RNA–Protein interactions for RNA: ENST00000632629.1

NPHP3-ACAD11-202, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2

Gene NPHP3-ACAD11, Length 695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-202ENST00000632629 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.67□□□□□ -1.5
NPHP3-ACAD11-202ENST00000632629 ABL1P00519 1130 aa5.66□□□□□ -1.5
NPHP3-ACAD11-202ENST00000632629 ZSCAN22P10073 491 aaPredicted RBP5.66□□□□□ -1.5
NPHP3-ACAD11-202ENST00000632629 TXNDC2Q86VQ3 553 aa5.66□□□□□ -1.5
NPHP3-ACAD11-202ENST00000632629 C1orf127Q8N9H9 656 aa5.66□□□□□ -1.5
NPHP3-ACAD11-202ENST00000632629 BHLHE41Q9C0J9 482 aaPredicted RBP5.66□□□□□ -1.5
NPHP3-ACAD11-202ENST00000632629 SEMA6CQ9H3T2 930 aa5.66□□□□□ -1.5
NPHP3-ACAD11-202ENST00000632629 LMCD1Q9NZU5 365 aa5.66□□□□□ -1.5
NPHP3-ACAD11-202ENST00000632629 CNTN3Q9P232 1028 aa5.66□□□□□ -1.5
NPHP3-ACAD11-202ENST00000632629 ACTL7BQ9Y614 415 aa5.66□□□□□ -1.5
NPHP3-ACAD11-202ENST00000632629 TSPAN15O95858 294 aa5.65□□□□□ -1.5
NPHP3-ACAD11-202ENST00000632629 RAB6AP20340 208 aa5.65□□□□□ -1.5
NPHP3-ACAD11-202ENST00000632629 ECM1Q16610 540 aa5.65□□□□□ -1.5
NPHP3-ACAD11-202ENST00000632629 VN1R5Q7Z5H4 357 aa5.65□□□□□ -1.5
NPHP3-ACAD11-202ENST00000632629 PI4K2BQ8TCG2 481 aa5.65□□□□□ -1.5
NPHP3-ACAD11-202ENST00000632629 BSNDQ8WZ55 320 aa5.65□□□□□ -1.5
NPHP3-ACAD11-202ENST00000632629 FAM53CQ9NYF3 392 aa5.65□□□□□ -1.5
NPHP3-ACAD11-202ENST00000632629 RAPGEFL1Q9UHV5 662 aa5.65□□□□□ -1.5
NPHP3-ACAD11-202ENST00000632629 BRPF3Q9ULD4 1205 aa5.65□□□□□ -1.5
NPHP3-ACAD11-202ENST00000632629 GNEQ9Y223 722 aaKnown RBP5.65□□□□□ -1.5
NPHP3-ACAD11-202ENST00000632629 H3BRB1 525 aa5.64□□□□□ -1.51
NPHP3-ACAD11-202ENST00000632629 BRD1O95696 1058 aa5.64□□□□□ -1.51
NPHP3-ACAD11-202ENST00000632629 ADH5P11766 374 aa5.64□□□□□ -1.51
NPHP3-ACAD11-202ENST00000632629 ZNF211Q13398 564 aaPredicted RBP5.64□□□□□ -1.51
NPHP3-ACAD11-202ENST00000632629 MTMR3Q13615 1198 aa5.64□□□□□ -1.51
NPHP3-ACAD11-202ENST00000632629 MLANAQ16655 118 aa5.64□□□□□ -1.51
NPHP3-ACAD11-202ENST00000632629 OGFOD3Q6PK18 319 aa5.64□□□□□ -1.51
NPHP3-ACAD11-202ENST00000632629 RETREG2Q8NC44 543 aa5.64□□□□□ -1.51
NPHP3-ACAD11-202ENST00000632629 FAM129BQ96TA1 746 aa5.64□□□□□ -1.51
NPHP3-ACAD11-202ENST00000632629 DNAJC25Q9H1X3 360 aa5.64□□□□□ -1.51
NPHP3-ACAD11-202ENST00000632629 TUT1Q9H6E5 874 aaKnown RBP5.64□□□□□ -1.51
NPHP3-ACAD11-202ENST00000632629 C1GALT1Q9NS00 363 aa5.64□□□□□ -1.51
NPHP3-ACAD11-202ENST00000632629 JAG2Q9Y219 1238 aa5.64□□□□□ -1.51
NPHP3-ACAD11-202ENST00000632629 CD96P40200 585 aa5.63□□□□□ -1.51
NPHP3-ACAD11-202ENST00000632629 HP1BP3Q5SSJ5 553 aaPredicted RBP5.63□□□□□ -1.51
NPHP3-ACAD11-202ENST00000632629 ANKLE2Q86XL3 938 aa5.63□□□□□ -1.51
NPHP3-ACAD11-202ENST00000632629 GALNT12Q8IXK2 581 aa5.63□□□□□ -1.51
NPHP3-ACAD11-202ENST00000632629 PLD6Q8N2A8 252 aaKnown RBP5.63□□□□□ -1.51
NPHP3-ACAD11-202ENST00000632629 NXPE3Q969Y0 559 aa5.63□□□□□ -1.51
NPHP3-ACAD11-202ENST00000632629 ALKBH8Q96BT7 664 aaKnown RBP5.63□□□□□ -1.51
NPHP3-ACAD11-202ENST00000632629 DMRTB1Q96MA1 342 aa5.63□□□□□ -1.51
NPHP3-ACAD11-202ENST00000632629 OSMRQ99650 979 aa5.63□□□□□ -1.51
NPHP3-ACAD11-202ENST00000632629 ZFYVE1Q9HBF4 777 aa5.63□□□□□ -1.51
NPHP3-ACAD11-202ENST00000632629 ZFYVE28Q9HCC9 887 aa5.63□□□□□ -1.51
NPHP3-ACAD11-202ENST00000632629 ZNF503-AS2A6NEH8 195 aa5.62□□□□□ -1.51
NPHP3-ACAD11-202ENST00000632629 PATL2C9JE40 543 aaKnown RBP5.62□□□□□ -1.51
NPHP3-ACAD11-202ENST00000632629 EREGO14944 169 aa5.62□□□□□ -1.51
NPHP3-ACAD11-202ENST00000632629 DYNC1LI2O43237 492 aaPredicted RBP5.62□□□□□ -1.51
NPHP3-ACAD11-202ENST00000632629 ARHGAP4P98171 946 aa5.62□□□□□ -1.51
NPHP3-ACAD11-202ENST00000632629 SEZ6L2Q6UXD5 910 aa5.62□□□□□ -1.51
NPHP3-ACAD11-202ENST00000632629 ZSWIM9Q86XI8 627 aa5.62□□□□□ -1.51
NPHP3-ACAD11-202ENST00000632629 NETO1Q8TDF5 533 aa5.62□□□□□ -1.51
NPHP3-ACAD11-202ENST00000632629 PPP1R16BQ96T49 567 aa5.62□□□□□ -1.51
NPHP3-ACAD11-202ENST00000632629 ZKSCAN3Q9BRR0 538 aa5.62□□□□□ -1.51
NPHP3-ACAD11-202ENST00000632629 RBCK1Q9BYM8 510 aa5.62□□□□□ -1.51
NPHP3-ACAD11-202ENST00000632629 ACSS3Q9H6R3 686 aa5.62□□□□□ -1.51
NPHP3-ACAD11-202ENST00000632629 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.61□□□□□ -1.51
NPHP3-ACAD11-202ENST00000632629 SERPINB4P48594 390 aa5.61□□□□□ -1.51
NPHP3-ACAD11-202ENST00000632629 PTPN12Q05209 780 aaKnown RBP5.61□□□□□ -1.51
NPHP3-ACAD11-202ENST00000632629 CYP27C1Q4G0S4 372 aa5.61□□□□□ -1.51
NPHP3-ACAD11-202ENST00000632629 DYMQ7RTS9 669 aa5.61□□□□□ -1.51
NPHP3-ACAD11-202ENST00000632629 FAM105AQ9NUU6 356 aa5.61□□□□□ -1.51
NPHP3-ACAD11-202ENST00000632629 CCDC87Q9NVE4 849 aa5.61□□□□□ -1.51
NPHP3-ACAD11-202ENST00000632629 FOXD3Q9UJU5 478 aaPredicted RBP5.61□□□□□ -1.51
NPHP3-ACAD11-202ENST00000632629 VAV3Q9UKW4 847 aa5.61□□□□□ -1.51
NPHP3-ACAD11-202ENST00000632629 A6NHS1 94 aa5.6□□□□□ -1.51
NPHP3-ACAD11-202ENST00000632629 CPNE3O75131 537 aaKnown RBP5.6□□□□□ -1.51
NPHP3-ACAD11-202ENST00000632629 ESRRAP11474 423 aaPredicted RBP5.6□□□□□ -1.51
NPHP3-ACAD11-202ENST00000632629 HNRNPUQ00839 825 aaKnown RBP eCLIP5.6□□□□□ -1.51
NPHP3-ACAD11-202ENST00000632629 GSTM4Q03013 218 aa5.6□□□□□ -1.51
NPHP3-ACAD11-202ENST00000632629 PRKCQQ04759 706 aa5.6□□□□□ -1.51
NPHP3-ACAD11-202ENST00000632629 KIAA0319Q5VV43 1072 aa5.6□□□□□ -1.51
NPHP3-ACAD11-202ENST00000632629 FLAD1Q8NFF5 587 aa5.6□□□□□ -1.51
NPHP3-ACAD11-202ENST00000632629 DDX54Q8TDD1 881 aaKnown RBP5.6□□□□□ -1.51
NPHP3-ACAD11-202ENST00000632629 TIMELESSQ9UNS1 1208 aa5.6□□□□□ -1.51
NPHP3-ACAD11-202ENST00000632629 KCNMB1Q16558 191 aa5.59□□□□□ -1.51
NPHP3-ACAD11-202ENST00000632629 SYDE1Q6ZW31 735 aaPredicted RBP5.59□□□□□ -1.51
NPHP3-ACAD11-202ENST00000632629 CCNJLQ8IV13 435 aa5.59□□□□□ -1.51
NPHP3-ACAD11-202ENST00000632629 FAM181AQ8N9Y4 354 aa5.59□□□□□ -1.51
NPHP3-ACAD11-202ENST00000632629 ARID3AQ99856 593 aa5.59□□□□□ -1.51
NPHP3-ACAD11-202ENST00000632629 KRTAP9-8Q9BYQ0 159 aa5.59□□□□□ -1.51
NPHP3-ACAD11-202ENST00000632629 NRSN2Q9GZP1 204 aa5.59□□□□□ -1.51
NPHP3-ACAD11-202ENST00000632629 LGR6Q9HBX8 967 aa5.59□□□□□ -1.51
NPHP3-ACAD11-202ENST00000632629 CRIM1Q9NZV1 1036 aa5.59□□□□□ -1.51
NPHP3-ACAD11-202ENST00000632629 CARNS1A5YM72 827 aa5.58□□□□□ -1.52
NPHP3-ACAD11-202ENST00000632629 SUPT5HO00267 1087 aaKnown RBP5.58□□□□□ -1.52
NPHP3-ACAD11-202ENST00000632629 ASPAP45381 313 aa5.58□□□□□ -1.52
NPHP3-ACAD11-202ENST00000632629 AKAP4Q5JQC9 854 aa5.58□□□□□ -1.52
NPHP3-ACAD11-202ENST00000632629 PEAR1Q5VY43 1037 aaPredicted RBP5.58□□□□□ -1.52
NPHP3-ACAD11-202ENST00000632629 PRPF40BQ6NWY9 871 aaKnown RBP5.58□□□□□ -1.52
NPHP3-ACAD11-202ENST00000632629 LIN37Q96GY3 246 aaPredicted RBP5.58□□□□□ -1.52
NPHP3-ACAD11-202ENST00000632629 CLEC4MQ9H2X3 399 aaPredicted RBP5.58□□□□□ -1.52
NPHP3-ACAD11-202ENST00000632629 ANO2Q9NQ90 1003 aa5.58□□□□□ -1.52
NPHP3-ACAD11-202ENST00000632629 TRAK1Q9UPV9 953 aa5.58□□□□□ -1.52
NPHP3-ACAD11-202ENST00000632629 DAGLAQ9Y4D2 1042 aa5.58□□□□□ -1.52
NPHP3-ACAD11-202ENST00000632629 SOWAHDA6NJG2 315 aa5.57□□□□□ -1.52
NPHP3-ACAD11-202ENST00000632629 INHBBP09529 407 aa5.57□□□□□ -1.52
NPHP3-ACAD11-202ENST00000632629 CTSWP56202 376 aa5.57□□□□□ -1.52
NPHP3-ACAD11-202ENST00000632629 KCNA1Q09470 495 aa5.57□□□□□ -1.52
NPHP3-ACAD11-202ENST00000632629 AOC3Q16853 763 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 203.6 ms