RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 IRS4O14654 1257 aaPredicted RBP19.53■□□□□ 0.72
HMGXB3-206ENST00000613459 MCM7P33993 719 aa19.53■□□□□ 0.72
HMGXB3-206ENST00000613459 INSRP06213 1382 aa19.53■□□□□ 0.72
HMGXB3-206ENST00000613459 NPC1L1Q9UHC9 1359 aa19.53■□□□□ 0.72
HMGXB3-206ENST00000613459 GIGYF1O75420 1035 aaPredicted RBP19.53■□□□□ 0.72
HMGXB3-206ENST00000613459 LDHBP07195 334 aaKnown RBP19.53■□□□□ 0.72
HMGXB3-206ENST00000613459 CCDC122Q5T0U0 273 aa19.53■□□□□ 0.72
HMGXB3-206ENST00000613459 CYP26C1Q6V0L0 522 aa19.53■□□□□ 0.72
HMGXB3-206ENST00000613459 KRBA2Q6ZNG9 492 aa19.53■□□□□ 0.72
HMGXB3-206ENST00000613459 RGS22Q8NE09 1264 aa19.53■□□□□ 0.72
HMGXB3-206ENST00000613459 SEC62Q99442 399 aaKnown RBP19.53■□□□□ 0.72
HMGXB3-206ENST00000613459 NKIRAS1Q9NYS0 192 aa19.53■□□□□ 0.72
HMGXB3-206ENST00000613459 ZNF219Q9P2Y4 722 aaPredicted RBP19.53■□□□□ 0.72
HMGXB3-206ENST00000613459 ZNF518AQ6AHZ1 1483 aa19.53■□□□□ 0.72
HMGXB3-206ENST00000613459 CIB2O75838 187 aa19.53■□□□□ 0.72
HMGXB3-206ENST00000613459 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.53■□□□□ 0.72
HMGXB3-206ENST00000613459 JARID2Q92833 1246 aaPredicted RBP19.53■□□□□ 0.72
HMGXB3-206ENST00000613459 DKC1O60832 514 aaKnown RBP eCLIP19.52■□□□□ 0.72
HMGXB3-206ENST00000613459 SEC24BO95487 1268 aa19.52■□□□□ 0.72
HMGXB3-206ENST00000613459 EVCP57679 992 aa19.52■□□□□ 0.72
HMGXB3-206ENST00000613459 TFCP2Q12800 502 aa19.52■□□□□ 0.72
HMGXB3-206ENST00000613459 C10orf67Q8IYJ2 551 aa19.52■□□□□ 0.72
HMGXB3-206ENST00000613459 NAPGQ99747 312 aaPredicted RBP19.52■□□□□ 0.72
HMGXB3-206ENST00000613459 PPM1FP49593 454 aaPredicted RBP19.52■□□□□ 0.72
HMGXB3-206ENST00000613459 ATP11AP98196 1134 aa19.52■□□□□ 0.72
HMGXB3-206ENST00000613459 HAUS3Q68CZ6 603 aa19.52■□□□□ 0.72
HMGXB3-206ENST00000613459 CUTAO60888 179 aa19.52■□□□□ 0.72
HMGXB3-206ENST00000613459 ARID4AP29374 1257 aaPredicted RBP19.52■□□□□ 0.72
HMGXB3-206ENST00000613459 TMEM110-MUSTN1A8MSY1 372 aa19.52■□□□□ 0.71
HMGXB3-206ENST00000613459 MAP3K9P80192 1104 aa19.52■□□□□ 0.71
HMGXB3-206ENST00000613459 A0A1B0GUA9 196 aa19.51■□□□□ 0.71
HMGXB3-206ENST00000613459 ACTN4O43707 911 aaKnown RBP19.51■□□□□ 0.71
HMGXB3-206ENST00000613459 INTS8Q75QN2 995 aaKnown RBP19.51■□□□□ 0.71
HMGXB3-206ENST00000613459 MLKLQ8NB16 471 aa19.51■□□□□ 0.71
HMGXB3-206ENST00000613459 PCDH11XQ9BZA7 1347 aa19.51■□□□□ 0.71
HMGXB3-206ENST00000613459 PCDH11YQ9BZA8 1340 aa19.51■□□□□ 0.71
HMGXB3-206ENST00000613459 CLSTN2Q9H4D0 955 aa19.51■□□□□ 0.71
HMGXB3-206ENST00000613459 DDX21Q9NR30 783 aaKnown RBP eCLIP19.51■□□□□ 0.71
HMGXB3-206ENST00000613459 FAM169AQ9Y6X4 670 aa19.51■□□□□ 0.71
HMGXB3-206ENST00000613459 GABPB1Q06547 395 aaPredicted RBP19.51■□□□□ 0.71
HMGXB3-206ENST00000613459 C16orf71Q8IYS4 520 aaPredicted RBP19.51■□□□□ 0.71
HMGXB3-206ENST00000613459 ZC3H12CQ9C0D7 883 aaKnown RBP19.51■□□□□ 0.71
HMGXB3-206ENST00000613459 PA2G4Q9UQ80 394 aaKnown RBP19.51■□□□□ 0.71
HMGXB3-206ENST00000613459 MRPS9P82933 396 aaKnown RBP19.51■□□□□ 0.71
HMGXB3-206ENST00000613459 TRMT1LQ7Z2T5 733 aaKnown RBP19.51■□□□□ 0.71
HMGXB3-206ENST00000613459 KCNK9Q9NPC2 374 aa19.51■□□□□ 0.71
HMGXB3-206ENST00000613459 SNX16P57768 344 aa19.51■□□□□ 0.71
HMGXB3-206ENST00000613459 PICALMQ13492 652 aa19.51■□□□□ 0.71
HMGXB3-206ENST00000613459 CALUO43852 315 aaPredicted RBP19.5■□□□□ 0.71
HMGXB3-206ENST00000613459 GAS8O95995 478 aa19.5■□□□□ 0.71
HMGXB3-206ENST00000613459 ARID5AQ03989 594 aa19.5■□□□□ 0.71
HMGXB3-206ENST00000613459 CHRNA2Q15822 529 aa19.5■□□□□ 0.71
HMGXB3-206ENST00000613459 PARP10Q53GL7 1025 aa19.5■□□□□ 0.71
HMGXB3-206ENST00000613459 STMN2Q93045 179 aa19.5■□□□□ 0.71
HMGXB3-206ENST00000613459 TSKSQ9UJT2 592 aa19.5■□□□□ 0.71
HMGXB3-206ENST00000613459 WDR44Q5JSH3 913 aa19.5■□□□□ 0.71
HMGXB3-206ENST00000613459 UBLCP1Q8WVY7 318 aaPredicted RBP19.5■□□□□ 0.71
HMGXB3-206ENST00000613459 WDR7Q9Y4E6 1490 aa19.5■□□□□ 0.71
HMGXB3-206ENST00000613459 NOC4LQ9BVI4 516 aaKnown RBP19.5■□□□□ 0.71
HMGXB3-206ENST00000613459 DNAJC5BQ9UF47 199 aa19.5■□□□□ 0.71
HMGXB3-206ENST00000613459 EXOC7Q9UPT5 735 aa19.5■□□□□ 0.71
HMGXB3-206ENST00000613459 STX17P56962 302 aa19.5■□□□□ 0.71
HMGXB3-206ENST00000613459 SLC4A8Q2Y0W8 1093 aa19.49■□□□□ 0.71
HMGXB3-206ENST00000613459 ANO1Q5XXA6 986 aa19.49■□□□□ 0.71
HMGXB3-206ENST00000613459 GABPB2Q8TAK5 448 aaPredicted RBP19.49■□□□□ 0.71
HMGXB3-206ENST00000613459 ZNF354CQ86Y25 554 aa19.49■□□□□ 0.71
HMGXB3-206ENST00000613459 KIF24Q5T7B8 1368 aa19.49■□□□□ 0.71
HMGXB3-206ENST00000613459 ATP10BO94823 1461 aa19.49■□□□□ 0.71
HMGXB3-206ENST00000613459 SHANK2Q9UPX8 1470 aa19.49■□□□□ 0.71
HMGXB3-206ENST00000613459 SIRT1Q96EB6 747 aa19.49■□□□□ 0.71
HMGXB3-206ENST00000613459 GTF3C6Q969F1 213 aa19.49■□□□□ 0.71
HMGXB3-206ENST00000613459 TCOF1Q13428 1488 aaKnown RBP19.49■□□□□ 0.71
HMGXB3-206ENST00000613459 SLC39A6Q13433 755 aa19.49■□□□□ 0.71
HMGXB3-206ENST00000613459 DDB1Q16531 1140 aa19.49■□□□□ 0.71
HMGXB3-206ENST00000613459 ERCC6LQ2NKX8 1250 aa19.49■□□□□ 0.71
HMGXB3-206ENST00000613459 LZTS2Q9BRK4 669 aa19.49■□□□□ 0.71
HMGXB3-206ENST00000613459 MAK16Q9BXY0 300 aaKnown RBP19.49■□□□□ 0.71
HMGXB3-206ENST00000613459 INF2Q27J81 1249 aa19.48■□□□□ 0.71
HMGXB3-206ENST00000613459 LMNTD2Q8IXW0 634 aa19.48■□□□□ 0.71
HMGXB3-206ENST00000613459 MAST3O60307 1309 aa19.48■□□□□ 0.71
HMGXB3-206ENST00000613459 IGSF22Q8N9C0 903 aa19.48■□□□□ 0.71
HMGXB3-206ENST00000613459 RNMTO43148 476 aaKnown RBP19.48■□□□□ 0.71
HMGXB3-206ENST00000613459 GBP1P32455 592 aa19.48■□□□□ 0.71
HMGXB3-206ENST00000613459 PSMC4P43686 418 aa19.48■□□□□ 0.71
HMGXB3-206ENST00000613459 CFAP157Q5JU67 520 aa19.48■□□□□ 0.71
HMGXB3-206ENST00000613459 LIN9Q5TKA1 542 aa19.48■□□□□ 0.71
HMGXB3-206ENST00000613459 CACNA2D3Q8IZS8 1091 aa19.48■□□□□ 0.71
HMGXB3-206ENST00000613459 GJC1P36383 396 aa19.48■□□□□ 0.71
HMGXB3-206ENST00000613459 TPD52P55327 224 aaPredicted RBP19.48■□□□□ 0.71
HMGXB3-206ENST00000613459 EYA2O00167 538 aa19.47■□□□□ 0.71
HMGXB3-206ENST00000613459 TBC1D8BQ0IIM8 1120 aa19.47■□□□□ 0.71
HMGXB3-206ENST00000613459 DNAJC21Q5F1R6 531 aaKnown RBP19.47■□□□□ 0.71
HMGXB3-206ENST00000613459 FCHSD1Q86WN1 690 aa19.47■□□□□ 0.71
HMGXB3-206ENST00000613459 TMTC1Q8IUR5 882 aa19.47■□□□□ 0.71
HMGXB3-206ENST00000613459 CDCA7Q9BWT1 371 aaPredicted RBP19.47■□□□□ 0.71
HMGXB3-206ENST00000613459 CPSF2Q9P2I0 782 aaKnown RBP19.47■□□□□ 0.71
HMGXB3-206ENST00000613459 SMIM23A6NLE4 172 aa19.47■□□□□ 0.71
HMGXB3-206ENST00000613459 ERCC5P28715 1186 aaPredicted RBP19.47■□□□□ 0.71
HMGXB3-206ENST00000613459 SMTNP53814 917 aa19.47■□□□□ 0.71
HMGXB3-206ENST00000613459 NAA25Q14CX7 972 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms