RNA–Protein interactions for RNA: ENST00000614703.4

SNX9-202, Transcript of sorting nexin 9, humanhuman

TSL 4

Gene SNX9, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-202ENST00000614703 CAVIN4Q5BKX8 364 aa12.19□□□□□ -0.46
SNX9-202ENST00000614703 LMBR1LQ6UX01 489 aa12.19□□□□□ -0.46
SNX9-202ENST00000614703 G2E3Q7L622 706 aa12.19□□□□□ -0.46
SNX9-202ENST00000614703 FAM84BQ96KN1 310 aaPredicted RBP12.19□□□□□ -0.46
SNX9-202ENST00000614703 AK9Q5TCS8 1911 aa12.18□□□□□ -0.46
SNX9-202ENST00000614703 GYG1P46976 350 aa12.18□□□□□ -0.46
SNX9-202ENST00000614703 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.18□□□□□ -0.46
SNX9-202ENST00000614703 ZDHHC15Q96MV8 337 aa12.18□□□□□ -0.46
SNX9-202ENST00000614703 KCNH4Q9UQ05 1017 aa12.18□□□□□ -0.46
SNX9-202ENST00000614703 MROH5Q6ZUA9 1318 aa12.17□□□□□ -0.46
SNX9-202ENST00000614703 ECM2O94769 699 aaPredicted RBP12.17□□□□□ -0.46
SNX9-202ENST00000614703 TFRCP02786 760 aaKnown RBP12.17□□□□□ -0.46
SNX9-202ENST00000614703 PXYLP1Q8TE99 480 aa12.17□□□□□ -0.46
SNX9-202ENST00000614703 TSR2Q969E8 191 aaKnown RBP12.17□□□□□ -0.46
SNX9-202ENST00000614703 ADGRA2Q96PE1 1338 aa12.16□□□□□ -0.46
SNX9-202ENST00000614703 GRM8O00222 908 aa12.16□□□□□ -0.46
SNX9-202ENST00000614703 CXCL11O14625 94 aa12.16□□□□□ -0.46
SNX9-202ENST00000614703 ADCY3O60266 1144 aa12.16□□□□□ -0.46
SNX9-202ENST00000614703 CTGFP29279 349 aa12.16□□□□□ -0.46
SNX9-202ENST00000614703 BMP8BP34820 402 aa12.16□□□□□ -0.46
SNX9-202ENST00000614703 PRKCZQ05513 592 aa12.16□□□□□ -0.46
SNX9-202ENST00000614703 CHAF1AQ13111 956 aaPredicted RBP12.16□□□□□ -0.46
SNX9-202ENST00000614703 CCDC27Q2M243 656 aa12.16□□□□□ -0.46
SNX9-202ENST00000614703 HHIPL2Q6UWX4 724 aa12.16□□□□□ -0.46
SNX9-202ENST00000614703 FASTKD5Q7L8L6 764 aaKnown RBP12.16□□□□□ -0.46
SNX9-202ENST00000614703 ZNF594Q96JF6 807 aaPredicted RBP12.16□□□□□ -0.46
SNX9-202ENST00000614703 C9orf78Q9NZ63 289 aaPredicted RBP12.16□□□□□ -0.46
SNX9-202ENST00000614703 IL16Q14005 1332 aa12.15□□□□□ -0.46
SNX9-202ENST00000614703 BCRP11274 1271 aa12.15□□□□□ -0.46
SNX9-202ENST00000614703 CACNB3P54284 484 aa12.15□□□□□ -0.46
SNX9-202ENST00000614703 IRF5Q13568 498 aa12.15□□□□□ -0.46
SNX9-202ENST00000614703 NECAB2Q7Z6G3 386 aa12.15□□□□□ -0.46
SNX9-202ENST00000614703 FBXO33Q7Z6M2 555 aa12.15□□□□□ -0.46
SNX9-202ENST00000614703 FAM151AQ8WW52 585 aa12.15□□□□□ -0.46
SNX9-202ENST00000614703 UNC93B1Q9H1C4 597 aa12.15□□□□□ -0.46
SNX9-202ENST00000614703 ZNF112Q9UJU3 913 aa12.15□□□□□ -0.46
SNX9-202ENST00000614703 INPP5BP32019 993 aa12.14□□□□□ -0.47
SNX9-202ENST00000614703 DDX10Q13206 875 aaKnown RBP12.14□□□□□ -0.47
SNX9-202ENST00000614703 NOL9Q5SY16 702 aaKnown RBP12.14□□□□□ -0.47
SNX9-202ENST00000614703 BEND3Q5T5X7 828 aa12.14□□□□□ -0.47
SNX9-202ENST00000614703 APOBEC3HQ6NTF7 200 aaKnown RBP12.14□□□□□ -0.47
SNX9-202ENST00000614703 MIGA2Q7L4E1 593 aa12.14□□□□□ -0.47
SNX9-202ENST00000614703 ANKLE1Q8NAG6 615 aa12.14□□□□□ -0.47
SNX9-202ENST00000614703 LRCH3Q96II8 777 aa12.14□□□□□ -0.47
SNX9-202ENST00000614703 DEFB118Q96PH6 123 aa12.14□□□□□ -0.47
SNX9-202ENST00000614703 STAP2Q9UGK3 403 aa12.14□□□□□ -0.47
SNX9-202ENST00000614703 STXBP5LQ9Y2K9 1186 aa12.14□□□□□ -0.47
SNX9-202ENST00000614703 SLC45A1Q9Y2W3 748 aa12.14□□□□□ -0.47
SNX9-202ENST00000614703 UNC80Q8N2C7 3258 aa12.13□□□□□ -0.47
SNX9-202ENST00000614703 SOX1O00570 391 aaPredicted RBP12.13□□□□□ -0.47
SNX9-202ENST00000614703 TNPO2O14787 897 aaKnown RBP12.13□□□□□ -0.47
SNX9-202ENST00000614703 ALDH1L1O75891 902 aa12.13□□□□□ -0.47
SNX9-202ENST00000614703 INHAP05111 366 aa12.13□□□□□ -0.47
SNX9-202ENST00000614703 FLT3LGP49771 235 aa12.13□□□□□ -0.47
SNX9-202ENST00000614703 DEFB123Q8N688 67 aa12.13□□□□□ -0.47
SNX9-202ENST00000614703 COA7Q96BR5 231 aa12.13□□□□□ -0.47
SNX9-202ENST00000614703 KIF16BQ96L93 1317 aa12.12□□□□□ -0.47
SNX9-202ENST00000614703 ZEB1P37275 1124 aaPredicted RBP12.12□□□□□ -0.47
SNX9-202ENST00000614703 BCAMP50895 628 aa12.12□□□□□ -0.47
SNX9-202ENST00000614703 LRIT3Q3SXY7 679 aa12.12□□□□□ -0.47
SNX9-202ENST00000614703 NCBP3Q53F19 620 aaKnown RBP12.12□□□□□ -0.47
SNX9-202ENST00000614703 METTL24Q5JXM2 366 aa12.12□□□□□ -0.47
SNX9-202ENST00000614703 EPHA10Q5JZY3 1008 aa12.12□□□□□ -0.47
SNX9-202ENST00000614703 WDR66Q8TBY9 1149 aa12.12□□□□□ -0.47
SNX9-202ENST00000614703 SMCR8Q8TEV9 937 aaPredicted RBP12.12□□□□□ -0.47
SNX9-202ENST00000614703 PAWRQ96IZ0 340 aaKnown RBP12.12□□□□□ -0.47
SNX9-202ENST00000614703 GDF15Q99988 308 aa12.12□□□□□ -0.47
SNX9-202ENST00000614703 CRISPLD2Q9H0B8 497 aa12.12□□□□□ -0.47
SNX9-202ENST00000614703 PAK6Q9NQU5 681 aaPredicted RBP12.12□□□□□ -0.47
SNX9-202ENST00000614703 PICK1Q9NRD5 415 aa12.12□□□□□ -0.47
SNX9-202ENST00000614703 GABRQQ9UN88 632 aa12.12□□□□□ -0.47
SNX9-202ENST00000614703 IQSEC3Q9UPP2 1182 aaPredicted RBP12.12□□□□□ -0.47
SNX9-202ENST00000614703 MYH13Q9UKX3 1938 aa12.11□□□□□ -0.47
SNX9-202ENST00000614703 IFIT1P09914 478 aaKnown RBP12.11□□□□□ -0.47
SNX9-202ENST00000614703 CYP2C8P10632 490 aa12.11□□□□□ -0.47
SNX9-202ENST00000614703 MOGSQ13724 837 aa12.11□□□□□ -0.47
SNX9-202ENST00000614703 GRIK5Q16478 980 aa12.11□□□□□ -0.47
SNX9-202ENST00000614703 GPAT2Q6NUI2 795 aa12.11□□□□□ -0.47
SNX9-202ENST00000614703 WWC1Q8IX03 1113 aa12.11□□□□□ -0.47
SNX9-202ENST00000614703 PRKRIP1Q9H875 184 aaPredicted RBP12.11□□□□□ -0.47
SNX9-202ENST00000614703 A0A0G2JLL6 359 aaPredicted RBP12.1□□□□□ -0.47
SNX9-202ENST00000614703 F6X3S4 739 aa12.1□□□□□ -0.47
SNX9-202ENST00000614703 PDE8BO95263 885 aa12.1□□□□□ -0.47
SNX9-202ENST00000614703 ELNP15502 786 aa12.1□□□□□ -0.47
SNX9-202ENST00000614703 PRRT2Q7Z6L0 340 aaPredicted RBP12.1□□□□□ -0.47
SNX9-202ENST00000614703 TDHQ8IZJ6 230 aa12.1□□□□□ -0.47
SNX9-202ENST00000614703 PUS3Q9BZE2 481 aaKnown RBP12.1□□□□□ -0.47
SNX9-202ENST00000614703 SRCIN1Q9C0H9 1055 aa12.1□□□□□ -0.47
SNX9-202ENST00000614703 NBPF3Q9H094 633 aa12.1□□□□□ -0.47
SNX9-202ENST00000614703 PNMA3Q9UL41 463 aa12.1□□□□□ -0.47
SNX9-202ENST00000614703 ALPK3Q96L96 1907 aa12.09□□□□□ -0.47
SNX9-202ENST00000614703 VAMP4O75379 141 aa12.09□□□□□ -0.47
SNX9-202ENST00000614703 TCP10Q12799 353 aa12.09□□□□□ -0.47
SNX9-202ENST00000614703 GADL1Q6ZQY3 521 aa12.09□□□□□ -0.47
SNX9-202ENST00000614703 C7orf61Q8IZ16 206 aa12.09□□□□□ -0.47
SNX9-202ENST00000614703 SCYL3Q8IZE3 742 aa12.09□□□□□ -0.47
SNX9-202ENST00000614703 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.09□□□□□ -0.474e-10■■■■■ 30.5
SNX9-202ENST00000614703 TAOK2Q9UL54 1235 aa12.09□□□□□ -0.47
SNX9-202ENST00000614703 ZHX2Q9Y6X8 837 aa12.09□□□□□ -0.47
SNX9-202ENST00000614703 DOCK3Q8IZD9 2030 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms