RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 GUCA1BQ9UMX6 200 aa7.62□□□□□ -1.19
LMO3-235ENST00000616247 FPGT-TNNI3KV9GXZ4 949 aa7.62□□□□□ -1.19
LMO3-235ENST00000616247 NEXMIFQ5QGS0 1516 aa7.62□□□□□ -1.19
LMO3-235ENST00000616247 AKR1B15C9JRZ8 316 aaPredicted RBP7.61□□□□□ -1.19
LMO3-235ENST00000616247 CUTAO60888 179 aa7.61□□□□□ -1.19
LMO3-235ENST00000616247 CCT6AP40227 531 aaKnown RBP7.61□□□□□ -1.19
LMO3-235ENST00000616247 CCT5P48643 541 aa7.61□□□□□ -1.19
LMO3-235ENST00000616247 ATL3Q6DD88 541 aa7.61□□□□□ -1.19
LMO3-235ENST00000616247 IGSF22Q8N9C0 903 aa7.61□□□□□ -1.19
LMO3-235ENST00000616247 MYCBPQ99417 103 aaPredicted RBP7.61□□□□□ -1.19
LMO3-235ENST00000616247 KCNH3Q9ULD8 1083 aa7.61□□□□□ -1.19
LMO3-235ENST00000616247 PPLO60437 1756 aa7.61□□□□□ -1.19
LMO3-235ENST00000616247 ARHGEF10O15013 1369 aa7.61□□□□□ -1.19
LMO3-235ENST00000616247 KIF28PB7ZC32 967 aa7.61□□□□□ -1.19
LMO3-235ENST00000616247 ENC1O14682 589 aa7.61□□□□□ -1.19
LMO3-235ENST00000616247 YEATS4O95619 227 aa7.61□□□□□ -1.19
LMO3-235ENST00000616247 FDPSP14324 419 aaKnown RBP7.61□□□□□ -1.19
LMO3-235ENST00000616247 CMA1P23946 247 aa7.61□□□□□ -1.19
LMO3-235ENST00000616247 HDGFP51858 240 aaKnown RBP7.61□□□□□ -1.19
LMO3-235ENST00000616247 PDE4BQ07343 736 aa7.61□□□□□ -1.19
LMO3-235ENST00000616247 NCAPH2Q6IBW4 605 aa7.61□□□□□ -1.19
LMO3-235ENST00000616247 COPS6Q7L5N1 327 aa7.61□□□□□ -1.19
LMO3-235ENST00000616247 ACRBPQ8NEB7 543 aa7.61□□□□□ -1.19
LMO3-235ENST00000616247 AFAP1L1Q8TED9 768 aa7.61□□□□□ -1.19
LMO3-235ENST00000616247 RBM33Q96EV2 1170 aaKnown RBP7.61□□□□□ -1.19
LMO3-235ENST00000616247 MYL10Q9BUA6 226 aa7.61□□□□□ -1.19
LMO3-235ENST00000616247 GBP3Q9H0R5 595 aa7.61□□□□□ -1.19
LMO3-235ENST00000616247 CDC23Q9UJX2 597 aa7.61□□□□□ -1.19
LMO3-235ENST00000616247 AKAP2Q9Y2D5 859 aa7.61□□□□□ -1.19
LMO3-235ENST00000616247 USP42Q9H9J4 1324 aaKnown RBP7.61□□□□□ -1.19
LMO3-235ENST00000616247 IKBKBO14920 756 aa7.61□□□□□ -1.19
LMO3-235ENST00000616247 POLR2DO15514 142 aaKnown RBP7.61□□□□□ -1.19
LMO3-235ENST00000616247 STX10O60499 249 aa7.61□□□□□ -1.19
LMO3-235ENST00000616247 RNF40O75150 1001 aa7.61□□□□□ -1.19
LMO3-235ENST00000616247 IFIT1P09914 478 aaKnown RBP7.61□□□□□ -1.19
LMO3-235ENST00000616247 HOXC9P31274 260 aa7.61□□□□□ -1.19
LMO3-235ENST00000616247 MATR3P43243 847 aaKnown RBP eCLIP7.61□□□□□ -1.19
LMO3-235ENST00000616247 NBPF6Q5VWK0 638 aa7.61□□□□□ -1.19
LMO3-235ENST00000616247 GSPT2Q8IYD1 628 aaKnown RBP7.61□□□□□ -1.19
LMO3-235ENST00000616247 XAGE3Q8WTP9 111 aa7.61□□□□□ -1.19
LMO3-235ENST00000616247 STAMQ92783 540 aa7.61□□□□□ -1.19
LMO3-235ENST00000616247 SECISBP2LQ93073 1101 aaKnown RBP7.61□□□□□ -1.19
LMO3-235ENST00000616247 NBPF4Q96M43 638 aa7.61□□□□□ -1.19
LMO3-235ENST00000616247 POLD4Q9HCU8 107 aa7.61□□□□□ -1.19
LMO3-235ENST00000616247 NPHP4O75161 1426 aaPredicted RBP7.61□□□□□ -1.19
LMO3-235ENST00000616247 A0A087WZG4 1122 aa7.6□□□□□ -1.19
LMO3-235ENST00000616247 TEX33O43247 280 aa7.6□□□□□ -1.19
LMO3-235ENST00000616247 MRPS25P82663 173 aaKnown RBP7.6□□□□□ -1.19
LMO3-235ENST00000616247 SETQ01105 290 aaPredicted RBP7.6□□□□□ -1.19
LMO3-235ENST00000616247 IMMTQ16891 758 aaKnown RBP7.6□□□□□ -1.19
LMO3-235ENST00000616247 FILIP1LQ4L180 1135 aa7.6□□□□□ -1.19
LMO3-235ENST00000616247 VPS37DQ86XT2 251 aa7.6□□□□□ -1.19
LMO3-235ENST00000616247 CCDC148Q8NFR7 591 aa7.6□□□□□ -1.19
LMO3-235ENST00000616247 NUP88Q99567 741 aaPredicted RBP7.6□□□□□ -1.19
LMO3-235ENST00000616247 SLF1Q9BQI6 1058 aa7.6□□□□□ -1.19
LMO3-235ENST00000616247 FAM107BQ9H098 131 aa7.6□□□□□ -1.19
LMO3-235ENST00000616247 PAG1Q9NWQ8 432 aa7.6□□□□□ -1.19
LMO3-235ENST00000616247 DLG5Q8TDM6 1919 aa7.6□□□□□ -1.19
LMO3-235ENST00000616247 MROH7-TTC4A0A0A0MT08 1334 aa7.6□□□□□ -1.19
LMO3-235ENST00000616247 ERLIN2O94905 339 aa7.6□□□□□ -1.19
LMO3-235ENST00000616247 HSPD1P10809 573 aaKnown RBP7.6□□□□□ -1.19
LMO3-235ENST00000616247 ATP5JP18859 108 aa7.6□□□□□ -1.19
LMO3-235ENST00000616247 CDC27P30260 824 aa7.6□□□□□ -1.19
LMO3-235ENST00000616247 RRP12Q5JTH9 1297 aaKnown RBP7.6□□□□□ -1.19
LMO3-235ENST00000616247 BEND6Q5SZJ8 279 aaPredicted RBP7.6□□□□□ -1.19
LMO3-235ENST00000616247 LRRC31Q6UY01 552 aa7.6□□□□□ -1.19
LMO3-235ENST00000616247 RSRC2Q7L4I2 434 aaKnown RBP7.6□□□□□ -1.19
LMO3-235ENST00000616247 GPIHBP1Q8IV16 184 aa7.6□□□□□ -1.19
LMO3-235ENST00000616247 TC2NQ8N9U0 490 aa7.6□□□□□ -1.19
LMO3-235ENST00000616247 SAMM50Q9Y512 469 aa7.6□□□□□ -1.19
LMO3-235ENST00000616247 IGSF1Q8N6C5 1336 aa7.6□□□□□ -1.19
LMO3-235ENST00000616247 MED23Q9ULK4 1368 aa7.6□□□□□ -1.19
LMO3-235ENST00000616247 POTEB2H3BUK9 544 aa7.59□□□□□ -1.19
LMO3-235ENST00000616247 EBAG9O00559 213 aa7.59□□□□□ -1.19
LMO3-235ENST00000616247 GUCY2CP25092 1073 aa7.59□□□□□ -1.19
LMO3-235ENST00000616247 KCNJ6P48051 423 aa7.59□□□□□ -1.19
LMO3-235ENST00000616247 RBL2Q08999 1139 aa7.59□□□□□ -1.19
LMO3-235ENST00000616247 LMBR1LQ6UX01 489 aa7.59□□□□□ -1.19
LMO3-235ENST00000616247 EP400NLQ6ZTU2 488 aa7.59□□□□□ -1.19
LMO3-235ENST00000616247 BRAPQ7Z569 592 aa7.59□□□□□ -1.19
LMO3-235ENST00000616247 SMYD4Q8IYR2 804 aaPredicted RBP7.59□□□□□ -1.19
LMO3-235ENST00000616247 KBTBD3Q8NAB2 608 aa7.59□□□□□ -1.19
LMO3-235ENST00000616247 NOA1Q8NC60 698 aaKnown RBP7.59□□□□□ -1.19
LMO3-235ENST00000616247 KAZALD1Q96I82 304 aa7.59□□□□□ -1.19
LMO3-235ENST00000616247 MKRN1Q9UHC7 482 aaKnown RBP7.59□□□□□ -1.19
LMO3-235ENST00000616247 CDC42BPGQ6DT37 1551 aa7.59□□□□□ -1.19
LMO3-235ENST00000616247 CASP1P29466 404 aa7.59□□□□□ -1.19
LMO3-235ENST00000616247 FMR1Q06787 632 aaKnown RBP eCLIP7.59□□□□□ -1.19
LMO3-235ENST00000616247 SAFBQ15424 915 aaKnown RBP eCLIP7.59□□□□□ -1.19
LMO3-235ENST00000616247 TTC39AQ5SRH9 613 aa7.59□□□□□ -1.19
LMO3-235ENST00000616247 FBXW10Q5XX13 1052 aa7.59□□□□□ -1.19
LMO3-235ENST00000616247 SHC4Q6S5L8 630 aa7.59□□□□□ -1.19
LMO3-235ENST00000616247 RAD9BQ6WBX8 426 aa7.59□□□□□ -1.19
LMO3-235ENST00000616247 REM2Q8IYK8 340 aaPredicted RBP7.59□□□□□ -1.19
LMO3-235ENST00000616247 PCMTD1Q96MG8 357 aaPredicted RBP7.59□□□□□ -1.19
LMO3-235ENST00000616247 NAPGQ99747 312 aaPredicted RBP7.59□□□□□ -1.19
LMO3-235ENST00000616247 SLC26A6Q9BXS9 759 aa7.59□□□□□ -1.19
LMO3-235ENST00000616247 VPS16Q9H269 839 aa7.59□□□□□ -1.19
LMO3-235ENST00000616247 ANKZF1Q9H8Y5 726 aa7.59□□□□□ -1.19
LMO3-235ENST00000616247 KCND1Q9NSA2 647 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms