RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 GTF3C6Q969F1 213 aa25.32■■□□□ 1.64
SPAST-204ENST00000621856 CRNKL1Q9BZJ0 848 aaKnown RBP25.32■■□□□ 1.64
SPAST-204ENST00000621856 BAG4O95429 457 aaKnown RBP25.32■■□□□ 1.64
SPAST-204ENST00000621856 CLEC17AQ6ZS10 378 aa25.32■■□□□ 1.64
SPAST-204ENST00000621856 CCDC125Q86Z20 511 aa25.32■■□□□ 1.64
SPAST-204ENST00000621856 FBXL16Q8N461 479 aa25.32■■□□□ 1.64
SPAST-204ENST00000621856 CNKSR1Q969H4 720 aa25.32■■□□□ 1.64
SPAST-204ENST00000621856 COA1Q9GZY4 146 aa25.32■■□□□ 1.64
SPAST-204ENST00000621856 NEDD4P46934 1319 aa25.31■■□□□ 1.64
SPAST-204ENST00000621856 WDR33Q9C0J8 1336 aaKnown RBP25.31■■□□□ 1.64
SPAST-204ENST00000621856 B4E1Z4 1266 aa25.31■■□□□ 1.64
SPAST-204ENST00000621856 ANTXR2P58335 489 aa25.31■■□□□ 1.64
SPAST-204ENST00000621856 AKNAD1Q5T1N1 836 aa25.31■■□□□ 1.64
SPAST-204ENST00000621856 CNNM2Q9H8M5 875 aa25.31■■□□□ 1.64
SPAST-204ENST00000621856 SLX4Q8IY92 1834 aa25.31■■□□□ 1.64
SPAST-204ENST00000621856 PFKFB2O60825 505 aa25.3■■□□□ 1.64
SPAST-204ENST00000621856 MFSD6Q6ZSS7 791 aa25.3■■□□□ 1.64
SPAST-204ENST00000621856 SLC16A10Q8TF71 515 aa25.3■■□□□ 1.64
SPAST-204ENST00000621856 TBC1D22AQ8WUA7 517 aa25.3■■□□□ 1.64
SPAST-204ENST00000621856 EYA3Q99504 573 aa25.3■■□□□ 1.64
SPAST-204ENST00000621856 BAZ2AQ9UIF9 1905 aaKnown RBP25.3■■□□□ 1.64
SPAST-204ENST00000621856 MINDY4BA8MYZ0 360 aa25.29■■□□□ 1.64
SPAST-204ENST00000621856 GOLGA6L22H0YM25 854 aa25.29■■□□□ 1.64
SPAST-204ENST00000621856 DTNBO60941 627 aa25.29■■□□□ 1.64
SPAST-204ENST00000621856 LDHCP07864 332 aa25.29■■□□□ 1.64
SPAST-204ENST00000621856 PPARAQ07869 468 aa25.29■■□□□ 1.64
SPAST-204ENST00000621856 GRIK5Q16478 980 aa25.29■■□□□ 1.64
SPAST-204ENST00000621856 NOL10Q9BSC4 688 aaKnown RBP25.29■■□□□ 1.64
SPAST-204ENST00000621856 KRT23Q9C075 422 aa25.29■■□□□ 1.64
SPAST-204ENST00000621856 GPHNQ9NQX3 736 aaPredicted RBP25.29■■□□□ 1.64
SPAST-204ENST00000621856 G3V3G9 751 aa25.29■■□□□ 1.64
SPAST-204ENST00000621856 DCAF8Q5TAQ9 597 aa25.29■■□□□ 1.64
SPAST-204ENST00000621856 GIMAP6Q6P9H5 292 aa25.29■■□□□ 1.64
SPAST-204ENST00000621856 CYB5R4Q7L1T6 521 aa25.29■■□□□ 1.64
SPAST-204ENST00000621856 STAG1Q8WVM7 1258 aa25.29■■□□□ 1.64
SPAST-204ENST00000621856 ZNF274Q96GC6 653 aaPredicted RBP25.29■■□□□ 1.64
SPAST-204ENST00000621856 ZNF219Q9P2Y4 722 aaPredicted RBP25.29■■□□□ 1.64
SPAST-204ENST00000621856 MYH2Q9UKX2 1941 aa25.29■■□□□ 1.64
SPAST-204ENST00000621856 SYT1P21579 422 aa25.28■■□□□ 1.64
SPAST-204ENST00000621856 MFSD14BQ5SR56 506 aa25.28■■□□□ 1.64
SPAST-204ENST00000621856 RNF41Q9H4P4 317 aaPredicted RBP25.28■■□□□ 1.64
SPAST-204ENST00000621856 INCENPQ9NQS7 918 aa25.28■■□□□ 1.64
SPAST-204ENST00000621856 TOMM22Q9NS69 142 aa25.28■■□□□ 1.64
SPAST-204ENST00000621856 FAM205AQ6ZU69 1335 aa25.28■■□□□ 1.64
SPAST-204ENST00000621856 STX6O43752 255 aa25.27■■□□□ 1.64
SPAST-204ENST00000621856 GTF2IP78347 998 aa25.27■■□□□ 1.64
SPAST-204ENST00000621856 SCRN1Q12765 414 aa25.27■■□□□ 1.64
SPAST-204ENST00000621856 DIXDC1Q155Q3 683 aa25.27■■□□□ 1.64
SPAST-204ENST00000621856 FBXW7Q969H0 707 aa25.27■■□□□ 1.64
SPAST-204ENST00000621856 C10orf71Q711Q0 1435 aa25.27■■□□□ 1.64
SPAST-204ENST00000621856 PTMSP20962 102 aa25.26■■□□□ 1.63
SPAST-204ENST00000621856 RRP12Q5JTH9 1297 aaKnown RBP25.26■■□□□ 1.63
SPAST-204ENST00000621856 STK11IPQ8N1F8 1099 aa25.26■■□□□ 1.63
SPAST-204ENST00000621856 ATP8A2Q9NTI2 1148 aa25.26■■□□□ 1.63
SPAST-204ENST00000621856 ANAPC4Q9UJX5 808 aa25.26■■□□□ 1.63
SPAST-204ENST00000621856 MROH7-TTC4A0A0A0MT08 1334 aa25.26■■□□□ 1.63
SPAST-204ENST00000621856 BAG3O95817 575 aa25.26■■□□□ 1.63
SPAST-204ENST00000621856 PDIA3P30101 505 aaKnown RBP25.26■■□□□ 1.63
SPAST-204ENST00000621856 CCT2P78371 535 aaKnown RBP25.26■■□□□ 1.63
SPAST-204ENST00000621856 DOK7Q18PE1 504 aa25.26■■□□□ 1.63
SPAST-204ENST00000621856 TACC3Q9Y6A5 838 aa25.26■■□□□ 1.63
SPAST-204ENST00000621856 KLF18A0A0U1RQI7 1052 aa25.25■■□□□ 1.63
SPAST-204ENST00000621856 EVCP57679 992 aa25.25■■□□□ 1.63
SPAST-204ENST00000621856 MCTP1Q6DN14 999 aa25.25■■□□□ 1.63
SPAST-204ENST00000621856 NKX2-3Q8TAU0 364 aa25.25■■□□□ 1.63
SPAST-204ENST00000621856 CHMP4CQ96CF2 233 aa25.25■■□□□ 1.63
SPAST-204ENST00000621856 TMEM87BQ96K49 555 aa25.25■■□□□ 1.63
SPAST-204ENST00000621856 KDM4AO75164 1064 aa25.24■■□□□ 1.63
SPAST-204ENST00000621856 ZSCAN22P10073 491 aaPredicted RBP25.24■■□□□ 1.63
SPAST-204ENST00000621856 LLPHQ9BRT6 129 aaKnown RBP25.24■■□□□ 1.63
SPAST-204ENST00000621856 ANGEL1Q9UNK9 670 aaKnown RBP25.24■■□□□ 1.63
SPAST-204ENST00000621856 LAMB1P07942 1786 aa25.24■■□□□ 1.63
SPAST-204ENST00000621856 SH2B2O14492 632 aaPredicted RBP25.23■■□□□ 1.63
SPAST-204ENST00000621856 PDCP20941 246 aa25.23■■□□□ 1.63
SPAST-204ENST00000621856 LARP1BQ659C4 914 aaKnown RBP25.23■■□□□ 1.63
SPAST-204ENST00000621856 CTR9Q6PD62 1173 aa25.23■■□□□ 1.63
SPAST-204ENST00000621856 SLF2Q8IX21 1173 aa25.23■■□□□ 1.63
SPAST-204ENST00000621856 DCP1AQ9NPI6 582 aaPredicted RBP25.23■■□□□ 1.63
SPAST-204ENST00000621856 DLEC1Q9Y238 1755 aa25.23■■□□□ 1.63
SPAST-204ENST00000621856 GOLGA8BA8MQT2 603 aa25.23■■□□□ 1.63
SPAST-204ENST00000621856 JAK2O60674 1132 aa25.23■■□□□ 1.63
SPAST-204ENST00000621856 USP5P45974 858 aa25.23■■□□□ 1.63
SPAST-204ENST00000621856 SH3RF3Q8TEJ3 882 aaPredicted RBP25.23■■□□□ 1.63
SPAST-204ENST00000621856 ZSWIM5Q9P217 1185 aa25.23■■□□□ 1.63
SPAST-204ENST00000621856 BRPF3Q9ULD4 1205 aa25.23■■□□□ 1.63
SPAST-204ENST00000621856 CYP2D7A0A087X1C5 515 aa25.22■■□□□ 1.63
SPAST-204ENST00000621856 USP17L12C9JPN9 530 aa25.22■■□□□ 1.63
SPAST-204ENST00000621856 USP17L21D6R901 530 aa25.22■■□□□ 1.63
SPAST-204ENST00000621856 PPP4CP60510 307 aa25.22■■□□□ 1.63
SPAST-204ENST00000621856 TMEM67Q5HYA8 995 aa25.22■■□□□ 1.63
SPAST-204ENST00000621856 NCOA5Q9HCD5 579 aaKnown RBP25.22■■□□□ 1.63
SPAST-204ENST00000621856 VPS37CA5D8V6 355 aaPredicted RBP25.21■■□□□ 1.63
SPAST-204ENST00000621856 PDIA4P13667 645 aaKnown RBP25.21■■□□□ 1.63
SPAST-204ENST00000621856 CERS3Q8IU89 383 aa25.21■■□□□ 1.63
SPAST-204ENST00000621856 RTFDC1Q9BY42 306 aaPredicted RBP25.21■■□□□ 1.63
SPAST-204ENST00000621856 ARPP21Q9UBL0 812 aaPredicted RBP25.21■■□□□ 1.63
SPAST-204ENST00000621856 IFIT3O14879 490 aaKnown RBP25.2■■□□□ 1.63
SPAST-204ENST00000621856 BTDP43251 543 aa25.2■■□□□ 1.63
SPAST-204ENST00000621856 CC2D2BQ6DHV5 1058 aa25.2■■□□□ 1.63
SPAST-204ENST00000621856 NSUN7Q8NE18 718 aaKnown RBP25.2■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms