RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 GJA5P36382 358 aa22.13■■□□□ 1.13
SCAMP4-213ENST00000621748 SREBF2Q12772 1141 aa22.13■■□□□ 1.13
SCAMP4-213ENST00000621748 TNNI3KQ59H18 835 aa22.13■■□□□ 1.13
SCAMP4-213ENST00000621748 PI16Q6UXB8 463 aa22.13■■□□□ 1.13
SCAMP4-213ENST00000621748 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.13■■□□□ 1.13
SCAMP4-213ENST00000621748 FPGT-TNNI3KV9GXZ4 949 aa22.13■■□□□ 1.13
SCAMP4-213ENST00000621748 TBC1D8O95759 1140 aa22.12■■□□□ 1.13
SCAMP4-213ENST00000621748 MS4A1P11836 297 aa22.12■■□□□ 1.13
SCAMP4-213ENST00000621748 ARID4AP29374 1257 aaPredicted RBP22.12■■□□□ 1.13
SCAMP4-213ENST00000621748 NFIAQ12857 509 aa22.12■■□□□ 1.13
SCAMP4-213ENST00000621748 SPATA5Q8NB90 893 aa22.12■■□□□ 1.13
SCAMP4-213ENST00000621748 ELP3Q9H9T3 547 aa22.12■■□□□ 1.13
SCAMP4-213ENST00000621748 USP40Q9NVE5 1235 aa22.12■■□□□ 1.13
SCAMP4-213ENST00000621748 AK9Q5TCS8 1911 aa22.12■■□□□ 1.13
SCAMP4-213ENST00000621748 MAP3K9P80192 1104 aa22.11■■□□□ 1.13
SCAMP4-213ENST00000621748 TCP10Q12799 353 aa22.11■■□□□ 1.13
SCAMP4-213ENST00000621748 SPTY2D1Q68D10 685 aaPredicted RBP22.11■■□□□ 1.13
SCAMP4-213ENST00000621748 TBC1D9Q6ZT07 1266 aa22.11■■□□□ 1.13
SCAMP4-213ENST00000621748 DZIP1Q86YF9 867 aaKnown RBP22.11■■□□□ 1.13
SCAMP4-213ENST00000621748 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.11■■□□□ 1.13
SCAMP4-213ENST00000621748 FAM151AQ8WW52 585 aa22.11■■□□□ 1.13
SCAMP4-213ENST00000621748 ABHD8Q96I13 439 aa22.11■■□□□ 1.13
SCAMP4-213ENST00000621748 GAKO14976 1311 aa22.1■■□□□ 1.13
SCAMP4-213ENST00000621748 LAMB1P07942 1786 aa22.1■■□□□ 1.13
SCAMP4-213ENST00000621748 MANSC4A6NHS7 340 aaPredicted RBP22.1■■□□□ 1.13
SCAMP4-213ENST00000621748 MCAMP43121 646 aa22.1■■□□□ 1.13
SCAMP4-213ENST00000621748 ZNF384Q8TF68 577 aa22.1■■□□□ 1.13
SCAMP4-213ENST00000621748 FAM163AQ96GL9 167 aaPredicted RBP22.1■■□□□ 1.13
SCAMP4-213ENST00000621748 DBNDD2Q9BQY9 259 aa22.1■■□□□ 1.13
SCAMP4-213ENST00000621748 MCOLN1Q9GZU1 580 aa22.1■■□□□ 1.13
SCAMP4-213ENST00000621748 FAM198AQ9UFP1 575 aa22.1■■□□□ 1.13
SCAMP4-213ENST00000621748 COG6Q9Y2V7 657 aa22.1■■□□□ 1.13
SCAMP4-213ENST00000621748 UQCRFS1P1P0C7P4 283 aa22.09■■□□□ 1.13
SCAMP4-213ENST00000621748 INHBEP58166 350 aa22.09■■□□□ 1.13
SCAMP4-213ENST00000621748 MECOMQ03112 1051 aa22.09■■□□□ 1.13
SCAMP4-213ENST00000621748 VGLL4Q14135 290 aa22.09■■□□□ 1.13
SCAMP4-213ENST00000621748 ERICH6Q7L0X2 663 aa22.09■■□□□ 1.13
SCAMP4-213ENST00000621748 ZFPM1Q8IX07 1006 aa22.09■■□□□ 1.13
SCAMP4-213ENST00000621748 CNKSR2Q8WXI2 1034 aa22.09■■□□□ 1.13
SCAMP4-213ENST00000621748 OPTNQ96CV9 577 aa22.09■■□□□ 1.13
SCAMP4-213ENST00000621748 RPAP1Q9BWH6 1393 aaPredicted RBP22.09■■□□□ 1.13
SCAMP4-213ENST00000621748 DGKZQ13574 1117 aa22.08■■□□□ 1.13
SCAMP4-213ENST00000621748 MIGA2Q7L4E1 593 aa22.08■■□□□ 1.13
SCAMP4-213ENST00000621748 IFNL1Q8IU54 200 aa22.08■■□□□ 1.13
SCAMP4-213ENST00000621748 R3HDMLQ9H3Y0 253 aa22.08■■□□□ 1.13
SCAMP4-213ENST00000621748 IGF2BP3O00425 579 aaKnown RBP eCLIP22.07■■□□□ 1.12
SCAMP4-213ENST00000621748 SLF2Q8IX21 1173 aa22.07■■□□□ 1.12
SCAMP4-213ENST00000621748 HOOK2Q96ED9 719 aa22.07■■□□□ 1.12
SCAMP4-213ENST00000621748 SNRKQ9NRH2 765 aa22.07■■□□□ 1.12
SCAMP4-213ENST00000621748 ZBTB40Q9NUA8 1239 aa22.07■■□□□ 1.12
SCAMP4-213ENST00000621748 EXOC6BQ9Y2D4 811 aa22.07■■□□□ 1.12
SCAMP4-213ENST00000621748 CSADQ9Y600 493 aa22.07■■□□□ 1.12
SCAMP4-213ENST00000621748 MROH7-TTC4A0A0A0MT08 1334 aa22.06■■□□□ 1.12
SCAMP4-213ENST00000621748 BTDP43251 543 aa22.06■■□□□ 1.12
SCAMP4-213ENST00000621748 CCDC158Q5M9N0 1113 aa22.06■■□□□ 1.12
SCAMP4-213ENST00000621748 TTC39AQ5SRH9 613 aa22.06■■□□□ 1.12
SCAMP4-213ENST00000621748 ZKSCAN4Q969J2 545 aaPredicted RBP22.06■■□□□ 1.12
SCAMP4-213ENST00000621748 NSUN4Q96CB9 384 aaKnown RBP22.06■■□□□ 1.12
SCAMP4-213ENST00000621748 EAF2Q96CJ1 260 aaPredicted RBP22.06■■□□□ 1.12
SCAMP4-213ENST00000621748 WRNIP1Q96S55 665 aa22.06■■□□□ 1.12
SCAMP4-213ENST00000621748 CFHR5Q9BXR6 569 aa22.06■■□□□ 1.12
SCAMP4-213ENST00000621748 IDI2Q9BXS1 227 aa22.06■■□□□ 1.12
SCAMP4-213ENST00000621748 CCDC8Q9H0W5 538 aaPredicted RBP22.06■■□□□ 1.12
SCAMP4-213ENST00000621748 TLR7Q9NYK1 1049 aaKnown RBP22.06■■□□□ 1.12
SCAMP4-213ENST00000621748 DBNLQ9UJU6 430 aaKnown RBP22.06■■□□□ 1.12
SCAMP4-213ENST00000621748 DDX19BQ9UMR2 479 aa22.06■■□□□ 1.12
SCAMP4-213ENST00000621748 GPR75-ASB3A0A0A6YYF3 556 aa22.05■■□□□ 1.12
SCAMP4-213ENST00000621748 RGS3P49796 1198 aa22.05■■□□□ 1.12
SCAMP4-213ENST00000621748 DCAF15Q66K64 600 aa22.05■■□□□ 1.12
SCAMP4-213ENST00000621748 ZNF296Q8WUU4 475 aaPredicted RBP22.05■■□□□ 1.12
SCAMP4-213ENST00000621748 MS4A4AQ96JQ5 239 aa22.05■■□□□ 1.12
SCAMP4-213ENST00000621748 ZNF341Q9BYN7 854 aa22.05■■□□□ 1.12
SCAMP4-213ENST00000621748 RAI14Q9P0K7 980 aa22.05■■□□□ 1.12
SCAMP4-213ENST00000621748 SNCAIPQ9Y6H5 919 aa22.05■■□□□ 1.12
SCAMP4-213ENST00000621748 TESPA1A2RU30 521 aaPredicted RBP22.04■■□□□ 1.12
SCAMP4-213ENST00000621748 GPR25O00155 361 aa22.04■■□□□ 1.12
SCAMP4-213ENST00000621748 WDHD1O75717 1129 aaPredicted RBP22.04■■□□□ 1.12
SCAMP4-213ENST00000621748 ALDH1A1P00352 501 aa22.04■■□□□ 1.12
SCAMP4-213ENST00000621748 C20orf194Q5TEA3 1177 aa22.04■■□□□ 1.12
SCAMP4-213ENST00000621748 SIRT2Q8IXJ6 389 aa22.04■■□□□ 1.12
SCAMP4-213ENST00000621748 PTPN18Q99952 460 aa22.04■■□□□ 1.12
SCAMP4-213ENST00000621748 RFX7Q2KHR2 1363 aa22.03■■□□□ 1.12
SCAMP4-213ENST00000621748 MYO5AQ9Y4I1 1855 aaKnown RBP22.03■■□□□ 1.12
SCAMP4-213ENST00000621748 ENTPD3O75355 529 aa22.03■■□□□ 1.12
SCAMP4-213ENST00000621748 INPP5BP32019 993 aa22.03■■□□□ 1.12
SCAMP4-213ENST00000621748 RHBDL3P58872 404 aa22.03■■□□□ 1.12
SCAMP4-213ENST00000621748 NOM1Q5C9Z4 860 aaKnown RBP22.03■■□□□ 1.12
SCAMP4-213ENST00000621748 SH3BP5LQ7L8J4 393 aa22.03■■□□□ 1.12
SCAMP4-213ENST00000621748 OTUD5Q96G74 571 aa22.03■■□□□ 1.12
SCAMP4-213ENST00000621748 ZNF512BQ96KM6 892 aaPredicted RBP22.03■■□□□ 1.12
SCAMP4-213ENST00000621748 DDX4Q9NQI0 724 aaKnown RBP22.03■■□□□ 1.12
SCAMP4-213ENST00000621748 LRP2BPQ9P2M1 347 aa22.03■■□□□ 1.12
SCAMP4-213ENST00000621748 SPDYE5A6NIY4 337 aa22.02■■□□□ 1.12
SCAMP4-213ENST00000621748 CYP2E1P05181 493 aaPredicted RBP22.02■■□□□ 1.12
SCAMP4-213ENST00000621748 LDHCP07864 332 aa22.02■■□□□ 1.12
SCAMP4-213ENST00000621748 GSTO1P78417 241 aa22.02■■□□□ 1.12
SCAMP4-213ENST00000621748 RPAP2Q8IXW5 612 aaPredicted RBP22.02■■□□□ 1.12
SCAMP4-213ENST00000621748 ZNF112Q9UJU3 913 aa22.02■■□□□ 1.12
SCAMP4-213ENST00000621748 CENPBP07199 599 aaPredicted RBP22.01■■□□□ 1.11
SCAMP4-213ENST00000621748 ZAP70P43403 619 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms