RNA–Protein interactions for RNA: ENST00000619178.1

SNORD3D-201, Transcript of small nucleolar RNA, C/D box 3D, humanhuman

BASIC

Gene SNORD3D, Length 218 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3D-201ENST00000619178 KCNQ5Q9NR82 932 aa13.2□□□□□ -0.3
SNORD3D-201ENST00000619178 ATP8A2Q9NTI2 1148 aa13.2□□□□□ -0.3
SNORD3D-201ENST00000619178 DDX60LQ5H9U9 1706 aaKnown RBP13.19□□□□□ -0.3
SNORD3D-201ENST00000619178 IQCA1LA6NCM1 817 aa13.19□□□□□ -0.3
SNORD3D-201ENST00000619178 BTDP43251 543 aa13.19□□□□□ -0.3
SNORD3D-201ENST00000619178 SCNN1DP51172 638 aa13.19□□□□□ -0.3
SNORD3D-201ENST00000619178 MTMR14Q8NCE2 650 aa13.19□□□□□ -0.3
SNORD3D-201ENST00000619178 IL27Q8NEV9 243 aa13.19□□□□□ -0.3
SNORD3D-201ENST00000619178 OSBP2Q969R2 916 aa13.19□□□□□ -0.3
SNORD3D-201ENST00000619178 PUS7LQ9H0K6 701 aaKnown RBP13.19□□□□□ -0.3
SNORD3D-201ENST00000619178 AATFQ9NY61 560 aaKnown RBP eCLIP13.19□□□□□ -0.36e-26■■■■■ 193.1
SNORD3D-201ENST00000619178 U3KPZ7 1027 aaPredicted RBP13.19□□□□□ -0.3
SNORD3D-201ENST00000619178 ZMYM6O95789 1325 aa13.18□□□□□ -0.3
SNORD3D-201ENST00000619178 ZNF541Q9H0D2 1346 aa13.18□□□□□ -0.3
SNORD3D-201ENST00000619178 GLTPD2A6NH11 291 aa13.18□□□□□ -0.3
SNORD3D-201ENST00000619178 PATL2C9JE40 543 aaKnown RBP13.18□□□□□ -0.3
SNORD3D-201ENST00000619178 USP5P45974 858 aa13.18□□□□□ -0.3
SNORD3D-201ENST00000619178 TNNI2P48788 182 aa13.18□□□□□ -0.3
SNORD3D-201ENST00000619178 GMPSP49915 693 aaPredicted RBP13.18□□□□□ -0.3
SNORD3D-201ENST00000619178 PRELPP51888 382 aa13.18□□□□□ -0.3
SNORD3D-201ENST00000619178 TNFAIP1Q13829 316 aa13.18□□□□□ -0.3
SNORD3D-201ENST00000619178 DIXDC1Q155Q3 683 aa13.18□□□□□ -0.3
SNORD3D-201ENST00000619178 CFAP100Q494V2 611 aa13.18□□□□□ -0.3
SNORD3D-201ENST00000619178 MIGA1Q8NAN2 632 aa13.18□□□□□ -0.3
SNORD3D-201ENST00000619178 STRBPQ96SI9 672 aaKnown RBP13.18□□□□□ -0.3
SNORD3D-201ENST00000619178 CNOT7Q9UIV1 285 aaKnown RBP13.18□□□□□ -0.3
SNORD3D-201ENST00000619178 DAGLAQ9Y4D2 1042 aa13.18□□□□□ -0.3
SNORD3D-201ENST00000619178 SLC4A4Q9Y6R1 1079 aa13.18□□□□□ -0.3
SNORD3D-201ENST00000619178 M0R2C6 588 aa13.17□□□□□ -0.3
SNORD3D-201ENST00000619178 SLC3A2P08195 630 aaKnown RBP13.17□□□□□ -0.3
SNORD3D-201ENST00000619178 ZKSCAN1P17029 563 aaPredicted RBP13.17□□□□□ -0.3
SNORD3D-201ENST00000619178 ZNF280AP59817 542 aaPredicted RBP13.17□□□□□ -0.3
SNORD3D-201ENST00000619178 MICALL2Q8IY33 904 aa13.17□□□□□ -0.3
SNORD3D-201ENST00000619178 TEX11Q8IYF3 940 aa13.17□□□□□ -0.3
SNORD3D-201ENST00000619178 RIOK1Q9BRS2 568 aaKnown RBP13.17□□□□□ -0.3
SNORD3D-201ENST00000619178 MXD3Q9BW11 206 aa13.17□□□□□ -0.3
SNORD3D-201ENST00000619178 NAPBQ9H115 298 aa13.17□□□□□ -0.3
SNORD3D-201ENST00000619178 ARMT1Q9H993 441 aa13.17□□□□□ -0.3
SNORD3D-201ENST00000619178 MYOZ2Q9NPC6 264 aa13.17□□□□□ -0.3
SNORD3D-201ENST00000619178 GPRC5DQ9NZD1 345 aa13.17□□□□□ -0.3
SNORD3D-201ENST00000619178 TAOK2Q9UL54 1235 aa13.17□□□□□ -0.3
SNORD3D-201ENST00000619178 ZBTB12Q9Y330 459 aaPredicted RBP13.17□□□□□ -0.3
SNORD3D-201ENST00000619178 ATAD5Q96QE3 1844 aa13.17□□□□□ -0.3
SNORD3D-201ENST00000619178 NPM3O75607 178 aaKnown RBP13.16□□□□□ -0.3
SNORD3D-201ENST00000619178 HSPD1P10809 573 aaKnown RBP13.16□□□□□ -0.3
SNORD3D-201ENST00000619178 TDO2P48775 406 aa13.16□□□□□ -0.3
SNORD3D-201ENST00000619178 ALX1Q15699 326 aa13.16□□□□□ -0.3
SNORD3D-201ENST00000619178 IMMTQ16891 758 aaKnown RBP13.16□□□□□ -0.3
SNORD3D-201ENST00000619178 FKBP1CQ5VVH2 108 aa13.16□□□□□ -0.3
SNORD3D-201ENST00000619178 MAP4K1Q92918 833 aa13.16□□□□□ -0.3
SNORD3D-201ENST00000619178 L3MBTL3Q96JM7 780 aaPredicted RBP13.16□□□□□ -0.3
SNORD3D-201ENST00000619178 SEC62Q99442 399 aaKnown RBP13.16□□□□□ -0.3
SNORD3D-201ENST00000619178 ZNF287Q9HBT7 754 aa13.16□□□□□ -0.3
SNORD3D-201ENST00000619178 ADARB2Q9NS39 739 aaKnown RBP13.16□□□□□ -0.3
SNORD3D-201ENST00000619178 USP40Q9NVE5 1235 aa13.16□□□□□ -0.3
SNORD3D-201ENST00000619178 ARPP21Q9UBL0 812 aaPredicted RBP13.16□□□□□ -0.3
SNORD3D-201ENST00000619178 SPDYE2BA6NHP3 402 aa13.15□□□□□ -0.3
SNORD3D-201ENST00000619178 SPDYE6P0CI01 402 aa13.15□□□□□ -0.3
SNORD3D-201ENST00000619178 NT5C2P49902 561 aa13.15□□□□□ -0.3
SNORD3D-201ENST00000619178 KRT32Q14532 448 aa13.15□□□□□ -0.3
SNORD3D-201ENST00000619178 GRIK5Q16478 980 aa13.15□□□□□ -0.3
SNORD3D-201ENST00000619178 ADGRA1Q86SQ6 560 aa13.15□□□□□ -0.3
SNORD3D-201ENST00000619178 ZNF589Q86UQ0 364 aaPredicted RBP13.15□□□□□ -0.3
SNORD3D-201ENST00000619178 LCORLQ8N3X6 602 aa13.15□□□□□ -0.3
SNORD3D-201ENST00000619178 ZNF384Q8TF68 577 aa13.15□□□□□ -0.3
SNORD3D-201ENST00000619178 HACL1Q9UJ83 578 aa13.15□□□□□ -0.3
SNORD3D-201ENST00000619178 COL2A1P02458 1487 aaPredicted RBP13.15□□□□□ -0.3
SNORD3D-201ENST00000619178 TRPM7Q96QT4 1865 aa13.14□□□□□ -0.31
SNORD3D-201ENST00000619178 MYH4Q9Y623 1939 aa13.14□□□□□ -0.31
SNORD3D-201ENST00000619178 ENTPD3O75355 529 aa13.14□□□□□ -0.31
SNORD3D-201ENST00000619178 DDNO94850 711 aaPredicted RBP13.14□□□□□ -0.31
SNORD3D-201ENST00000619178 PCP11498 1178 aaKnown RBP13.14□□□□□ -0.31
SNORD3D-201ENST00000619178 ANAPC15P60006 121 aa13.14□□□□□ -0.31
SNORD3D-201ENST00000619178 KIF4BQ2VIQ3 1234 aa13.14□□□□□ -0.31
SNORD3D-201ENST00000619178 CCDC129Q6ZRS4 1044 aa13.14□□□□□ -0.31
SNORD3D-201ENST00000619178 TTC6Q86TZ1 520 aa13.14□□□□□ -0.31
SNORD3D-201ENST00000619178 PNMA8AQ86V59 439 aaPredicted RBP13.14□□□□□ -0.31
SNORD3D-201ENST00000619178 APOBEC3FQ8IUX4 373 aaKnown RBP13.14□□□□□ -0.31
SNORD3D-201ENST00000619178 IFNL3Q8IZI9 196 aa13.14□□□□□ -0.31
SNORD3D-201ENST00000619178 HOOK2Q96ED9 719 aa13.14□□□□□ -0.31
SNORD3D-201ENST00000619178 USP26Q9BXU7 913 aa13.14□□□□□ -0.31
SNORD3D-201ENST00000619178 LSG1Q9H089 658 aaKnown RBP13.14□□□□□ -0.31
SNORD3D-201ENST00000619178 DHX36Q9H2U1 1008 aaKnown RBP13.14□□□□□ -0.31
SNORD3D-201ENST00000619178 ZNF213O14771 459 aa13.13□□□□□ -0.31
SNORD3D-201ENST00000619178 HLA-DOAP06340 250 aa13.13□□□□□ -0.31
SNORD3D-201ENST00000619178 DYNLL1P63167 89 aaKnown RBP13.13□□□□□ -0.31
SNORD3D-201ENST00000619178 TRDNQ13061 729 aa13.13□□□□□ -0.31
SNORD3D-201ENST00000619178 APOBEC3HQ6NTF7 200 aaKnown RBP13.13□□□□□ -0.31
SNORD3D-201ENST00000619178 CDC42EP5Q6NZY7 148 aa13.13□□□□□ -0.31
SNORD3D-201ENST00000619178 USP50Q70EL3 339 aaPredicted RBP13.13□□□□□ -0.31
SNORD3D-201ENST00000619178 SH3RF3Q8TEJ3 882 aaPredicted RBP13.13□□□□□ -0.31
SNORD3D-201ENST00000619178 IDI2Q9BXS1 227 aa13.13□□□□□ -0.31
SNORD3D-201ENST00000619178 C22orf23Q9BZE7 217 aa13.13□□□□□ -0.31
SNORD3D-201ENST00000619178 RNF41Q9H4P4 317 aaPredicted RBP13.13□□□□□ -0.31
SNORD3D-201ENST00000619178 RBM8AQ9Y5S9 174 aaKnown RBP13.13□□□□□ -0.31
SNORD3D-201ENST00000619178 PITPNM2Q9BZ72 1349 aa13.13□□□□□ -0.31
SNORD3D-201ENST00000619178 GSG1L2A8MUP6 293 aa13.12□□□□□ -0.31
SNORD3D-201ENST00000619178 WNT10BO00744 389 aa13.12□□□□□ -0.31
SNORD3D-201ENST00000619178 POLR3DP05423 398 aaPredicted RBP13.12□□□□□ -0.31
SNORD3D-201ENST00000619178 PSMA5P28066 241 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms