RNA–Protein interactions for RNA: ENST00000617585.1

ARHGEF1-223, Transcript of Rho guanine nucleotide exchange factor 1, human

TSL 2

Gene ARHGEF1, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF1-223	ENST00000617585	GAK	O14976	1311 aa		27.61	■■■□□ 2.01
ARHGEF1-223	ENST00000617585	ARID4A	P29374	1257 aa	Predicted RBP	27.6	■■■□□ 2.01
ARHGEF1-223	ENST00000617585	GJA5	P36382	358 aa		27.6	■■■□□ 2.01
ARHGEF1-223	ENST00000617585	FAM151A	Q8WW52	585 aa		27.6	■■■□□ 2.01
ARHGEF1-223	ENST00000617585	NEUROD6	Q96NK8	337 aa		27.6	■■■□□ 2.01
ARHGEF1-223	ENST00000617585	MCOLN1	Q9GZU1	580 aa		27.6	■■■□□ 2.01
ARHGEF1-223	ENST00000617585	ALDH1A1	P00352	501 aa		27.59	■■■□□ 2.01
ARHGEF1-223	ENST00000617585	MS4A1	P11836	297 aa		27.59	■■■□□ 2.01
ARHGEF1-223	ENST00000617585	MAP3K9	P80192	1104 aa		27.59	■■■□□ 2.01
ARHGEF1-223	ENST00000617585	TESPA1	A2RU30	521 aa	Predicted RBP	27.58	■■■□□ 2.01
ARHGEF1-223	ENST00000617585	SPTY2D1	Q68D10	685 aa	Predicted RBP	27.58	■■■□□ 2.01
ARHGEF1-223	ENST00000617585	C1orf115	Q9H7X2	142 aa		27.58	■■■□□ 2.01
ARHGEF1-223	ENST00000617585	HMG20B	Q9P0W2	317 aa		27.58	■■■□□ 2.01
ARHGEF1-223	ENST00000617585	AK9	Q5TCS8	1911 aa		27.57	■■■□□ 2
ARHGEF1-223	ENST00000617585	IFNL1	Q8IU54	200 aa		27.57	■■■□□ 2
ARHGEF1-223	ENST00000617585	TBC1D8	O95759	1140 aa		27.56	■■■□□ 2
ARHGEF1-223	ENST00000617585	DGKZ	Q13574	1117 aa		27.56	■■■□□ 2
ARHGEF1-223	ENST00000617585	VGLL4	Q14135	290 aa		27.56	■■■□□ 2
ARHGEF1-223	ENST00000617585	SLF2	Q8IX21	1173 aa		27.56	■■■□□ 2
ARHGEF1-223	ENST00000617585	PANK1	Q8TE04	598 aa		27.56	■■■□□ 2
ARHGEF1-223	ENST00000617585	USP40	Q9NVE5	1235 aa		27.56	■■■□□ 2
ARHGEF1-223	ENST00000617585	FAM198A	Q9UFP1	575 aa		27.56	■■■□□ 2
ARHGEF1-223	ENST00000617585	SURF6	O75683	361 aa	Known RBP	27.55	■■■□□ 2
ARHGEF1-223	ENST00000617585	UQCRFS1P1	P0C7P4	283 aa		27.55	■■■□□ 2
ARHGEF1-223	ENST00000617585	TNNI3K	Q59H18	835 aa		27.55	■■■□□ 2
ARHGEF1-223	ENST00000617585	CEP85	Q6P2H3	762 aa		27.55	■■■□□ 2
ARHGEF1-223	ENST00000617585	SPATA5	Q8NB90	893 aa		27.55	■■■□□ 2
ARHGEF1-223	ENST00000617585	OPTN	Q96CV9	577 aa		27.55	■■■□□ 2
ARHGEF1-223	ENST00000617585	IDI2	Q9BXS1	227 aa		27.55	■■■□□ 2
ARHGEF1-223	ENST00000617585	ELP3	Q9H9T3	547 aa		27.55	■■■□□ 2
ARHGEF1-223	ENST00000617585	ABCF2	Q9UG63	623 aa		27.55	■■■□□ 2
ARHGEF1-223	ENST00000617585	FPGT-TNNI3K	V9GXZ4	949 aa		27.55	■■■□□ 2
ARHGEF1-223	ENST00000617585	RFX7	Q2KHR2	1363 aa		27.55	■■■□□ 2
ARHGEF1-223	ENST00000617585	GPR25	O00155	361 aa		27.54	■■■□□ 2
ARHGEF1-223	ENST00000617585	NFIA	Q12857	509 aa		27.54	■■■□□ 2
ARHGEF1-223	ENST00000617585	GORAB	Q5T7V8	394 aa		27.54	■■■□□ 2
ARHGEF1-223	ENST00000617585	DCAF15	Q66K64	600 aa		27.54	■■■□□ 2
ARHGEF1-223	ENST00000617585	DZIP1	Q86YF9	867 aa	Known RBP	27.54	■■■□□ 2
ARHGEF1-223	ENST00000617585	MS4A4A	Q96JQ5	239 aa		27.54	■■■□□ 2
ARHGEF1-223	ENST00000617585	CSAD	Q9Y600	493 aa		27.54	■■■□□ 2
ARHGEF1-223	ENST00000617585	IGF2BP3	O00425	579 aa	Known RBP eCLIP	27.53	■■■□□ 2
ARHGEF1-223	ENST00000617585	MCAM	P43121	646 aa		27.53	■■■□□ 2
ARHGEF1-223	ENST00000617585	ERICH6	Q7L0X2	663 aa		27.53	■■■□□ 2
ARHGEF1-223	ENST00000617585	ZNF384	Q8TF68	577 aa		27.53	■■■□□ 2
ARHGEF1-223	ENST00000617585	ZNF296	Q8WUU4	475 aa	Predicted RBP	27.53	■■■□□ 2
ARHGEF1-223	ENST00000617585	CTU1	Q7Z7A3	348 aa	Known RBP	27.52	■■■□□ 2
ARHGEF1-223	ENST00000617585	ZNF512B	Q96KM6	892 aa	Predicted RBP	27.52	■■■□□ 2
ARHGEF1-223	ENST00000617585	ZNF112	Q9UJU3	913 aa		27.52	■■■□□ 2
ARHGEF1-223	ENST00000617585	SNCAIP	Q9Y6H5	919 aa		27.52	■■■□□ 2
ARHGEF1-223	ENST00000617585	DOCK2	Q92608	1830 aa		27.52	■■■□□ 2
ARHGEF1-223	ENST00000617585	MROH7-TTC4	A0A0A0MT08	1334 aa		27.51	■■□□□ 1.99
ARHGEF1-223	ENST00000617585	GPR75-ASB3	A0A0A6YYF3	556 aa		27.51	■■□□□ 1.99
ARHGEF1-223	ENST00000617585	SPDYE5	A6NIY4	337 aa		27.51	■■□□□ 1.99
ARHGEF1-223	ENST00000617585	ENTPD3	O75355	529 aa		27.51	■■□□□ 1.99
ARHGEF1-223	ENST00000617585	MECOM	Q03112	1051 aa		27.51	■■□□□ 1.99
ARHGEF1-223	ENST00000617585	PI16	Q6UXB8	463 aa		27.51	■■□□□ 1.99
ARHGEF1-223	ENST00000617585	ZNF341	Q9BYN7	854 aa		27.51	■■□□□ 1.99
ARHGEF1-223	ENST00000617585	R3HDML	Q9H3Y0	253 aa		27.51	■■□□□ 1.99
ARHGEF1-223	ENST00000617585	TCP10	Q12799	353 aa		27.5	■■□□□ 1.99
ARHGEF1-223	ENST00000617585	OS9	Q13438	667 aa	Predicted RBP	27.5	■■□□□ 1.99
ARHGEF1-223	ENST00000617585	OTUD7B	Q6GQQ9	843 aa		27.5	■■□□□ 1.99
ARHGEF1-223	ENST00000617585	NSUN4	Q96CB9	384 aa	Known RBP	27.5	■■□□□ 1.99
ARHGEF1-223	ENST00000617585	WRNIP1	Q96S55	665 aa		27.5	■■□□□ 1.99
ARHGEF1-223	ENST00000617585	PTPN18	Q99952	460 aa		27.5	■■□□□ 1.99
ARHGEF1-223	ENST00000617585	DBNDD2	Q9BQY9	259 aa		27.5	■■□□□ 1.99
ARHGEF1-223	ENST00000617585	RCAN3	Q9UKA8	241 aa		27.5	■■□□□ 1.99
ARHGEF1-223	ENST00000617585	IGSF3	O75054	1194 aa		27.49	■■□□□ 1.99
ARHGEF1-223	ENST00000617585	NPM3	O75607	178 aa	Known RBP	27.49	■■□□□ 1.99
ARHGEF1-223	ENST00000617585	MAP4K4	O95819	1239 aa	Predicted RBP	27.49	■■□□□ 1.99
ARHGEF1-223	ENST00000617585	CNKSR2	Q8WXI2	1034 aa		27.49	■■□□□ 1.99
ARHGEF1-223	ENST00000617585	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	27.49	■■□□□ 1.99
ARHGEF1-223	ENST00000617585	ATRNL1	Q5VV63	1379 aa		27.48	■■□□□ 1.99
ARHGEF1-223	ENST00000617585	WDHD1	O75717	1129 aa	Predicted RBP	27.48	■■□□□ 1.99
ARHGEF1-223	ENST00000617585	GTF2A2	P52657	109 aa		27.48	■■□□□ 1.99
ARHGEF1-223	ENST00000617585	MAP3K10	Q02779	954 aa		27.48	■■□□□ 1.99
ARHGEF1-223	ENST00000617585	CCDC158	Q5M9N0	1113 aa		27.48	■■□□□ 1.99
ARHGEF1-223	ENST00000617585	ERO1B	Q86YB8	467 aa		27.48	■■□□□ 1.99
ARHGEF1-223	ENST00000617585	DDX19B	Q9UMR2	479 aa		27.48	■■□□□ 1.99
ARHGEF1-223	ENST00000617585	MYO5A	Q9Y4I1	1855 aa	Known RBP	27.48	■■□□□ 1.99
ARHGEF1-223	ENST00000617585	MAST2	Q6P0Q8	1798 aa		27.48	■■□□□ 1.99
ARHGEF1-223	ENST00000617585	LDHC	P07864	332 aa		27.47	■■□□□ 1.99
ARHGEF1-223	ENST00000617585	BTD	P43251	543 aa		27.47	■■□□□ 1.99
ARHGEF1-223	ENST00000617585	RGS3	P49796	1198 aa		27.47	■■□□□ 1.99
ARHGEF1-223	ENST00000617585	RHBDL3	P58872	404 aa		27.47	■■□□□ 1.99
ARHGEF1-223	ENST00000617585	GSTO1	P78417	241 aa		27.47	■■□□□ 1.99
ARHGEF1-223	ENST00000617585	PKN2	Q16513	984 aa	Known RBP	27.47	■■□□□ 1.99
ARHGEF1-223	ENST00000617585	TBC1D9	Q6ZT07	1266 aa		27.47	■■□□□ 1.99
ARHGEF1-223	ENST00000617585	MIGA2	Q7L4E1	593 aa		27.47	■■□□□ 1.99
ARHGEF1-223	ENST00000617585	ZFPM1	Q8IX07	1006 aa		27.47	■■□□□ 1.99
ARHGEF1-223	ENST00000617585	ZKSCAN4	Q969J2	545 aa	Predicted RBP	27.47	■■□□□ 1.99
ARHGEF1-223	ENST00000617585	ZBTB40	Q9NUA8	1239 aa		27.47	■■□□□ 1.99
ARHGEF1-223	ENST00000617585	FKTN	O75072	461 aa		27.46	■■□□□ 1.99
ARHGEF1-223	ENST00000617585	DBNL	Q9UJU6	430 aa	Known RBP	27.46	■■□□□ 1.99
ARHGEF1-223	ENST00000617585	TTC39A	Q5SRH9	613 aa		27.45	■■□□□ 1.98
ARHGEF1-223	ENST00000617585	NOL9	Q5SY16	702 aa	Known RBP	27.45	■■□□□ 1.98
ARHGEF1-223	ENST00000617585	ERC1	Q8IUD2	1116 aa		27.45	■■□□□ 1.98
ARHGEF1-223	ENST00000617585	RPAP2	Q8IXW5	612 aa	Predicted RBP	27.45	■■□□□ 1.98
ARHGEF1-223	ENST00000617585	BRI3BP	Q8WY22	251 aa		27.45	■■□□□ 1.98
ARHGEF1-223	ENST00000617585	EAF2	Q96CJ1	260 aa	Predicted RBP	27.45	■■□□□ 1.98
ARHGEF1-223	ENST00000617585	OTUD5	Q96G74	571 aa		27.45	■■□□□ 1.98

Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms