RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 GAKO14976 1311 aa20.92■□□□□ 0.94
SREK1-216ENST00000612404 MYO3BQ8WXR4 1341 aa20.92■□□□□ 0.94
SREK1-216ENST00000612404 CIAPIN1Q6FI81 312 aa20.92■□□□□ 0.94
SREK1-216ENST00000612404 IFNL3Q8IZI9 196 aa20.92■□□□□ 0.94
SREK1-216ENST00000612404 TEKT1Q969V4 418 aa20.92■□□□□ 0.94
SREK1-216ENST00000612404 NAPBQ9H115 298 aa20.92■□□□□ 0.94
SREK1-216ENST00000612404 GPR75-ASB3A0A0A6YYF3 556 aa20.92■□□□□ 0.94
SREK1-216ENST00000612404 CYP21A2P08686 494 aa20.92■□□□□ 0.94
SREK1-216ENST00000612404 LMNB1P20700 586 aa20.92■□□□□ 0.94
SREK1-216ENST00000612404 TDO2P48775 406 aa20.92■□□□□ 0.94
SREK1-216ENST00000612404 SH3RF3Q8TEJ3 882 aaPredicted RBP20.92■□□□□ 0.94
SREK1-216ENST00000612404 EPB41L4AQ9HCS5 686 aaPredicted RBP20.92■□□□□ 0.94
SREK1-216ENST00000612404 ZBTB12Q9Y330 459 aaPredicted RBP20.92■□□□□ 0.94
SREK1-216ENST00000612404 CRKP46108 304 aa20.91■□□□□ 0.94
SREK1-216ENST00000612404 RBM5P52756 815 aaKnown RBP eCLIP20.91■□□□□ 0.94
SREK1-216ENST00000612404 PPP4CP60510 307 aa20.91■□□□□ 0.94
SREK1-216ENST00000612404 HAND2P61296 217 aa20.9■□□□□ 0.94
SREK1-216ENST00000612404 TNIP1Q15025 636 aa20.9■□□□□ 0.94
SREK1-216ENST00000612404 IMMTQ16891 758 aaKnown RBP20.9■□□□□ 0.94
SREK1-216ENST00000612404 HHIPL2Q6UWX4 724 aa20.9■□□□□ 0.94
SREK1-216ENST00000612404 CERS3Q8IU89 383 aa20.9■□□□□ 0.94
SREK1-216ENST00000612404 KCNB2Q92953 911 aa20.9■□□□□ 0.94
SREK1-216ENST00000612404 TAF6LQ9Y6J9 622 aa20.9■□□□□ 0.94
SREK1-216ENST00000612404 EIF6P56537 245 aaKnown RBP20.9■□□□□ 0.94
SREK1-216ENST00000612404 RABEP1Q15276 862 aa20.9■□□□□ 0.94
SREK1-216ENST00000612404 ALX1Q15699 326 aa20.9■□□□□ 0.94
SREK1-216ENST00000612404 GPR162Q16538 588 aa20.9■□□□□ 0.94
SREK1-216ENST00000612404 RPAP1Q9BWH6 1393 aaPredicted RBP20.9■□□□□ 0.94
SREK1-216ENST00000612404 ZNF213O14771 459 aa20.89■□□□□ 0.94
SREK1-216ENST00000612404 PLCG2P16885 1265 aa20.89■□□□□ 0.94
SREK1-216ENST00000612404 DDRGK1Q96HY6 314 aa20.89■□□□□ 0.94
SREK1-216ENST00000612404 USP5P45974 858 aa20.89■□□□□ 0.93
SREK1-216ENST00000612404 ADAMTSL1Q8N6G6 1762 aa20.89■□□□□ 0.93
SREK1-216ENST00000612404 FZD9O00144 591 aa20.88■□□□□ 0.93
SREK1-216ENST00000612404 HDLBPQ00341 1268 aaKnown RBP20.88■□□□□ 0.93
SREK1-216ENST00000612404 ADCK5Q3MIX3 580 aa20.88■□□□□ 0.93
SREK1-216ENST00000612404 TEX11Q8IYF3 940 aa20.88■□□□□ 0.93
SREK1-216ENST00000612404 OGFOD1Q8N543 542 aa20.88■□□□□ 0.93
SREK1-216ENST00000612404 AGBL3Q8NEM8 1001 aa20.88■□□□□ 0.93
SREK1-216ENST00000612404 JAKMIP1Q96N16 626 aaKnown RBP20.88■□□□□ 0.93
SREK1-216ENST00000612404 GMLQ99445 158 aa20.88■□□□□ 0.93
SREK1-216ENST00000612404 MRIQ9BWK5 157 aa20.88■□□□□ 0.93
SREK1-216ENST00000612404 SERPINA10Q9UK55 444 aa20.88■□□□□ 0.93
SREK1-216ENST00000612404 ZMYM6O95789 1325 aa20.88■□□□□ 0.93
SREK1-216ENST00000612404 ATP8A2Q9NTI2 1148 aa20.87■□□□□ 0.93
SREK1-216ENST00000612404 HDAC9Q9UKV0 1011 aa20.87■□□□□ 0.93
SREK1-216ENST00000612404 GJA3Q9Y6H8 435 aa20.87■□□□□ 0.93
SREK1-216ENST00000612404 CASTP20810 708 aaKnown RBP20.87■□□□□ 0.93
SREK1-216ENST00000612404 TGFBRAP1Q8WUH2 860 aa20.87■□□□□ 0.93
SREK1-216ENST00000612404 IL17RAQ96F46 866 aa20.87■□□□□ 0.93
SREK1-216ENST00000612404 ZDHHC15Q96MV8 337 aa20.87■□□□□ 0.93
SREK1-216ENST00000612404 UPF3BQ9BZI7 483 aaKnown RBP20.87■□□□□ 0.93
SREK1-216ENST00000612404 PCDHAC2Q9Y5I4 1007 aa20.87■□□□□ 0.93
SREK1-216ENST00000612404 RHBDL3P58872 404 aa20.86■□□□□ 0.93
SREK1-216ENST00000612404 KRT32Q14532 448 aa20.86■□□□□ 0.93
SREK1-216ENST00000612404 TSGA10IPQ3SY00 556 aa20.86■□□□□ 0.93
SREK1-216ENST00000612404 APOBEC3HQ6NTF7 200 aaKnown RBP20.86■□□□□ 0.93
SREK1-216ENST00000612404 DCP1AQ9NPI6 582 aaPredicted RBP20.86■□□□□ 0.93
SREK1-216ENST00000612404 SBF1O95248 1867 aa20.86■□□□□ 0.93
SREK1-216ENST00000612404 USP17L8P0C7I0 530 aa20.86■□□□□ 0.93
SREK1-216ENST00000612404 NEK4P51957 841 aa20.86■□□□□ 0.93
SREK1-216ENST00000612404 GIMAP6Q6P9H5 292 aa20.86■□□□□ 0.93
SREK1-216ENST00000612404 USP40Q9NVE5 1235 aa20.86■□□□□ 0.93
SREK1-216ENST00000612404 RNF181Q9P0P0 153 aa20.86■□□□□ 0.93
SREK1-216ENST00000612404 BAZ2AQ9UIF9 1905 aaKnown RBP20.86■□□□□ 0.93
SREK1-216ENST00000612404 CFAP100Q494V2 611 aa20.85■□□□□ 0.93
SREK1-216ENST00000612404 MAPKAPK5Q8IW41 473 aa20.85■□□□□ 0.93
SREK1-216ENST00000612404 ZNF541Q9H0D2 1346 aa20.85■□□□□ 0.93
SREK1-216ENST00000612404 DICER1Q9UPY3 1922 aaKnown RBP20.85■□□□□ 0.93
SREK1-216ENST00000612404 MINDY4BA8MYZ0 360 aa20.84■□□□□ 0.93
SREK1-216ENST00000612404 E7EWF7 191 aa20.84■□□□□ 0.93
SREK1-216ENST00000612404 PSMA5P28066 241 aa20.84■□□□□ 0.93
SREK1-216ENST00000612404 CDC42EP5Q6NZY7 148 aa20.84■□□□□ 0.93
SREK1-216ENST00000612404 STOX1Q6ZVD7 989 aa20.84■□□□□ 0.93
SREK1-216ENST00000612404 MCM9Q9NXL9 1143 aa20.84■□□□□ 0.93
SREK1-216ENST00000612404 CPA1P15085 419 aa20.83■□□□□ 0.93
SREK1-216ENST00000612404 CTDSPL2Q05D32 466 aa20.83■□□□□ 0.93
SREK1-216ENST00000612404 TM6SF1Q9BZW5 370 aa20.83■□□□□ 0.93
SREK1-216ENST00000612404 USP17L12C9JPN9 530 aa20.83■□□□□ 0.92
SREK1-216ENST00000612404 USP17L21D6R901 530 aa20.83■□□□□ 0.92
SREK1-216ENST00000612404 ST18O60284 1047 aa20.83■□□□□ 0.92
SREK1-216ENST00000612404 RPS12P25398 132 aaKnown RBP20.83■□□□□ 0.92
SREK1-216ENST00000612404 PPARAQ07869 468 aa20.83■□□□□ 0.92
SREK1-216ENST00000612404 CTR9Q6PD62 1173 aa20.83■□□□□ 0.92
SREK1-216ENST00000612404 STK11IPQ8N1F8 1099 aa20.83■□□□□ 0.92
SREK1-216ENST00000612404 NEK1Q96PY6 1258 aa20.83■□□□□ 0.92
SREK1-216ENST00000612404 NBPF3Q9H094 633 aa20.83■□□□□ 0.92
SREK1-216ENST00000612404 CYP46A1Q9Y6A2 500 aa20.83■□□□□ 0.92
SREK1-216ENST00000612404 LAMA4Q16363 1823 aa20.82■□□□□ 0.92
SREK1-216ENST00000612404 CDK5RAP2Q96SN8 1893 aa20.82■□□□□ 0.92
SREK1-216ENST00000612404 CYP2D7A0A087X1C5 515 aa20.82■□□□□ 0.92
SREK1-216ENST00000612404 GMPSP49915 693 aaPredicted RBP20.82■□□□□ 0.92
SREK1-216ENST00000612404 PICALMQ13492 652 aa20.82■□□□□ 0.92
SREK1-216ENST00000612404 DLGAP5Q15398 846 aa20.82■□□□□ 0.92
SREK1-216ENST00000612404 SLC4A8Q2Y0W8 1093 aa20.82■□□□□ 0.92
SREK1-216ENST00000612404 C9orf131Q5VYM1 1079 aa20.82■□□□□ 0.92
SREK1-216ENST00000612404 BLOC1S2Q6QNY1 142 aa20.82■□□□□ 0.92
SREK1-216ENST00000612404 TBC1D10CQ8IV04 446 aa20.82■□□□□ 0.92
SREK1-216ENST00000612404 ZSWIM6Q9HCJ5 1215 aa20.82■□□□□ 0.92
SREK1-216ENST00000612404 GRIN3BO60391 1043 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms