RNA–Protein interactions for RNA: ENST00000621813.4

TRA2A-212, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRA2A, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-212ENST00000621813 VPS72Q15906 364 aa20.39■□□□□ 0.85
TRA2A-212ENST00000621813 MB21D2Q8IYB1 491 aaPredicted RBP20.39■□□□□ 0.85
TRA2A-212ENST00000621813 SPATA32Q96LK8 384 aa20.39■□□□□ 0.85
TRA2A-212ENST00000621813 CFAP45Q9UL16 551 aa20.39■□□□□ 0.85
TRA2A-212ENST00000621813 ZNF532Q9HCE3 1301 aa20.38■□□□□ 0.85
TRA2A-212ENST00000621813 GUCY2CP25092 1073 aa20.38■□□□□ 0.85
TRA2A-212ENST00000621813 MAP3K12Q12852 859 aa20.38■□□□□ 0.85
TRA2A-212ENST00000621813 TRDNQ13061 729 aa20.38■□□□□ 0.85
TRA2A-212ENST00000621813 DDX11Q96FC9 970 aa20.38■□□□□ 0.85
TRA2A-212ENST00000621813 CDC5LQ99459 802 aaKnown RBP20.38■□□□□ 0.85
TRA2A-212ENST00000621813 PAXBP1Q9Y5B6 917 aa20.38■□□□□ 0.85
TRA2A-212ENST00000621813 CASZ1Q86V15 1759 aa20.38■□□□□ 0.85
TRA2A-212ENST00000621813 GOLGA6L4A6NEF3 574 aa20.37■□□□□ 0.85
TRA2A-212ENST00000621813 CTDNEP1O95476 244 aa20.37■□□□□ 0.85
TRA2A-212ENST00000621813 HAND2P61296 217 aa20.37■□□□□ 0.85
TRA2A-212ENST00000621813 ATL3Q6DD88 541 aa20.37■□□□□ 0.85
TRA2A-212ENST00000621813 GOLGA6L1Q8N7Z2 621 aa20.37■□□□□ 0.85
TRA2A-212ENST00000621813 CNTNAP4Q9C0A0 1308 aa20.37■□□□□ 0.85
TRA2A-212ENST00000621813 A0A1B0GUL6 1792 aa20.37■□□□□ 0.85
TRA2A-212ENST00000621813 TCRBV5S4A2TA0A5A2 114 aa20.37■□□□□ 0.85
TRA2A-212ENST00000621813 PRC1O43663 620 aa20.37■□□□□ 0.85
TRA2A-212ENST00000621813 TXLNBQ8N3L3 684 aa20.37■□□□□ 0.85
TRA2A-212ENST00000621813 HELBQ8NG08 1087 aaPredicted RBP20.37■□□□□ 0.85
TRA2A-212ENST00000621813 LEO1Q8WVC0 666 aaPredicted RBP20.37■□□□□ 0.85
TRA2A-212ENST00000621813 SEC31BQ9NQW1 1179 aa20.37■□□□□ 0.85
TRA2A-212ENST00000621813 KCNQ2O43526 872 aa20.36■□□□□ 0.85
TRA2A-212ENST00000621813 CCDC172P0C7W6 258 aa20.36■□□□□ 0.85
TRA2A-212ENST00000621813 CASQ1P31415 396 aa20.36■□□□□ 0.85
TRA2A-212ENST00000621813 ALX1Q15699 326 aa20.36■□□□□ 0.85
TRA2A-212ENST00000621813 AIDAQ96BJ3 306 aa20.36■□□□□ 0.85
TRA2A-212ENST00000621813 CHD4Q14839 1912 aa20.36■□□□□ 0.85
TRA2A-212ENST00000621813 BCL9LQ86UU0 1499 aa20.36■□□□□ 0.85
TRA2A-212ENST00000621813 CCT2P78371 535 aaKnown RBP20.35■□□□□ 0.85
TRA2A-212ENST00000621813 FAM98CQ17RN3 349 aaKnown RBP20.35■□□□□ 0.85
TRA2A-212ENST00000621813 CHST3Q7LGC8 479 aa20.35■□□□□ 0.85
TRA2A-212ENST00000621813 RNF214Q8ND24 703 aa20.35■□□□□ 0.85
TRA2A-212ENST00000621813 NOL10Q9BSC4 688 aaKnown RBP20.35■□□□□ 0.85
TRA2A-212ENST00000621813 RASGRF1Q13972 1273 aa20.35■□□□□ 0.85
TRA2A-212ENST00000621813 FAM173BQ6P4H8 233 aa20.35■□□□□ 0.85
TRA2A-212ENST00000621813 CARMIL3Q8ND23 1372 aa20.34■□□□□ 0.85
TRA2A-212ENST00000621813 STRBPQ96SI9 672 aaKnown RBP20.34■□□□□ 0.85
TRA2A-212ENST00000621813 WWC3Q9ULE0 1092 aa20.34■□□□□ 0.85
TRA2A-212ENST00000621813 PATL2C9JE40 543 aaKnown RBP20.33■□□□□ 0.85
TRA2A-212ENST00000621813 LINC00116Q8NCU8 138 aa20.33■□□□□ 0.85
TRA2A-212ENST00000621813 NGLY1Q96IV0 654 aa20.33■□□□□ 0.85
TRA2A-212ENST00000621813 DDX19AQ9NUU7 478 aaKnown RBP20.33■□□□□ 0.85
TRA2A-212ENST00000621813 CWC15Q9P013 229 aaKnown RBP20.33■□□□□ 0.85
TRA2A-212ENST00000621813 NHSQ6T4R5 1651 aa20.33■□□□□ 0.84
TRA2A-212ENST00000621813 KIF1CO43896 1103 aaKnown RBP20.33■□□□□ 0.84
TRA2A-212ENST00000621813 CHRNDQ07001 517 aa20.33■□□□□ 0.84
TRA2A-212ENST00000621813 SF3B3Q15393 1217 aaKnown RBP20.33■□□□□ 0.84
TRA2A-212ENST00000621813 TEX35Q5T0J7 233 aa20.33■□□□□ 0.84
TRA2A-212ENST00000621813 FUCA2Q9BTY2 467 aa20.33■□□□□ 0.84
TRA2A-212ENST00000621813 TTC12Q9H892 705 aaPredicted RBP20.33■□□□□ 0.84
TRA2A-212ENST00000621813 NCOA5Q9HCD5 579 aaKnown RBP20.33■□□□□ 0.84
TRA2A-212ENST00000621813 TIAM2Q8IVF5 1701 aa20.32■□□□□ 0.84
TRA2A-212ENST00000621813 KLF18A0A0U1RQI7 1052 aa20.32■□□□□ 0.84
TRA2A-212ENST00000621813 GNAT2P19087 354 aa20.32■□□□□ 0.84
TRA2A-212ENST00000621813 ANTXR2P58335 489 aa20.32■□□□□ 0.84
TRA2A-212ENST00000621813 RC3H1Q5TC82 1133 aaKnown RBP20.32■□□□□ 0.84
TRA2A-212ENST00000621813 NUP62CLQ9H1M0 184 aa20.32■□□□□ 0.84
TRA2A-212ENST00000621813 TFIP11Q9UBB9 837 aaKnown RBP20.32■□□□□ 0.84
TRA2A-212ENST00000621813 BTAF1O14981 1849 aa20.32■□□□□ 0.84
TRA2A-212ENST00000621813 C4AP0C0L4 1744 aa20.32■□□□□ 0.84
TRA2A-212ENST00000621813 C4BP0C0L5 1744 aa20.32■□□□□ 0.84
TRA2A-212ENST00000621813 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.31■□□□□ 0.84
TRA2A-212ENST00000621813 CCDC192P0DO97 292 aa20.31■□□□□ 0.84
TRA2A-212ENST00000621813 SATB1Q01826 763 aa20.31■□□□□ 0.84
TRA2A-212ENST00000621813 MAGEB6Q8N7X4 407 aa20.31■□□□□ 0.84
TRA2A-212ENST00000621813 MNS1Q8NEH6 495 aa20.31■□□□□ 0.84
TRA2A-212ENST00000621813 ZBTB9Q96C00 473 aa20.31■□□□□ 0.84
TRA2A-212ENST00000621813 ZNF396Q96N95 335 aaPredicted RBP20.31■□□□□ 0.84
TRA2A-212ENST00000621813 C8orf37Q96NL8 207 aa20.31■□□□□ 0.84
TRA2A-212ENST00000621813 GOLGA8BA8MQT2 603 aa20.31■□□□□ 0.84
TRA2A-212ENST00000621813 TPRNQ4KMQ1 711 aa20.31■□□□□ 0.84
TRA2A-212ENST00000621813 ANKRD18AQ8IVF6 992 aa20.31■□□□□ 0.84
TRA2A-212ENST00000621813 FNBP4Q8N3X1 1017 aaPredicted RBP20.31■□□□□ 0.84
TRA2A-212ENST00000621813 TMEM87BQ96K49 555 aa20.31■□□□□ 0.84
TRA2A-212ENST00000621813 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.31■□□□□ 0.84
TRA2A-212ENST00000621813 ANGEL1Q9UNK9 670 aaKnown RBP20.31■□□□□ 0.84
TRA2A-212ENST00000621813 COL24A1Q17RW2 1714 aa20.31■□□□□ 0.84
TRA2A-212ENST00000621813 THSD7AQ9UPZ6 1657 aa20.3■□□□□ 0.84
TRA2A-212ENST00000621813 ADCY5O95622 1261 aa20.3■□□□□ 0.84
TRA2A-212ENST00000621813 MAP3K11Q16584 847 aa20.3■□□□□ 0.84
TRA2A-212ENST00000621813 NBPF20Q3BBV1 942 aa20.3■□□□□ 0.84
TRA2A-212ENST00000621813 GIMAP6Q6P9H5 292 aa20.3■□□□□ 0.84
TRA2A-212ENST00000621813 NBPF3Q9H094 633 aa20.3■□□□□ 0.84
TRA2A-212ENST00000621813 PNPLA7Q6ZV29 1317 aa20.3■□□□□ 0.84
TRA2A-212ENST00000621813 NYXQ9GZU5 481 aa20.29■□□□□ 0.84
TRA2A-212ENST00000621813 GNL3LQ9NVN8 582 aaKnown RBP20.29■□□□□ 0.84
TRA2A-212ENST00000621813 USP25Q9UHP3 1055 aa20.29■□□□□ 0.84
TRA2A-212ENST00000621813 CPLX1O14810 134 aa20.29■□□□□ 0.84
TRA2A-212ENST00000621813 UBE4AQ14139 1066 aa20.29■□□□□ 0.84
TRA2A-212ENST00000621813 BMS1Q14692 1282 aaKnown RBP20.29■□□□□ 0.84
TRA2A-212ENST00000621813 SLC10A5Q5PT55 438 aa20.29■□□□□ 0.84
TRA2A-212ENST00000621813 TBC1D10CQ8IV04 446 aa20.29■□□□□ 0.84
TRA2A-212ENST00000621813 NAPBQ9H115 298 aa20.29■□□□□ 0.84
TRA2A-212ENST00000621813 CNNM2Q9H8M5 875 aa20.29■□□□□ 0.84
TRA2A-212ENST00000621813 BSDC1Q9NW68 430 aaPredicted RBP20.29■□□□□ 0.84
TRA2A-212ENST00000621813 HPS5Q9UPZ3 1129 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms