRH9 613 aa21.81■■□□□ 1.08
PNKP-230ENST00000638016 EAF2Q96CJ1 260 aaPredicted RBP21.81■■□□□ 1.08
PNKP-230ENST00000638016 DDX4Q9NQI0 724 aaKnown RBP21.81■■□□□ 1.08
PNKP-230ENST00000638016 SH3BP5LQ7L8J4 393 aa21.8■■□□□ 1.08
PNKP-230ENST00000638016 SIRT2Q8IXJ6 389 aa21.8■■□□□ 1.08
PNKP-230ENST00000638016 NSUN4Q96CB9 384 aaKnown RBP21.8■■□□□ 1.08
PNKP-230ENST00000638016 MS4A4AQ96JQ5 239 aa21.8■■□□□ 1.08
PNKP-230ENST00000638016 RAI14Q9P0K7 980 aa21.8■■□□□ 1.08
PNKP-230ENST00000638016 CSADQ9Y600 493 aa21.8■■□□□ 1.08
PNKP-230ENST00000638016 GPR25O00155 361 aa21.79■■□□□ 1.08
PNKP-230ENST00000638016 WDHD1O75717 1129 aaPredicted RBP21.79■■□□□ 1.08
PNKP-230ENST00000638016 UQCRFS1P1P0C7P4 283 aa21.79■■□□□ 1.08
PNKP-230ENST00000638016 PICALMQ13492 652 aa21.79■■□□□ 1.08
PNKP-230ENST00000638016 SPTY2D1Q68D10 685 aaPredicted RBP21.79■■□□□ 1.08
PNKP-230ENST00000638016 ATRNL1Q5VV63 1379 aa21.78■■□□□ 1.08
PNKP-230ENST00000638016 CCDC85CA6NKD9 419 aa21.78■■□□□ 1.08
PNKP-230ENST00000638016 RHBDL3P58872 404 aa21.78■■□□□ 1.08
PNKP-230ENST00000638016 BRI3BPQ8WY22 251 aa21.78■■□□□ 1.08
PNKP-230ENST00000638016 FAM163AQ96GL9 167 aaPredicted RBP21.78■■□□□ 1.08
PNKP-230ENST00000638016 ZNF341Q9BYN7 854 aa21.78■■□□□ 1.08
PNKP-230ENST00000638016 IL1RAPL2Q9NP60 686 aa21.78■■□□□ 1.08
PNKP-230ENST00000638016 ZBTB40Q9NUA8 1239 aa21.78■■□□□ 1.08
PNKP-230ENST00000638016 NDUFB9Q9Y6M9 179 aa21.78■■□□□ 1.08
PNKP-230ENST00000638016 MAST2Q6P0Q8 1798 aa21.78■■□□□ 1.08
PNKP-230ENST00000638016 GPR75-ASB3A0A0A6YYF3 556 aa21.77■■□□□ 1.08
PNKP-230ENST00000638016 DDTLA6NHG4 134 aaPredicted RBP21.77■■□□□ 1.08
PNKP-230ENST00000638016 SPDYE5A6NIY4 337 aa21.77■■□□□ 1.08
PNKP-230ENST00000638016 APBB1O00213 710 aa21.77■■□□□ 1.08
PNKP-230ENST00000638016 ZAP70P43403 619 aa21.77■■□□□ 1.08
PNKP-230ENST00000638016 DCAF15Q66K64 600 aa21.77■■□□□ 1.08
PNKP-230ENST00000638016 IDI2Q9BXS1 227 aa21.77■■□□□ 1.08
PNKP-230ENST00000638016 DDX19BQ9UMR2 479 aa21.77■■□□□ 1.08
PNKP-230ENST00000638016 CYP2E1P05181 493 aaPredicted RBP21.76■■□□□ 1.07
PNKP-230ENST00000638016 MS4A1P11836 297 aa21.76■■□□□ 1.07
PNKP-230ENST00000638016 CCDC158Q5M9N0 1113 aa21.76■■□□□ 1.07
PNKP-230ENST00000638016 CTU1Q7Z7A3 348 aaKnown RBP21.76■■□□□ 1.07
PNKP-230ENST00000638016 CFHR5Q9BXR6 569 aa21.76■■□□□ 1.07
PNKP-230ENST00000638016 PIH1D3Q9NQM4 214 aaKnown RBP21.76■■□□□ 1.07
PNKP-230ENST00000638016 LRP2BPQ9P2M1 347 aa21.76■■□□□ 1.07
PNKP-230ENST00000638016 CCL15-CCL14A0A0B4J2E2 113 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms